| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is 15594378
Identifier: 15594378
GI number: 15594378
Start: 29543
End: 31015
Strand: Direct
Name: 15594378
Synonym: BB0032
Alternate gene names: NA
Gene position: 29543-31015 (Clockwise)
Preceding gene: 15594374
Following gene: 15594379
Centisome position: 3.24
GC content: 25.39
Gene sequence:
>1473_bases ATGAAAGAGGTTGACGAGAATTCAAATGTTGAGCTTTTTGAAGTTAAATTAAAGCCAATCCTAGGAATAGAGCCTAAGGT TTACGTATTTCTTACAACAATAATATTGCTTTTAAGTTTAATATCAACTTTAATAATCATACCTAAATTTAAAAATCCAG GAGCATATTTAAAAATAAATTCCAATATTGAAAACACTTACATATATTTAAACGAAAAATATATCGGTAGAACCCCACTT AACAAATATATAAATGCCACCGAAGGAGTTCTTAGAGCAAAGAGAATGGGATTTAAAACTTACGAACAAAGGATAAAAAT TCACAACAAATTTTTTGGAAACTACAGTTTGCAAATAAATTTAGAACTGGTTGATCCTGAAAAGATCATTAAACAAAGAC AAAAAGAGCTCTCTATAATGGTGAAAATAAAAAATATTAATGAAAATACAAAACTAATTCCTGTTTTTTCATTAATATCT AGCGAACTTAAAGAACATCCCAAATACATTAAAAAATTTCTAAAAGATTCTATACCTTACTTAAATTCAACCGAAATGTT TAAAGATTTTCTAAATTCATATAAAGCTATATATTCAATAGACCAAGACAACAGCAATCAAGAAGAAATATGGAACTCTT TAAAAACAAATTTTGATTTAGAAAATAGAGCCATCTTTTGGTTTTTAGAAAATTTAGATAAAGATTTAAAAATACTAACA AAAAATGCGCCTTGGGTTAAAACATTAGCCAAAACTCTAGACAATGAAAATATTCAATTAATTTCTAAAAATGAAAAAAT CAATATAAAATTACCTGGATTTAAAAAAATAAATTCAAATAAAATCGAAAAAATTCAAAATTATGAATTAAATTCATTAG ATTCAAAAAACATTTCACTAAAATCTACCTATAACGTAAAAGAATTTCTTATTCAAGAACAAAATGTTACAAAATACGAG TATCAAGATTTTTTAAAAGAAAATCCAAAATGGGCATTAAATAATAAAGAAAATTTAATTAAAGAACAACTTGTAGATGA AAATTATCTTAAAAATTTTAATCAAATAGGCTTAAATGAAGCCATCACTGGAATATCTTATTTCTCAGCAATAGAATACG CCAACTGGTACTCTAAAAAACTTCCCACAGGGTTCAAAGCAAGACTGCCTATATCACAAGAATGGGAATTGTACCAAAAA GAACCAAACAAAAACCCATTAAATATTAATGAAATATCAAAAAAAGTTGGATTTTGGAATTTAATGCAAAATTCATCTTT TAATGAAATCGCAATATTTAAAAATGAAAAAAATTTTTATAGCGAAAATTCAAATTTTTACTCATTGATAACAGAAATTA GAACATATTCCCAGCAAAATAATAATTTACTCAATGCATCAACCAAAGCCTCTTTTTTGAAAAACTGGAGTTCTCCAAAC ATTGGCTTTAGGTTGATTGTATCAAAGGAATAA
Upstream 100 bases:
>100_bases TGCAAATTTATCCAATCTTCTTAAATACATAACCTAACCTCAAGAATTAAATAATACAAAATATTGACACTTATTTAAAT ACTTTTCTATACTTTAAAAG
Downstream 100 bases:
>100_bases AAGGAATAGATTTGAACACAAACAATTTGCTTCTTGAAAACAAAAAAGCAAAATTTAATTACTTTATTGAAGAGAAAATA AGTTGTGGAATAGTGCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MKEVDENSNVELFEVKLKPILGIEPKVYVFLTTIILLLSLISTLIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL NKYINATEGVLRAKRMGFKTYEQRIKIHNKFFGNYSLQINLELVDPEKIIKQRQKELSIMVKIKNINENTKLIPVFSLIS SELKEHPKYIKKFLKDSIPYLNSTEMFKDFLNSYKAIYSIDQDNSNQEEIWNSLKTNFDLENRAIFWFLENLDKDLKILT KNAPWVKTLAKTLDNENIQLISKNEKINIKLPGFKKINSNKIEKIQNYELNSLDSKNISLKSTYNVKEFLIQEQNVTKYE YQDFLKENPKWALNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAIEYANWYSKKLPTGFKARLPISQEWELYQK EPNKNPLNINEISKKVGFWNLMQNSSFNEIAIFKNEKNFYSENSNFYSLITEIRTYSQQNNNLLNASTKASFLKNWSSPN IGFRLIVSKE
Sequences:
>Translated_490_residues MKEVDENSNVELFEVKLKPILGIEPKVYVFLTTIILLLSLISTLIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL NKYINATEGVLRAKRMGFKTYEQRIKIHNKFFGNYSLQINLELVDPEKIIKQRQKELSIMVKIKNINENTKLIPVFSLIS SELKEHPKYIKKFLKDSIPYLNSTEMFKDFLNSYKAIYSIDQDNSNQEEIWNSLKTNFDLENRAIFWFLENLDKDLKILT KNAPWVKTLAKTLDNENIQLISKNEKINIKLPGFKKINSNKIEKIQNYELNSLDSKNISLKSTYNVKEFLIQEQNVTKYE YQDFLKENPKWALNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAIEYANWYSKKLPTGFKARLPISQEWELYQK EPNKNPLNINEISKKVGFWNLMQNSSFNEIAIFKNEKNFYSENSNFYSLITEIRTYSQQNNNLLNASTKASFLKNWSSPN IGFRLIVSKE >Mature_490_residues MKEVDENSNVELFEVKLKPILGIEPKVYVFLTTIILLLSLISTLIIIPKFKNPGAYLKINSNIENTYIYLNEKYIGRTPL NKYINATEGVLRAKRMGFKTYEQRIKIHNKFFGNYSLQINLELVDPEKIIKQRQKELSIMVKIKNINENTKLIPVFSLIS SELKEHPKYIKKFLKDSIPYLNSTEMFKDFLNSYKAIYSIDQDNSNQEEIWNSLKTNFDLENRAIFWFLENLDKDLKILT KNAPWVKTLAKTLDNENIQLISKNEKINIKLPGFKKINSNKIEKIQNYELNSLDSKNISLKSTYNVKEFLIQEQNVTKYE YQDFLKENPKWALNNKENLIKEQLVDENYLKNFNQIGLNEAITGISYFSAIEYANWYSKKLPTGFKARLPISQEWELYQK EPNKNPLNINEISKKVGFWNLMQNSSFNEIAIFKNEKNFYSENSNFYSLITEIRTYSQQNNNLLNASTKASFLKNWSSPN IGFRLIVSKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y032_BORBU (O51063)
Other databases:
- EMBL: AE000783 - PIR: H70103 - RefSeq: NP_212166.1 - EnsemblBacteria: EBBORT00000008562 - GeneID: 1194868 - GenomeReviews: AE000783_GR - KEGG: bbu:BB0032 - NMPDR: fig|224326.1.peg.416 - TIGR: BB_0032 - GeneTree: EBGT00050000006995 - HOGENOM: HBG354421 - OMA: PISQEWE - ProtClustDB: CLSK507307 - BioCyc: BBUR224326:BB_0032-MONOMER - GO: GO:0005488 - InterPro: IPR016187 - InterPro: IPR013229 - InterPro: IPR005532 - Gene3D: G3DSA:3.90.1580.10
Pfam domain/function: PF03781 DUF323; PF08308 PEGA; SSF56436 C-type_lectin_fold
EC number: NA
Molecular weight: Translated: 57591; Mature: 57591
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb8e7954)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVDENSNVELFEVKLKPILGIEPKVYVFLTTIILLLSLISTLIIIPKFKNPGAYLKIN CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEC SNIENTYIYLNEKYIGRTPLNKYINATEGVLRAKRMGFKTYEQRIKIHNKFFGNYSLQIN CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEE LELVDPEKIIKQRQKELSIMVKIKNINENTKLIPVFSLISSELKEHPKYIKKFLKDSIPY EEEECHHHHHHHHHHCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC LNSTEMFKDFLNSYKAIYSIDQDNSNQEEIWNSLKTNFDLENRAIFWFLENLDKDLKILT CCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHCCCCEEEEE KNAPWVKTLAKTLDNENIQLISKNEKINIKLPGFKKINSNKIEKIQNYELNSLDSKNISL CCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCEEE KSTYNVKEFLIQEQNVTKYEYQDFLKENPKWALNNKENLIKEQLVDENYLKNFNQIGLNE EECCCHHHHHHCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHCCHHHHHHHHHCCHHH AITGISYFSAIEYANWYSKKLPTGFKARLPISQEWELYQKEPNKNPLNINEISKKVGFWN HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHCHHH LMQNSSFNEIAIFKNEKNFYSENSNFYSLITEIRTYSQQNNNLLNASTKASFLKNWSSPN HHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCC IGFRLIVSKE CCEEEEEECH >Mature Secondary Structure MKEVDENSNVELFEVKLKPILGIEPKVYVFLTTIILLLSLISTLIIIPKFKNPGAYLKIN CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEC SNIENTYIYLNEKYIGRTPLNKYINATEGVLRAKRMGFKTYEQRIKIHNKFFGNYSLQIN CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEE LELVDPEKIIKQRQKELSIMVKIKNINENTKLIPVFSLISSELKEHPKYIKKFLKDSIPY EEEECHHHHHHHHHHCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC LNSTEMFKDFLNSYKAIYSIDQDNSNQEEIWNSLKTNFDLENRAIFWFLENLDKDLKILT CCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHCCCCEEEEE KNAPWVKTLAKTLDNENIQLISKNEKINIKLPGFKKINSNKIEKIQNYELNSLDSKNISL CCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCEEE KSTYNVKEFLIQEQNVTKYEYQDFLKENPKWALNNKENLIKEQLVDENYLKNFNQIGLNE EECCCHHHHHHCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHCCHHHHHHHHHCCHHH AITGISYFSAIEYANWYSKKLPTGFKARLPISQEWELYQKEPNKNPLNINEISKKVGFWN HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHCHHH LMQNSSFNEIAIFKNEKNFYSENSNFYSLITEIRTYSQQNNNLLNASTKASFLKNWSSPN HHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCC IGFRLIVSKE CCEEEEEECH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685