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The map label for this gene is parB

Identifier: 15594779

GI number: 15594779

Start: 451139

End: 451921

Strand: Reverse

Name: parB

Synonym: BB0434

Alternate gene names: 15594779

Gene position: 451921-451139 (Counterclockwise)

Preceding gene: 15594780

Following gene: 15594778

Centisome position: 49.62

GC content: 26.95

Gene sequence:

>783_bases
ATGGATGGAGTTTTTAAAATGATAGATATTCATCTTTTAGATATTGATAATGATCAGCCAAGGAAATCTGTTAGTCTTGT
TGAATTAGAAGAGCTAAGCATTTCTATAAAAGAAAATGGAATTTTGCAACCTTTAATTGTTTGTAAAGCAAATGATAGAT
ATAAAATAATAGTAGGAGAAAGAAGGTTTAGGGCTGCTAAACTTATTCAGTTGACAAATATTCCTGTCATAGAGGTTGAC
ATAAAAGAATCCTGTAAAGATTTTATGCCCTTGGTTGAAAATATTCAAAGAGAAAATTTTACTCCTGTTGAAGAGGCTTA
TGCCTATAAAAATATAATGAATAAATATTCGTTAACTCAAAAGGATTTATCTGAAAAAATTGGTAAAAGCAGGACCTATA
TTTCAAATTTAGTTAGAATTTTAGATCTTGAGCAAGAAATATTAAATGCAATACATAGAAAAGAAATTTCTTTTGGGCAT
GCTAAAGTTATTTTATCCTTAAAAGACAGGCAAGACAGGTATAATCTTTATTTAATTATACTTAAAAAAAAATTTTCTGT
AAGGGATGCAGAAAAATATGTTAAAAATTTTTCCAAATCCATAGTAAAAAAAAGAGAGCTAGAACAAGATCCTTTTTTAA
ATAATATAAAAGAATTTCTATTTGATAAAATCCAAACAAAAATAGATATCAAAGGGAATCAAAATAAAGGCAAAATAGAG
ATAGAGTATTTTACTGCTGGCGATTTAAAAAGGATTGTTTCCCTTTTTGGTCATAGTAGCTAA

Upstream 100 bases:

>100_bases
TTAAGAATGTTCCACGTGGAACATTCTTTTTTTTTATTCTTAAATTGTAATTCAATATTATAACCTGGTAAAATTTTGTG
TTGTAGGAGGTTTTGACAAT

Downstream 100 bases:

>100_bases
ATTATTTTTATAATTTAAAGATTGTAAAATATTTTATGAGAATTTTTATTTTTTAGGCATTTGTCACAATGCATAAATTT
TTTAAGCTTATTTTAAAATT

Product: stage 0 sporulation protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDGVFKMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIVGERRFRAAKLIQLTNIPVIEVD
IKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQKDLSEKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGH
AKVILSLKDRQDRYNLYLIILKKKFSVRDAEKYVKNFSKSIVKKRELEQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIE
IEYFTAGDLKRIVSLFGHSS

Sequences:

>Translated_260_residues
MDGVFKMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIVGERRFRAAKLIQLTNIPVIEVD
IKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQKDLSEKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGH
AKVILSLKDRQDRYNLYLIILKKKFSVRDAEKYVKNFSKSIVKKRELEQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIE
IEYFTAGDLKRIVSLFGHSS
>Mature_260_residues
MDGVFKMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIVGERRFRAAKLIQLTNIPVIEVD
IKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQKDLSEKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGH
AKVILSLKDRQDRYNLYLIILKKKFSVRDAEKYVKNFSKSIVKKRELEQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIE
IEYFTAGDLKRIVSLFGHSS

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PARB_BORBU (O51395)

Other databases:

- EMBL:   AE000783
- PIR:   A70154
- RefSeq:   NP_212568.1
- ProteinModelPortal:   O51395
- EnsemblBacteria:   EBBORT00000009044
- GeneID:   1195279
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0434
- NMPDR:   fig|224326.1.peg.818
- TIGR:   BB_0434
- GeneTree:   EBGT00050000007351
- HOGENOM:   HBG641230
- OMA:   SASIKEH
- ProtClustDB:   CLSK507589
- BioCyc:   BBUR224326:BB_0434-MONOMER
- InterPro:   IPR001387
- InterPro:   IPR004437
- InterPro:   IPR003115
- SMART:   SM00470
- TIGRFAMs:   TIGR00180

Pfam domain/function: PF01381 HTH_3; PF02195 ParBc; SSF110849 ParBc

EC number: NA

Molecular weight: Translated: 30341; Mature: 30341

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVFKMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIVGE
CCCCEEEEEEEEEECCCCCCCCCEEEEEHHHHEEEECCCCCCCEEEEEECCCCEEEEECC
RRFRAAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQ
CHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCH
KDLSEKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLII
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEE
LKKKFSVRDAEKYVKNFSKSIVKKRELEQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIE
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEE
IEYFTAGDLKRIVSLFGHSS
EEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure
MDGVFKMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIVGE
CCCCEEEEEEEEEECCCCCCCCCEEEEEHHHHEEEECCCCCCCEEEEEECCCCEEEEECC
RRFRAAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENFTPVEEAYAYKNIMNKYSLTQ
CHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCH
KDLSEKIGKSRTYISNLVRILDLEQEILNAIHRKEISFGHAKVILSLKDRQDRYNLYLII
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEE
LKKKFSVRDAEKYVKNFSKSIVKKRELEQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIE
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEE
IEYFTAGDLKRIVSLFGHSS
EEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685