| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is 15594349
Identifier: 15594349
GI number: 15594349
Start: 1784
End: 3148
Strand: Reverse
Name: 15594349
Synonym: BB0003
Alternate gene names: NA
Gene position: 3148-1784 (Counterclockwise)
Preceding gene: 15594351
Following gene: 15594348
Centisome position: 0.35
GC content: 28.5
Gene sequence:
>1365_bases TTGCGATACCATGAAAATATTTTTAATATTTCGGATGAAATTTTGAGGTTTAAGTTCAACAAAGGCTTGGTTGAAGATAA TTTAAAAAAATATTTTCATGATTTTTCTAAATTTTTGCAATCAGAAGAAGGTGATTGTTATATTTTTTCTTCTTGTGATC TTGAAAATTTGGGTCTAATGCTTTTCCCATACCTTTCTTTTGGAATCTTAAATGGTGGCTCTGCAACAAGTTATTTTGAT TTAGCTAAAAATAGGGCGTTAAATGAAGATTTATATATGTTATATGAATCTAAAATACTTGAATTTAAAGAAAAATTTGG AGAATTTCCAAAGGGGATAACACCAGCTTATATTAACAAAGATGGTAGTTTTGGATTTTCATTTTTGGCTTTGAAAATTA GGCATCTTTTAATGGTTGCTAAAAGATATGAATCTTTTTGTGGCAAAATGATCAAGCCCTCAATATTTCAAATGACTAGT TGCAAAACGGATGAATTTATTTCAAAATCTTTGGACGATTTATTTGCAGATGACTTGATTAAAAGTGTAAATTTTTGCAA TCTCAAAAAAGAAGATGTTTTCACAGCTGTTCAACCTTTAGTTTATTGTTATGAAAAACTGAATAGCTCCAATTATCAAT ATTTTACTCTCAAAGATAATAAAAATGCTAATTCTATTTTGGCTTTGCCTGCCGGTCATGGTCAAAATTTTAAAATTTTA AAAGATATTTATTTAAAGCTTTATGAATCTGGTAAAAGATTTATATATATTGGTAATGTTGATAATATGGGCTTTACAAT TAATTTTAAAGCACTTGCTTTAATGGCTTTGACTAATTGTTCTTCTGGGTTTGAATTTAGTTTTAAAAGCAAAGCGGATT TTAAGGGAGGGATATTGGCAGTAAATGGTGAAAATCGTTTAACTTGTGTTGATATTGGCGGGGGGATTTCTTCAGAGATT GTGCAAGAGTTTGAAAATAAGGGTAATAGACTGCTGTTTAATTGTGCAACTGGACTTTTTAATTTAGAGTATTTGATAAA AAATATTGATGAAATAATAGAAAAAATGCCCATTAGAATTATAGAGCAAGATAAAGAAATTGGTAAATATATTTCGGTTG AGCAAATAACGTGGGAAGTGTTAAAATTAATAGAAAATCCATTAATTTTAACGGTTGATAGAAATAGAAGATTCCTTCCT GCAAAGTTATTTATTAACATGTTGCTTAATAGTAATCTTGAAGATATATGTGGATATTGTTGTAAAAAGGGGATCGATAA TTCTGCTAAGAATTTTAGCGCTCTTCCTGATTTGTTATCAAAAGATTATGGTTTGCTTTGTGGGCTATATAAATGGACTT TTTAA
Upstream 100 bases:
>100_bases TGAATGTTAAAGTTGATAAAATTTTTTCTGAAATGATACTTGAAAAACTTAATTCTGGCAAGATTTGTCCTAATACTTTT GAATCCATTAAATATTTTCC
Downstream 100 bases:
>100_bases AAACCTTTTCTTTTTTGTTTTTTAGCTTTTTTTGCTTAAATTTAATTGCGATAGAATCTTTACCAGAAATAGATTATGAA TATTTTAACAAGGATAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MRYHENIFNISDEILRFKFNKGLVEDNLKKYFHDFSKFLQSEEGDCYIFSSCDLENLGLMLFPYLSFGILNGGSATSYFD LAKNRALNEDLYMLYESKILEFKEKFGEFPKGITPAYINKDGSFGFSFLALKIRHLLMVAKRYESFCGKMIKPSIFQMTS CKTDEFISKSLDDLFADDLIKSVNFCNLKKEDVFTAVQPLVYCYEKLNSSNYQYFTLKDNKNANSILALPAGHGQNFKIL KDIYLKLYESGKRFIYIGNVDNMGFTINFKALALMALTNCSSGFEFSFKSKADFKGGILAVNGENRLTCVDIGGGISSEI VQEFENKGNRLLFNCATGLFNLEYLIKNIDEIIEKMPIRIIEQDKEIGKYISVEQITWEVLKLIENPLILTVDRNRRFLP AKLFINMLLNSNLEDICGYCCKKGIDNSAKNFSALPDLLSKDYGLLCGLYKWTF
Sequences:
>Translated_454_residues MRYHENIFNISDEILRFKFNKGLVEDNLKKYFHDFSKFLQSEEGDCYIFSSCDLENLGLMLFPYLSFGILNGGSATSYFD LAKNRALNEDLYMLYESKILEFKEKFGEFPKGITPAYINKDGSFGFSFLALKIRHLLMVAKRYESFCGKMIKPSIFQMTS CKTDEFISKSLDDLFADDLIKSVNFCNLKKEDVFTAVQPLVYCYEKLNSSNYQYFTLKDNKNANSILALPAGHGQNFKIL KDIYLKLYESGKRFIYIGNVDNMGFTINFKALALMALTNCSSGFEFSFKSKADFKGGILAVNGENRLTCVDIGGGISSEI VQEFENKGNRLLFNCATGLFNLEYLIKNIDEIIEKMPIRIIEQDKEIGKYISVEQITWEVLKLIENPLILTVDRNRRFLP AKLFINMLLNSNLEDICGYCCKKGIDNSAKNFSALPDLLSKDYGLLCGLYKWTF >Mature_454_residues MRYHENIFNISDEILRFKFNKGLVEDNLKKYFHDFSKFLQSEEGDCYIFSSCDLENLGLMLFPYLSFGILNGGSATSYFD LAKNRALNEDLYMLYESKILEFKEKFGEFPKGITPAYINKDGSFGFSFLALKIRHLLMVAKRYESFCGKMIKPSIFQMTS CKTDEFISKSLDDLFADDLIKSVNFCNLKKEDVFTAVQPLVYCYEKLNSSNYQYFTLKDNKNANSILALPAGHGQNFKIL KDIYLKLYESGKRFIYIGNVDNMGFTINFKALALMALTNCSSGFEFSFKSKADFKGGILAVNGENRLTCVDIGGGISSEI VQEFENKGNRLLFNCATGLFNLEYLIKNIDEIIEKMPIRIIEQDKEIGKYISVEQITWEVLKLIENPLILTVDRNRRFLP AKLFINMLLNSNLEDICGYCCKKGIDNSAKNFSALPDLLSKDYGLLCGLYKWTF
Specific function: Unknown
COG id: COG4284
COG function: function code G; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y003_BORBU (O51036)
Other databases:
- EMBL: AE000783 - PIR: C70100 - RefSeq: NP_212137.1 - ProteinModelPortal: O51036 - EnsemblBacteria: EBBORT00000009105 - GeneID: 1194839 - GenomeReviews: AE000783_GR - KEGG: bbu:BB0003 - NMPDR: fig|224326.1.peg.387 - TIGR: BB_0003 - GeneTree: EBGT00050000006881 - HOGENOM: HBG352884 - OMA: EQITWEV - ProtClustDB: CLSK507285 - InterPro: IPR002618 - InterPro: IPR016267 - PANTHER: PTHR11952 - PIRSF: PIRSF000806
Pfam domain/function: PF01704 UDPGP
EC number: NA
Molecular weight: Translated: 52013; Mature: 52013
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00879 ODR_DC_2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYHENIFNISDEILRFKFNKGLVEDNLKKYFHDFSKFLQSEEGDCYIFSSCDLENLGLM CCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH LFPYLSFGILNGGSATSYFDLAKNRALNEDLYMLYESKILEFKEKFGEFPKGITPAYINK HHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC DGSFGFSFLALKIRHLLMVAKRYESFCGKMIKPSIFQMTSCKTDEFISKSLDDLFADDLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH KSVNFCNLKKEDVFTAVQPLVYCYEKLNSSNYQYFTLKDNKNANSILALPAGHGQNFKIL HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHH KDIYLKLYESGKRFIYIGNVDNMGFTINFKALALMALTNCSSGFEFSFKSKADFKGGILA HHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEE VNGENRLTCVDIGGGISSEIVQEFENKGNRLLFNCATGLFNLEYLIKNIDEIIEKMPIRI ECCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHE IEQDKEIGKYISVEQITWEVLKLIENPLILTVDRNRRFLPAKLFINMLLNSNLEDICGYC ECCCHHHHHEECHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHH CKKGIDNSAKNFSALPDLLSKDYGLLCGLYKWTF HHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MRYHENIFNISDEILRFKFNKGLVEDNLKKYFHDFSKFLQSEEGDCYIFSSCDLENLGLM CCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH LFPYLSFGILNGGSATSYFDLAKNRALNEDLYMLYESKILEFKEKFGEFPKGITPAYINK HHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC DGSFGFSFLALKIRHLLMVAKRYESFCGKMIKPSIFQMTSCKTDEFISKSLDDLFADDLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH KSVNFCNLKKEDVFTAVQPLVYCYEKLNSSNYQYFTLKDNKNANSILALPAGHGQNFKIL HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHH KDIYLKLYESGKRFIYIGNVDNMGFTINFKALALMALTNCSSGFEFSFKSKADFKGGILA HHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEE VNGENRLTCVDIGGGISSEIVQEFENKGNRLLFNCATGLFNLEYLIKNIDEIIEKMPIRI ECCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHE IEQDKEIGKYISVEQITWEVLKLIENPLILTVDRNRRFLPAKLFINMLLNSNLEDICGYC ECCCHHHHHEECHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHH CKKGIDNSAKNFSALPDLLSKDYGLLCGLYKWTF HHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685