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The map label for this gene is smf

Identifier: 15594642

GI number: 15594642

Start: 305671

End: 306618

Strand: Reverse

Name: smf

Synonym: BB0297

Alternate gene names: 15594642

Gene position: 306618-305671 (Counterclockwise)

Preceding gene: 15594643

Following gene: 15594641

Centisome position: 33.67

GC content: 29.64

Gene sequence:

>948_bases
ATGATGAAATTGCTTTATATTGATAATTTGAAATTTTTAAAAGGCAAAGAAAAATTAAAACTTTTTAATAATTTTGATTT
TAATAATGTTATTAAATTGACCCAGAAAGACATTGAGTCTTATTTTTTAAAATCATTTAGAAGATTGTTTAAGTTGCCCG
ATCTAAAATTAGTAGAATTACAAGAAAAAGTTATTCAAAGGACCAAAGCCAAAGTTGCTATTCTAGGGTCTAAGTCTTAT
CCTAATAAGCTTAAAAGAATTTATGACCCTCCTTTTGCTATTTACTACAAGGGCAATTTACCAGATTGTTCTTTATTATC
TTGGGCTGTTGTTGGTTCTAGAAAAATTAGTAAAACTCTTGCTGAGAGAACAAGGGAATTTTCTTCACATCTTGCAAAGA
ATGGTGTAGAGATTATTTCTGGATTTGCAATTGGGGCAGATATTGAGGCTCATATAGCAGCAATAAATGAGAATAAGAGA
ACATTTGCTGTTATTCCAACAGATATTGACAATATTTATCCTAGGCAAAATCGAAAATATGTTTCCAAGCTTTTAGAACA
AGGTGGAGGAATAATTACTGAGACTTTGCCATTTGATAAAATTCAAAATTATTTTTTTGCCAAAAGAAATAGATTGGTAT
CAGGTCTGTCTGATGCTATTTTTATAACATATGCACCCTTGAAATCAGGAGCTTTAATTACAGCTGAGCTTGGTCTTGAC
TTAGGACTTGATGTTTATGTTTATGATTTAGATTTTTGTGGTGATGGAGCTGTAAAATTGCATGATTTTGGTGCGCAAGA
AATAAAAACCGTTAAGGATCTTTATGCTTTATTAAATATTAAATATGTAGATTCCAATAATATTGAAGATGATTCTAAAG
AGTGTTGTAATTGTAAAAATGTATCTGATGTTCTTATTGGGGAACTTTTAAAAGAGGTATGTAAATAG

Upstream 100 bases:

>100_bases
TAATGCTATATTGTTTTATGATAAAGCTAGTAAAAAGGCTTCAACTGAAGAGCAAAAAGAAGGTGTTTCTAGGATCATGA
GTAATTTGAAGTAATTATTT

Downstream 100 bases:

>100_bases
GGGGGTAATATGAGCTTTAAAGGAACCACAGTTATTGCAATAAAAAAAAATGGTAAGACTGTGGTGGCAGCAGATGGACA
AGTAACTTTTGGACATACTG

Product: smg protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MMKLLYIDNLKFLKGKEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLFKLPDLKLVELQEKVIQRTKAKVAILGSKSY
PNKLKRIYDPPFAIYYKGNLPDCSLLSWAVVGSRKISKTLAERTREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKR
TFAVIPTDIDNIYPRQNRKYVSKLLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAELGLD
LGLDVYVYDLDFCGDGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDSKECCNCKNVSDVLIGELLKEVCK

Sequences:

>Translated_315_residues
MMKLLYIDNLKFLKGKEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLFKLPDLKLVELQEKVIQRTKAKVAILGSKSY
PNKLKRIYDPPFAIYYKGNLPDCSLLSWAVVGSRKISKTLAERTREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKR
TFAVIPTDIDNIYPRQNRKYVSKLLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAELGLD
LGLDVYVYDLDFCGDGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDSKECCNCKNVSDVLIGELLKEVCK
>Mature_315_residues
MMKLLYIDNLKFLKGKEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLFKLPDLKLVELQEKVIQRTKAKVAILGSKSY
PNKLKRIYDPPFAIYYKGNLPDCSLLSWAVVGSRKISKTLAERTREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKR
TFAVIPTDIDNIYPRQNRKYVSKLLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAELGLD
LGLDVYVYDLDFCGDGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDSKECCNCKNVSDVLIGELLKEVCK

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family

Homologues:

Organism=Escherichia coli, GI48994932, Length=186, Percent_Identity=36.5591397849462, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMF_BORBU (Q44773)

Other databases:

- EMBL:   U43739
- EMBL:   L40505
- EMBL:   X96685
- EMBL:   L76303
- EMBL:   AE000783
- PIR:   A70137
- RefSeq:   NP_212431.1
- ProteinModelPortal:   Q44773
- EnsemblBacteria:   EBBORT00000008904
- GeneID:   1195134
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0297
- NMPDR:   fig|224326.1.peg.681
- TIGR:   BB_0297
- GeneTree:   EBGT00050000007396
- HOGENOM:   HBG354409
- OMA:   FRFPERN
- ProtClustDB:   CLSK507496
- BioCyc:   BBUR224326:BB_0297-MONOMER
- InterPro:   IPR003488
- TIGRFAMs:   TIGR00732

Pfam domain/function: PF02481 DNA_processg_A

EC number: NA

Molecular weight: Translated: 35691; Mature: 35691

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLLYIDNLKFLKGKEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLFKLPDLKLVEL
CEEEEEECCCHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QEKVIQRTKAKVAILGSKSYPNKLKRIYDPPFAIYYKGNLPDCSLLSWAVVGSRKISKTL
HHHHHHHHHCEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHH
AERTREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKRTFAVIPTDIDNIYPRQNRKY
HHHHHHHHHHHHHCCHHHHHCEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHH
VSKLLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAELGLD
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCC
LGLDVYVYDLDFCGDGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDSKECCNCKN
CCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHCCCCC
VSDVLIGELLKEVCK
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKLLYIDNLKFLKGKEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLFKLPDLKLVEL
CEEEEEECCCHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QEKVIQRTKAKVAILGSKSYPNKLKRIYDPPFAIYYKGNLPDCSLLSWAVVGSRKISKTL
HHHHHHHHHCEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHH
AERTREFSSHLAKNGVEIISGFAIGADIEAHIAAINENKRTFAVIPTDIDNIYPRQNRKY
HHHHHHHHHHHHHCCHHHHHCEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHH
VSKLLEQGGGIITETLPFDKIQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAELGLD
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCC
LGLDVYVYDLDFCGDGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDSKECCNCKN
CCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHCCCCC
VSDVLIGELLKEVCK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685