| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is 15594389
Identifier: 15594389
GI number: 15594389
Start: 41443
End: 42483
Strand: Reverse
Name: 15594389
Synonym: BB0043
Alternate gene names: NA
Gene position: 42483-41443 (Counterclockwise)
Preceding gene: 15594390
Following gene: 15594388
Centisome position: 4.66
GC content: 27.76
Gene sequence:
>1041_bases ATGATTAGAAAATATTTGATTTATATAAGTTTGCTATTTATTGTTTTTGAAGTTTACTCTAAGCCAGCTTTTATAAGTCA AGACGATTCGTATGAGCTTGATTTTAGTAGTGGAGAGGTAGATATTAGTGTAAATACCAATTCAAAATTTAATCTTTCTT TTAAAGATGAGTCTTGGATTTATATCAAAAGCATTGAAAATGAAGCTTTTATTAAGTTAATTGGAGAATCTTATGATAAC GGTGCTGTTTTTACTTTTCAGACTTTTAAAAAAGAAGGCAAAATTAAATTGGTTTTCACTTATCAAAATGTTAAAGATTC AAGTGAATTTAATAAAATAATTATCTTGAAAATTACAAAGAATTTTGAAGTTGCAATTCCACAAGGCGTTGGTGGTGGCT CTAGCAGGGACAATAACATTGAAACTGGTAATAATCTTGAACTTGGGGGGGGGAGTATTAGCGGGGCAACTTCTAAAGAG ATTATTGTTAGGGCTTTAAATTTGTCCTACATAAATGATTACAAAGGAGCAATAGATTTGCTTAATAAGTATAATTTCAA TGACGATAAATATATTTTATTGAAGGCGGAAATTCATTATAAAAATGGTGATTATTTAAAATCTTATGAAAATTATTTGA AATTGAAGAGTAAATATTTTCAAAGCATTGTTTTTGATCTAATTAGGCTTGCTATAGAATTAAATATTAAAGAAGAGGTT TTAGAGAACGCTAGATATTTAGTTGAAAAGAATGTTGATTTTTCTGAGAGCATTTATCTTGAGATCTTTGAATTCTTAGT AACAAGGGGAGAGCATGAGTTTGCTTTAAATTTTAGCTCTCTTTACTTTCCTAAGTATATTAATTCAAGCTTTTCAGACA AATATAGTTATTTGTTGGGAAAACTTTATGAGTCTGAGAGCAAGCATAAAGATTTTTTAAAGGCTTTGCATTACTATAAA TTGGTTATTGATAATTACCCTTTTAGTTATTATTATGAGAGAGCCAAGATAAGATATTTATTTTTAAAGCGGTTTTTTTA G
Upstream 100 bases:
>100_bases ATTTTTTCAAGGATCTTTGGATTAAAAAGGAAAATTTATTTAACGTTGATATTGAGAAGGAGAATGAAAAATTAATAGAT AAGATTTTAGAAATTTCCAA
Downstream 100 bases:
>100_bases GAGACATGATATGATAAGGAGAAAGCTTACTAAACAACTTGAAATAATAAAAGATTATCTTTGGGATATGAAAGAATGTG TGCTTAAGATTATCGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MIRKYLIYISLLFIVFEVYSKPAFISQDDSYELDFSSGEVDISVNTNSKFNLSFKDESWIYIKSIENEAFIKLIGESYDN GAVFTFQTFKKEGKIKLVFTYQNVKDSSEFNKIIILKITKNFEVAIPQGVGGGSSRDNNIETGNNLELGGGSISGATSKE IIVRALNLSYINDYKGAIDLLNKYNFNDDKYILLKAEIHYKNGDYLKSYENYLKLKSKYFQSIVFDLIRLAIELNIKEEV LENARYLVEKNVDFSESIYLEIFEFLVTRGEHEFALNFSSLYFPKYINSSFSDKYSYLLGKLYESESKHKDFLKALHYYK LVIDNYPFSYYYERAKIRYLFLKRFF
Sequences:
>Translated_346_residues MIRKYLIYISLLFIVFEVYSKPAFISQDDSYELDFSSGEVDISVNTNSKFNLSFKDESWIYIKSIENEAFIKLIGESYDN GAVFTFQTFKKEGKIKLVFTYQNVKDSSEFNKIIILKITKNFEVAIPQGVGGGSSRDNNIETGNNLELGGGSISGATSKE IIVRALNLSYINDYKGAIDLLNKYNFNDDKYILLKAEIHYKNGDYLKSYENYLKLKSKYFQSIVFDLIRLAIELNIKEEV LENARYLVEKNVDFSESIYLEIFEFLVTRGEHEFALNFSSLYFPKYINSSFSDKYSYLLGKLYESESKHKDFLKALHYYK LVIDNYPFSYYYERAKIRYLFLKRFF >Mature_346_residues MIRKYLIYISLLFIVFEVYSKPAFISQDDSYELDFSSGEVDISVNTNSKFNLSFKDESWIYIKSIENEAFIKLIGESYDN GAVFTFQTFKKEGKIKLVFTYQNVKDSSEFNKIIILKITKNFEVAIPQGVGGGSSRDNNIETGNNLELGGGSISGATSKE IIVRALNLSYINDYKGAIDLLNKYNFNDDKYILLKAEIHYKNGDYLKSYENYLKLKSKYFQSIVFDLIRLAIELNIKEEV LENARYLVEKNVDFSESIYLEIFEFLVTRGEHEFALNFSSLYFPKYINSSFSDKYSYLLGKLYESESKHKDFLKALHYYK LVIDNYPFSYYYERAKIRYLFLKRFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y043_BORBU (O51072)
Other databases:
- EMBL: AE000783 - PIR: C70105 - RefSeq: NP_212177.1 - EnsemblBacteria: EBBORT00000008413 - GeneID: 1194879 - GenomeReviews: AE000783_GR - KEGG: bbu:BB0043 - NMPDR: fig|224326.1.peg.427 - TIGR: BB_0043 - GeneTree: EBGT00050000007532 - HOGENOM: HBG354436 - OMA: NDYKGAI - ProtClustDB: CLSK507313 - BioCyc: BBUR224326:BB_0043-MONOMER - GO: GO:0005488 - InterPro: IPR011990 - Gene3D: G3DSA:1.25.40.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40532; Mature: 40532
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKYLIYISLLFIVFEVYSKPAFISQDDSYELDFSSGEVDISVNTNSKFNLSFKDESWI CCHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCEEEEEEECCCEEEEEECCCCEE YIKSIENEAFIKLIGESYDNGAVFTFQTFKKEGKIKLVFTYQNVKDSSEFNKIIILKITK EEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEEC NFEVAIPQGVGGGSSRDNNIETGNNLELGGGSISGATSKEIIVRALNLSYINDYKGAIDL CEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHEEEEECHHHHHHHHHHHHH LNKYNFNDDKYILLKAEIHYKNGDYLKSYENYLKLKSKYFQSIVFDLIRLAIELNIKEEV HHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LENARYLVEKNVDFSESIYLEIFEFLVTRGEHEFALNFSSLYFPKYINSSFSDKYSYLLG HHHHHEEHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHEECHHHHCCCCCHHHHHHHH KLYESESKHKDFLKALHYYKLVIDNYPFSYYYERAKIRYLFLKRFF HHHHCCHHHHHHHHHHHHHHHEECCCCCHHEEHHHHHEEEEEECCC >Mature Secondary Structure MIRKYLIYISLLFIVFEVYSKPAFISQDDSYELDFSSGEVDISVNTNSKFNLSFKDESWI CCHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCEEEEEEECCCEEEEEECCCCEE YIKSIENEAFIKLIGESYDNGAVFTFQTFKKEGKIKLVFTYQNVKDSSEFNKIIILKITK EEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEEC NFEVAIPQGVGGGSSRDNNIETGNNLELGGGSISGATSKEIIVRALNLSYINDYKGAIDL CEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHEEEEECHHHHHHHHHHHHH LNKYNFNDDKYILLKAEIHYKNGDYLKSYENYLKLKSKYFQSIVFDLIRLAIELNIKEEV HHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LENARYLVEKNVDFSESIYLEIFEFLVTRGEHEFALNFSSLYFPKYINSSFSDKYSYLLG HHHHHEEHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHEECHHHHCCCCCHHHHHHHH KLYESESKHKDFLKALHYYKLVIDNYPFSYYYERAKIRYLFLKRFF HHHHCCHHHHHHHHHHHHHHHEECCCCCHHEEHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685