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The map label for this gene is ssb

Identifier: 15594460

GI number: 15594460

Start: 111889

End: 112338

Strand: Reverse

Name: ssb

Synonym: BB0114

Alternate gene names: 15594460

Gene position: 112338-111889 (Counterclockwise)

Preceding gene: 15594461

Following gene: 15594459

Centisome position: 12.34

GC content: 30.22

Gene sequence:

>450_bases
ATGGCTGATATTAATTCATTAGTATTGTCTGGTAGGCTTACAAGAGATTCTGAGCTTTCTTATACAGAAAGTGGCATGGC
TGTTCTTAGATTTTCTATAGCTAATAATAGAAGAATGAAGAAGAATGATGAATGGATTGATTATCCACAATATTTTGATT
GTGTTATTTTTTCAAAAAGAGCCGAAAGTCTCAACGATTATTTGAAAAAGGGCAAACAAGTTGTGGTAAGTGGATCTCTT
AAATATGAAAGCTGGCAAGATAGGAATACGGGTGATAAGAGGAGTAAGGTAAATATATTTGTAGATAATTTGCAAATGTT
TAGTTCAGGTTCTAATACTATTCAAATGCAAGATTCAGATGTTAATAGTTTGACAAATCATAAAAAAGAAGATGTAGTTA
AGGATATTGATATTGTTGATGATAAATTTAGCGAAGATATACCTTTTTAA

Upstream 100 bases:

>100_bases
GAGACAATATTGACAAAGACAGTCTTAAAGGTGCCTCTAAAGTTGAAACACCAACAGGTCCTGAAAGCACAGATATTCAG
GAAAAATAAGAGGGTTTTTA

Downstream 100 bases:

>100_bases
TGGAGTTTAAGTTATGTATAAAGATAGGGATACAAATCAAAGAGATTCAAGATTTGAAAATCAGCAGGATGGCTTTAAAA
AAAATTCAAATTTCAGATTT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MADINSLVLSGRLTRDSELSYTESGMAVLRFSIANNRRMKKNDEWIDYPQYFDCVIFSKRAESLNDYLKKGKQVVVSGSL
KYESWQDRNTGDKRSKVNIFVDNLQMFSSGSNTIQMQDSDVNSLTNHKKEDVVKDIDIVDDKFSEDIPF

Sequences:

>Translated_149_residues
MADINSLVLSGRLTRDSELSYTESGMAVLRFSIANNRRMKKNDEWIDYPQYFDCVIFSKRAESLNDYLKKGKQVVVSGSL
KYESWQDRNTGDKRSKVNIFVDNLQMFSSGSNTIQMQDSDVNSLTNHKKEDVVKDIDIVDDKFSEDIPF
>Mature_148_residues
ADINSLVLSGRLTRDSELSYTESGMAVLRFSIANNRRMKKNDEWIDYPQYFDCVIFSKRAESLNDYLKKGKQVVVSGSLK
YESWQDRNTGDKRSKVNIFVDNLQMFSSGSNTIQMQDSDVNSLTNHKKEDVVKDIDIVDDKFSEDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSB_BORBU (O51141)

Other databases:

- EMBL:   AE000783
- PIR:   B70114
- RefSeq:   NP_212248.1
- ProteinModelPortal:   O51141
- SMR:   O51141
- EnsemblBacteria:   EBBORT00000008752
- GeneID:   1194950
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0114
- NMPDR:   fig|224326.1.peg.498
- TIGR:   BB_0114
- GeneTree:   EBGT00050000006926
- HOGENOM:   HBG755544
- OMA:   LEIWGKT
- ProtClustDB:   CLSK507364
- BioCyc:   BBUR224326:BB_0114-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 17166; Mature: 17035

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADINSLVLSGRLTRDSELSYTESGMAVLRFSIANNRRMKKNDEWIDYPQYFDCVIFSKR
CCCCHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
AESLNDYLKKGKQVVVSGSLKYESWQDRNTGDKRSKVNIFVDNLQMFSSGSNTIQMQDSD
HHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCCCEEEEEEECEEEECCCCCEEEEECCC
VNSLTNHKKEDVVKDIDIVDDKFSEDIPF
CHHHHCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ADINSLVLSGRLTRDSELSYTESGMAVLRFSIANNRRMKKNDEWIDYPQYFDCVIFSKR
CCCHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
AESLNDYLKKGKQVVVSGSLKYESWQDRNTGDKRSKVNIFVDNLQMFSSGSNTIQMQDSD
HHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCCCEEEEEEECEEEECCCCCEEEEECCC
VNSLTNHKKEDVVKDIDIVDDKFSEDIPF
CHHHHCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685