| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is 15594347
Identifier: 15594347
GI number: 15594347
Start: 105
End: 677
Strand: Direct
Name: 15594347
Synonym: BB0001
Alternate gene names: NA
Gene position: 105-677 (Clockwise)
Preceding gene: NA
Following gene: 15594350
Centisome position: 0.01
GC content: 23.04
Gene sequence:
>573_bases ATGATACTAATGAAGTATAGTGCTATTTTATTAATATGTAGCGTTAATTTATTTTGTTTTCAAAATAAATTAACTACTTC TCGATGGGAATTCCCTAAAGAAGATTTAATTAAAAAAAAAATAAAAATAGGCATAATTTACCATAATTACATAAATTCTA TCTTTTACAATGAAAATTATAAATACATTGCCTTTATCGGAATATTGACATCTTATAATGAATGGATTGAAATACAATTT AGCCCCATAAATTTTTTTACTATCCCAACAAATAAAGATTTTATTTCAAATACTTATTTCAATTTAGCTTTCACTATTTA CATTACCAAGTATTCAATTTTAACTGATACACTTGCTATAAAATTTTTTATTGGAACCCAAATCGATTTAACTCTGAGAA CTACTATATTTACAGGAAAAACAACTCATGCATTTCTCTATCCAATTCTTCCCATAATTACCTTCAAATTTGAAATTGAT TTCATACCTAATAACTATAGTATTTACTATAAATTATCGACTTCTTTTAAAGAATTTATCCTTTTAGATCTAGGAATTTC TATATTTATATAA
Upstream 100 bases:
>100_bases TATAATTTAATAGTATAAAAAAAATTAAATCAAATTAATAATAGTTTAAAAAACTGTTTGTATAATATAATATTATTATA TATAATATTAAGCAACTACT
Downstream 100 bases:
>100_bases TCCTTTTTTTATTATAGAACTTTTTTTATGGTATAAATTATTTAACACAAATTGTAAAAAGACCAAAAACAAATTTTCAA AACAATTTCACTAAGGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MILMKYSAILLICSVNLFCFQNKLTTSRWEFPKEDLIKKKIKIGIIYHNYINSIFYNENYKYIAFIGILTSYNEWIEIQF SPINFFTIPTNKDFISNTYFNLAFTIYITKYSILTDTLAIKFFIGTQIDLTLRTTIFTGKTTHAFLYPILPIITFKFEID FIPNNYSIYYKLSTSFKEFILLDLGISIFI
Sequences:
>Translated_190_residues MILMKYSAILLICSVNLFCFQNKLTTSRWEFPKEDLIKKKIKIGIIYHNYINSIFYNENYKYIAFIGILTSYNEWIEIQF SPINFFTIPTNKDFISNTYFNLAFTIYITKYSILTDTLAIKFFIGTQIDLTLRTTIFTGKTTHAFLYPILPIITFKFEID FIPNNYSIYYKLSTSFKEFILLDLGISIFI >Mature_190_residues MILMKYSAILLICSVNLFCFQNKLTTSRWEFPKEDLIKKKIKIGIIYHNYINSIFYNENYKYIAFIGILTSYNEWIEIQF SPINFFTIPTNKDFISNTYFNLAFTIYITKYSILTDTLAIKFFIGTQIDLTLRTTIFTGKTTHAFLYPILPIITFKFEID FIPNNYSIYYKLSTSFKEFILLDLGISIFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y001_BORBU (O51035)
Other databases:
- EMBL: AE000783 - EMBL: AF008218 - PIR: A70100 - RefSeq: NP_212135.1 - EnsemblBacteria: EBBORT00000009156 - GeneID: 1194837 - GenomeReviews: AE000783_GR - KEGG: bbu:BB0001 - NMPDR: fig|224326.1.peg.385 - TIGR: BB_0001 - GeneTree: EBGT00050000007625 - HOGENOM: HBG037239 - OMA: WIDFNII - ProtClustDB: CLSK2299154 - BioCyc: BBUR224326:BB_0001-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22492; Mature: 22492
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMKYSAILLICSVNLFCFQNKLTTSRWEFPKEDLIKKKIKIGIIYHNYINSIFYNENY CEEEEHHHEEEEEECEEEEEECCCCCCCCCCCHHHHHHEEEEEEEEEEHHHCEEEECCCC KYIAFIGILTSYNEWIEIQFSPINFFTIPTNKDFISNTYFNLAFTIYITKYSILTDTLAI EEEEEEEEECCCCEEEEEEECCEEEEECCCCCCHHCCEEEEEEEEEEEEEEEHHHHEEEE KFFIGTQIDLTLRTTIFTGKTTHAFLYPILPIITFKFEIDFIPNNYSIYYKLSTSFKEFI EEEECCEEEEEEEEEEEECCCCHHHHHHHHEEEEEEEEEEEECCCEEEEEEEECCCCEEE LLDLGISIFI EEEECEEEEC >Mature Secondary Structure MILMKYSAILLICSVNLFCFQNKLTTSRWEFPKEDLIKKKIKIGIIYHNYINSIFYNENY CEEEEHHHEEEEEECEEEEEECCCCCCCCCCCHHHHHHEEEEEEEEEEHHHCEEEECCCC KYIAFIGILTSYNEWIEIQFSPINFFTIPTNKDFISNTYFNLAFTIYITKYSILTDTLAI EEEEEEEEECCCCEEEEEEECCEEEEECCCCCCHHCCEEEEEEEEEEEEEEEHHHHEEEE KFFIGTQIDLTLRTTIFTGKTTHAFLYPILPIITFKFEIDFIPNNYSIYYKLSTSFKEFI EEEECCEEEEEEEEEEEECCCCHHHHHHHHEEEEEEEEEEEECCCEEEEEEEECCCCEEE LLDLGISIFI EEEECEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685; 9402027