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The map label for this gene is rsmI [H]

Identifier: 15594772

GI number: 15594772

Start: 446969

End: 447760

Strand: Reverse

Name: rsmI [H]

Synonym: BB0427

Alternate gene names: 15594772

Gene position: 447760-446969 (Counterclockwise)

Preceding gene: 15594774

Following gene: 15594771

Centisome position: 49.17

GC content: 31.44

Gene sequence:

>792_bases
ATGGCTTATGTCTTATTCTTGTATTTGGTAAGTAAAAGGTTTTGGATTTTTATCATTAAGAAAAATGTTTTTAATATATT
TTATTTATTTTTAGTTTTGGAGGAATTAAAAGGGCCTGTGTTATATATTGTTGGTACGCCAATAGGCAATTTAGAAGATA
TTACTTATAGAGCAATTGATGTTTTAAAATCGGTAAATGTTATCTTTGCGGAAGATACGAGAGTAACTAGCAAACTTTTG
TCTCGATATAAAATTAATAAAAAAATGATTTCTTGTAATGCCGTAACAGAAAACAAGAAGATAAGCTTGCTATTGGATTA
TTTGGCAAAAGGAAATTCTGTTGCTTTTGTTAGCGATGCTGGTACTCCGGGGCTTAGTGATCCGGGTAGCTTATTAGTTG
CTGCTGCTTTTAGAGAGGGATACAAAGTTTGTCCAATTCCTGGAGTAAGTTCTTTTAATACAATTGTAAGTGTTAATCCT
TTTAGAGATAAATCAGTGTTTTTTGAGGGATTTTTGCCTAACAAAGGCCTTAAAAGATTTAAAAGAATTGCTGAGCTATA
TAAAAGGGGAGATGCTTTTGTTCTGCTTGAATCTGGTCATAGAATTTTGAAATTGCTTGTTGAAATTTCTTCTGTTAGTT
TAGATGCGAAGGTTCTTATTGGTCGCGAGATGACAAAAATTTATGAAGAATATCAAATTGGCAAACCTTTAGAATTAAAA
AAATATTTTGAATCGAGTAAGGATAAGGTTAAAGGAGAGTTTACTATTCTAGTCAGCAGAAGTCGTTCATAA

Upstream 100 bases:

>100_bases
AAACATAAATTTTCCCTTTCTTTTAACTTTTTAATCATTAATACTTAATGATATAACTAAATGTAATACAAAAGCAAGTA
TTTTGATAGACATATAAAAT

Downstream 100 bases:

>100_bases
TAAATGTTTTCTACTTGGATTTTAAAATTTATTTATTCTTGATTTTGCTCGATTGATTTATTGTGTTATACTTGAATTTT
GATAGGGGTTTTTATGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAYVLFLYLVSKRFWIFIIKKNVFNIFYLFLVLEELKGPVLYIVGTPIGNLEDITYRAIDVLKSVNVIFAEDTRVTSKLL
SRYKINKKMISCNAVTENKKISLLLDYLAKGNSVAFVSDAGTPGLSDPGSLLVAAAFREGYKVCPIPGVSSFNTIVSVNP
FRDKSVFFEGFLPNKGLKRFKRIAELYKRGDAFVLLESGHRILKLLVEISSVSLDAKVLIGREMTKIYEEYQIGKPLELK
KYFESSKDKVKGEFTILVSRSRS

Sequences:

>Translated_263_residues
MAYVLFLYLVSKRFWIFIIKKNVFNIFYLFLVLEELKGPVLYIVGTPIGNLEDITYRAIDVLKSVNVIFAEDTRVTSKLL
SRYKINKKMISCNAVTENKKISLLLDYLAKGNSVAFVSDAGTPGLSDPGSLLVAAAFREGYKVCPIPGVSSFNTIVSVNP
FRDKSVFFEGFLPNKGLKRFKRIAELYKRGDAFVLLESGHRILKLLVEISSVSLDAKVLIGREMTKIYEEYQIGKPLELK
KYFESSKDKVKGEFTILVSRSRS
>Mature_262_residues
AYVLFLYLVSKRFWIFIIKKNVFNIFYLFLVLEELKGPVLYIVGTPIGNLEDITYRAIDVLKSVNVIFAEDTRVTSKLLS
RYKINKKMISCNAVTENKKISLLLDYLAKGNSVAFVSDAGTPGLSDPGSLLVAAAFREGYKVCPIPGVSSFNTIVSVNPF
RDKSVFFEGFLPNKGLKRFKRIAELYKRGDAFVLLESGHRILKLLVEISSVSLDAKVLIGREMTKIYEEYQIGKPLELKK
YFESSKDKVKGEFTILVSRSRS

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=225, Percent_Identity=37.3333333333333, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29739; Mature: 29608

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYVLFLYLVSKRFWIFIIKKNVFNIFYLFLVLEELKGPVLYIVGTPIGNLEDITYRAID
CHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
VLKSVNVIFAEDTRVTSKLLSRYKINKKMISCNAVTENKKISLLLDYLAKGNSVAFVSDA
HHHHCCEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCEEEEECC
GTPGLSDPGSLLVAAAFREGYKVCPIPGVSSFNTIVSVNPFRDKSVFFEGFLPNKGLKRF
CCCCCCCCHHHEEHHHHHCCCEECCCCCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHH
KRIAELYKRGDAFVLLESGHRILKLLVEISSVSLDAKVLIGREMTKIYEEYQIGKPLELK
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCHHH
KYFESSKDKVKGEFTILVSRSRS
HHHCCCCHHCCCEEEEEEECCCC
>Mature Secondary Structure 
AYVLFLYLVSKRFWIFIIKKNVFNIFYLFLVLEELKGPVLYIVGTPIGNLEDITYRAID
HHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
VLKSVNVIFAEDTRVTSKLLSRYKINKKMISCNAVTENKKISLLLDYLAKGNSVAFVSDA
HHHHCCEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCEEEEECC
GTPGLSDPGSLLVAAAFREGYKVCPIPGVSSFNTIVSVNPFRDKSVFFEGFLPNKGLKRF
CCCCCCCCHHHEEHHHHHCCCEECCCCCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHH
KRIAELYKRGDAFVLLESGHRILKLLVEISSVSLDAKVLIGREMTKIYEEYQIGKPLELK
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCHHH
KYFESSKDKVKGEFTILVSRSRS
HHHCCCCHHCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA