Definition Deinococcus radiodurans R1 chromosome chromosome 1, complete sequence.
Accession NC_001263
Length 2,648,638

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The map label for this gene is rpoB

Identifier: 15805937

GI number:

Start: 923560

End: 927099

Strand: Reverse

Name: rpoB

Synonym: DR_0912

Alternate gene names: NA

Gene position: NA

Preceding gene: 15805940

Following gene: 15805936

Centisome position: NA

GC content: NA

Gene sequence:

>3540_bases
TTGCGCTTTTGGACCTGGACGAGAGCCGCAGCCCCGAGATTTCCAGCGTGCGAGGTGTGCATGACCCTGAGTAAGACTCC
CCCCCGCATCGAGCGGTTCGGTGACATCACCGAAGTGATTCCGCTCCCCAACCTGACCGAAGTGCAGGTCAACTCTTTCA
AAGCCTTTTTGCAAGACGACAAGGCCCCCGACCAGCGCGAAGACGTGGGGTTGCAAAGTGCTTTCCGCGAGGTCTTTCCC
ATCGACGAGTCCGAAAAGGGCCGCTCGACGGGCATGGTGCTCGACTTTATCGAGTATCGCCTCGGTGAACCCGAGTACAG
CCCCGAGGAGTGCCGCGAAAAAGACCTGACGTATGAAGCGCCCCTCTACGTCAAGCTCGAACTGATTCACAAAGACACTG
GCGTCATCAAGGGCTTCAAGCCCGACAGCCCGCCCGAAAGCTGGGTCTTCCTCGGCAACCTGCCGCTCATGACCTTCGAC
GGCTCGTTCATCATCAACGGCGCCGACCGCGTGGTCATCTCGCAGATCCACCGCTCGCCGGGCGTGTACTTCACGAGCTC
CTACAAGGGCATCAAGAAGCAGTACACCGCCGCCATCATTCCCATGCCCAAGCGTGGCCCCTGGATCGAACTCGAGTTCG
CGGGTGACGTGCTGGAAATGAAGGTCAACAAGCGCAAGTTCCCCGTCTCGCTGCTGCTGCGCGTGCTGGGCATGGACGAC
GCTTCGATTCGTGCGCTGTTCACCGAGTTCACGCCCGAAGTCGAACCCGGCGAAGACAAGAGCGCGGGCATGGGCGCCGA
CGAAGCCCTGCTGCGCCTGTTTACCGTGCTGCGCCCCGGCGACCCACCCAAGCGCGACAAGGCGATTCAGTACCTCTTCG
GGCTGCTCGCCGACCCGCGCCGCTACGACCTGGGCGAACCGGGCCGCTTCAAGATGAACACCAAGCTGGGCGTGCAGCGT
CAGGAACGCACCCTGCTGAAGTTCGAAGACGGCAAATTCAGCGACGCCGGGCTGGTGGACACCATCCGTTACCTGATGGC
GCTGCAACAGGGCCTCGAAACTGTGCCGATGGTGGACGAAGACGGCGTGGTGACCGACGTGCCCGTTGCCGAAGACGACA
TCGACCACCTCGGCAACCGCCGCGTGCGCACCGTGGGCGAACTGCTCGCCGACCAGCTGCGCGTGGGCATGGGCCGCATG
GCGCGTGGCGTGCGTGAGCGCATGCTGCTCGGCAACCCCGACGCCGCGACCCCCACCAAACTGGTCAACAACCGCCCCAT
CGTGGCAGCGATGCGCGAGTTCTTTGGCCGCTCGCAGCTCTCGCAGTTCAAGGACCAGACCAACCCGCTCTCCGATCTGC
GCCACAAGCGCCGCATCTCCGCGCTGGGGCCGGGCGGTCTGACCCGCGAGCGCGCCGGCTTCGACGTGCGCGACGTGCAC
CGCACCCACTACGGGCGCATCTGCCCGATCGAAACGCCCGAAGGCGCCAACATCGGTCTGATTTCCTCGCTGTCGAGCTA
CGCCAAAGTCAACGACCTCGGCTTCATCATGGCGCCCTACCGCAAGGTGGAGGACGGCAAGGTGACCAATCAGGTCGAGT
ACATGACCGCCGATATCGAGGACCGTTACACCATCGCGCAGGCGAACAGCCCGCTCAACGAAGACAACACCTTCGCCGAC
GAGCGCGTGCTGGCCCGCCGCAAGGGTGACCCGCTGCTCTACACGCCCGACGAAGTCGATTACATGGACGTGTCGCCCAA
GCAGATCGTGTCCATCAACACCTCGCTGATTCCCTTCCTGGAGCACGACGACGCCAACCGCGCGCTGATGGGTTCGAACA
TGCAGTCGCAAGCCGTGCCGCTTGTGCGTGCCGACTCCCCCGCCGTGGGCACCGGCGTCGAGCGCCGCGTGGTGACCGAC
TCGGGCACCAGCGTCGTGAGCGACGTGAATGGCCGCGTGAGCTACGTGGACGCCCGCGCCATTCAGGTGACGCTGAGCGA
AGACCACCGCGAACTCAACATGAACGCGGGCAACGTCCGCACCTTTGAGCTGATCCGCTTTACCCGCTCCAACCAGGGCA
CCAACCTCGACCAGCACCCCATCGTGAGCGTGGGTGACGAGGTCAAGGTCGGCCAGGTCATCGCCGACGGCCCGGCGTCC
GAGCGCGGGCGGCTGGCGCTGGGGCAGAACATCACCATCGCCATCATGCCCTTCGACGGCTTCAACTTCGAAGACGCCAT
CTGCATCAACGAAGACCTCGTGCGTCAGGACTTTTACACCTCAGTCCACATCGAGAAGGACGAGATCGAAGCCCGCGACA
CCAAGCTGGGGCCGGAAAAGATCACCCGCGATATTCCGGGCCTGTCCGAAGCCGCGCTGCGTGACCTCGACGAAGACGGC
ATCGTGCGCGTGGGCGCCGAAGTCAAGCCCGGCGACATCCTGGTCGGCAAGACCTCCTTCAAGGGCGAGTCCGAACCCAC
CCCCGAAGAGCGGCTGCTGCGCTCGATCTTCGGTGAGAAGGCCCGTGAAGTGAAAGACACCTCGCTGCGCGTGCAGTCGG
GTCAGGGCGGCATCGTCGTCAAGACCGTGCGCTTCCGCCGCGGCGACGAAGGCGTGGACCTCAAGCCCGGCGTGCGCGAG
ATGGTGCGCGTGTACGTGGCCCAGAAGCGTCAGCTTCAGGTGGGCGACAAGGTGGCGAACCGCCACGGCAACAAGGGCGT
CGTGTCCAAGATTGTGCGCCCCGAAGACATGCCTTACCTCGAAGACGGCACCCCCGTCGACATCGTGTTCAACCCGCTGG
GTGTGCCTTCGCGCATGAACCTCGGGCAGATTCTCGAAACCCACCTCGGTGAAGTCGCGCGCCTGACCGGCCAGAAGTTC
GAGACCCCGGTGTTCGACTCGGTGACCGAAGCGACCATCAAGGAAATGCTCGAAGTGGCCGCAGCCGAACGTCTCCAGGC
CAGAAAAGACGACGGCTTCGAACTCGACAAGCGTGAGCAGGAAGTGCTCGACCGCGCCGGCAAGCTCGGTGTGATCGACG
CCCCCGGCGACGACTACGAGAAGGGCCAGATGCAGCTCGCCCGCACCGGCAAGAGCATCCTGTACGACGGACGCACCGGC
GAGCCGATCAGCGGCCCCGTGGTGGTCGGCATCATGTACGTGATGAAGCTCTACCACATGGTGGAAGACAAGCTGCACGC
CCGCTCCACCGGCCCCTACTCGCTCATTACCCAGCAGCCGCTCGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCG
AAATGGAAGTGTGGGCCCTCGAAGCCTACGGCGCGGCGCACGTGCTCCAGGAAATGCTCACCATCAAGTCCGACGACATC
GACGGCCGCGACGCCGCTTACCAGAGCATCGTCAAGGGCGAAGAAGTCTCGGGCAGCACCATCCCCGAGTCCTTCAAGGT
GCTGGTCAAGGAACTCCACTCGCTCGGTCTGGACGTCGAGGTGCTCGACCACGGCGACAAGGCCGTGGACATCTTTGAAG
GGATGATGCCCAAGCGCTAA

Upstream 100 bases:

>100_bases
GGGTTGGACAGGGGTTCTTTGCCGGAACGTGAATCACAAGTATACATGGCAACAATAGGTCTTTTTTCCGAGGAGCGCAG
GCGAGAGCCGGCGGTCCCAG

Downstream 100 bases:

>100_bases
GGCGCCTGCGGCACTGCCAACCCGTCGAGCACTGTCAAACCGTCTAAAGGTCAAACCGCCAACATCTTTCAGCCGTTCGA
CGGTGAGACAGTTCGACGGT

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1179_residues
MRFWTWTRAAAPRFPACEVCMTLSKTPPRIERFGDITEVIPLPNLTEVQVNSFKAFLQDDKAPDQREDVGLQSAFREVFP
IDESEKGRSTGMVLDFIEYRLGEPEYSPEECREKDLTYEAPLYVKLELIHKDTGVIKGFKPDSPPESWVFLGNLPLMTFD
GSFIINGADRVVISQIHRSPGVYFTSSYKGIKKQYTAAIIPMPKRGPWIELEFAGDVLEMKVNKRKFPVSLLLRVLGMDD
ASIRALFTEFTPEVEPGEDKSAGMGADEALLRLFTVLRPGDPPKRDKAIQYLFGLLADPRRYDLGEPGRFKMNTKLGVQR
QERTLLKFEDGKFSDAGLVDTIRYLMALQQGLETVPMVDEDGVVTDVPVAEDDIDHLGNRRVRTVGELLADQLRVGMGRM
ARGVRERMLLGNPDAATPTKLVNNRPIVAAMREFFGRSQLSQFKDQTNPLSDLRHKRRISALGPGGLTRERAGFDVRDVH
RTHYGRICPIETPEGANIGLISSLSSYAKVNDLGFIMAPYRKVEDGKVTNQVEYMTADIEDRYTIAQANSPLNEDNTFAD
ERVLARRKGDPLLYTPDEVDYMDVSPKQIVSINTSLIPFLEHDDANRALMGSNMQSQAVPLVRADSPAVGTGVERRVVTD
SGTSVVSDVNGRVSYVDARAIQVTLSEDHRELNMNAGNVRTFELIRFTRSNQGTNLDQHPIVSVGDEVKVGQVIADGPAS
ERGRLALGQNITIAIMPFDGFNFEDAICINEDLVRQDFYTSVHIEKDEIEARDTKLGPEKITRDIPGLSEAALRDLDEDG
IVRVGAEVKPGDILVGKTSFKGESEPTPEERLLRSIFGEKAREVKDTSLRVQSGQGGIVVKTVRFRRGDEGVDLKPGVRE
MVRVYVAQKRQLQVGDKVANRHGNKGVVSKIVRPEDMPYLEDGTPVDIVFNPLGVPSRMNLGQILETHLGEVARLTGQKF
ETPVFDSVTEATIKEMLEVAAAERLQARKDDGFELDKREQEVLDRAGKLGVIDAPGDDYEKGQMQLARTGKSILYDGRTG
EPISGPVVVGIMYVMKLYHMVEDKLHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHVLQEMLTIKSDDI
DGRDAAYQSIVKGEEVSGSTIPESFKVLVKELHSLGLDVEVLDHGDKAVDIFEGMMPKR

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA