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The map label for this gene is yxaL

Identifier: 50812309

GI number: 50812309

Start: 4102429

End: 4103661

Strand: Reverse

Name: yxaL

Synonym: BSU39940

Alternate gene names: 50812309

Gene position: 4103661-4102429 (Counterclockwise)

Preceding gene: 255767858

Following gene: 16081039

Centisome position: 97.34

GC content: 48.42

Gene sequence:

>1233_bases
ATGGTCAAGTCATTTCGTATGAAAGCTTTGATTGCGGGAGCTGCGGTGGCGGCGGCTGTTTCGGCCGGCGCTGTTTCTGA
TGTGCCCGCTGCCAAAGTGCTTCAGCCGACAGCTGCTTATGCGGCGGAAACGGTGTTTTCTCAAAATAATGGAGCATCTG
GCTTTTTGCCAGGAAGATATGATGTACAAGCGATGGCGCCTGCCATGTTTAACTGGTCACGCGAAAGCCGGTTCGCCGGA
AATACAGACGGGACGCTGAAATGGCAAAACGACATCAGAACGACTCCGCAAAATGGAGCGGGGGCTGTGATTGACGGAGA
CGGCACAGTATATCTTCATTCCAGAGACGGGGAAATGAAAGCCTTTAATCCAGACGGCTCAGTCAAATGGGTGACGGGCA
ATCTTGGAAAAACATATACGCAATCTCCTGTACTTGGGACCAACGGCGTTATCTATTTGGCATCCTATGACAAAAAGATT
TATTTTATTGACAAAGAAACGGGAGAAATTTTAACAACGGTTCCGTTAAGCGGCGGGCCAAGCTCTGAAACGGTGATCGG
TTCAGACGGGACGTTGTATTTCTCAACACTTGATAATTATGTTCACGCGATCAAACCGACGTCAAAATCAACCTGGACAG
AGCGCTGGAAGTTGAAAACAAATGGGGTCGTCAGCTCTGTGCCGGTGCTTGCCAAAAACGGCACCGTGTATGTCGGCACA
TATAATTACGTGTTTTATGCGATCAACTCCGGAACCGGACAGGTGAAATGGTCCAGAACGACGTCAAATGCGTTTAAAGG
ATATCCGGTGATTGATAAGGACGGAAACATTTATGCCGGCAACCAAGATGGACAGCTGTATGCTTATACATCAACAGGCA
GTTTGAAATGGACATTCCCGCTAAACGGGTTCTCCAGCTCATCTCCTGCGATTGATCATAATGGCAATATCTACATCGGC
TCAGGAAGCGGCGAGCTGTTTTCCATCAGCAAAAACGGGGATATGAACTGGTCATTCTACACAGACGGCCCTGTCAGAAC
GGCGCCGCTGATTGACGCGAAGGGAACGGTTTATTTCGGGTCAGATGATATGAAGGTTTATGCGGCAGACGCAAACGGCA
ATGAATTATGGAGCTATCAAACCGACAGCAACGTCGTGTCTTCTCCTCAGCTCGCTGAGGACGGAACACTTTATATTGGA
AGTTATACGAAGCTGATGGCTTTTGGGAAATAA

Upstream 100 bases:

>100_bases
TTTTCTAGTTTGTGATGTTTTTGTGAAATAGATTTATAAAATGGATGAATATGTTATGATGGTCACAAATTAGAAGTTAC
ATATAATGGGGGTCTCAATG

Downstream 100 bases:

>100_bases
CTGAATAGAATAGCAGAAGACCTTCTTTTAATAAGAAGGTCTTCTTACTGTGATACAAAACATTTACACTTGCTGGGATT
TTTCAATCTGAACTTTCATA

Product: membrane associated protein kinase with beta-propeller domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MVKSFRMKALIAGAAVAAAVSAGAVSDVPAAKVLQPTAAYAAETVFSQNNGASGFLPGRYDVQAMAPAMFNWSRESRFAG
NTDGTLKWQNDIRTTPQNGAGAVIDGDGTVYLHSRDGEMKAFNPDGSVKWVTGNLGKTYTQSPVLGTNGVIYLASYDKKI
YFIDKETGEILTTVPLSGGPSSETVIGSDGTLYFSTLDNYVHAIKPTSKSTWTERWKLKTNGVVSSVPVLAKNGTVYVGT
YNYVFYAINSGTGQVKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAYTSTGSLKWTFPLNGFSSSSPAIDHNGNIYIG
SGSGELFSISKNGDMNWSFYTDGPVRTAPLIDAKGTVYFGSDDMKVYAADANGNELWSYQTDSNVVSSPQLAEDGTLYIG
SYTKLMAFGK

Sequences:

>Translated_410_residues
MVKSFRMKALIAGAAVAAAVSAGAVSDVPAAKVLQPTAAYAAETVFSQNNGASGFLPGRYDVQAMAPAMFNWSRESRFAG
NTDGTLKWQNDIRTTPQNGAGAVIDGDGTVYLHSRDGEMKAFNPDGSVKWVTGNLGKTYTQSPVLGTNGVIYLASYDKKI
YFIDKETGEILTTVPLSGGPSSETVIGSDGTLYFSTLDNYVHAIKPTSKSTWTERWKLKTNGVVSSVPVLAKNGTVYVGT
YNYVFYAINSGTGQVKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAYTSTGSLKWTFPLNGFSSSSPAIDHNGNIYIG
SGSGELFSISKNGDMNWSFYTDGPVRTAPLIDAKGTVYFGSDDMKVYAADANGNELWSYQTDSNVVSSPQLAEDGTLYIG
SYTKLMAFGK
>Mature_410_residues
MVKSFRMKALIAGAAVAAAVSAGAVSDVPAAKVLQPTAAYAAETVFSQNNGASGFLPGRYDVQAMAPAMFNWSRESRFAG
NTDGTLKWQNDIRTTPQNGAGAVIDGDGTVYLHSRDGEMKAFNPDGSVKWVTGNLGKTYTQSPVLGTNGVIYLASYDKKI
YFIDKETGEILTTVPLSGGPSSETVIGSDGTLYFSTLDNYVHAIKPTSKSTWTERWKLKTNGVVSSVPVLAKNGTVYVGT
YNYVFYAINSGTGQVKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAYTSTGSLKWTFPLNGFSSSSPAIDHNGNIYIG
SGSGELFSISKNGDMNWSFYTDGPVRTAPLIDAKGTVYFGSDDMKVYAADANGNELWSYQTDSNVVSSPQLAEDGTLYIG
SYTKLMAFGK

Specific function: Increases the processivity of the pcrA helicase, but does not bind to DNA

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Secreted

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI45580730, Length=288, Percent_Identity=25.6944444444444, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXAL_BACSU (P42111)

Other databases:

- EMBL:   AB005554
- EMBL:   AB005554
- EMBL:   AL009126
- PIR:   B70072
- PIR:   C70072
- RefSeq:   NP_391873.2
- ProteinModelPortal:   P42111
- SMR:   P42111
- EnsemblBacteria:   EBBACT00000001748
- GeneID:   937661
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39940
- GenoList:   BSU39940
- GeneTree:   EBGT00050000001854
- HOGENOM:   HBG338495
- OMA:   GTEKWRF
- ProtClustDB:   CLSK928158
- BioCyc:   BSUB:BSU39940-MONOMER
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047
- Gene3D:   G3DSA:2.140.10.10
- SMART:   SM00564

Pfam domain/function: PF01011 PQQ; SSF50998 Quin_alc_DH_like

EC number: NA

Molecular weight: Translated: 43877; Mature: 43877

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSFRMKALIAGAAVAAAVSAGAVSDVPAAKVLQPTAAYAAETVFSQNNGASGFLPGRY
CCCCCEEHEEHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHEECCCCCCCCCCCCC
DVQAMAPAMFNWSRESRFAGNTDGTLKWQNDIRTTPQNGAGAVIDGDGTVYLHSRDGEMK
CHHHHCHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCEE
AFNPDGSVKWVTGNLGKTYTQSPVLGTNGVIYLASYDKKIYFIDKETGEILTTVPLSGGP
EECCCCCEEEEECCCCCCEECCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCC
SSETVIGSDGTLYFSTLDNYVHAIKPTSKSTWTERWKLKTNGVVSSVPVLAKNGTVYVGT
CCCEEECCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCEECCCEEECCCEEEEEE
YNYVFYAINSGTGQVKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAYTSTGSLKWTFP
EEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCEEECCCCCEEEEEECCCCEEEEEE
LNGFSSSSPAIDHNGNIYIGSGSGELFSISKNGDMNWSFYTDGPVRTAPLIDAKGTVYFG
CCCCCCCCCCEECCCCEEEECCCCCEEEEECCCCCCEEEEECCCCEEEEEECCCCEEEEC
SDDMKVYAADANGNELWSYQTDSNVVSSPQLAEDGTLYIGSYTKLMAFGK
CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEECC
>Mature Secondary Structure
MVKSFRMKALIAGAAVAAAVSAGAVSDVPAAKVLQPTAAYAAETVFSQNNGASGFLPGRY
CCCCCEEHEEHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHEECCCCCCCCCCCCC
DVQAMAPAMFNWSRESRFAGNTDGTLKWQNDIRTTPQNGAGAVIDGDGTVYLHSRDGEMK
CHHHHCHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCEE
AFNPDGSVKWVTGNLGKTYTQSPVLGTNGVIYLASYDKKIYFIDKETGEILTTVPLSGGP
EECCCCCEEEEECCCCCCEECCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCC
SSETVIGSDGTLYFSTLDNYVHAIKPTSKSTWTERWKLKTNGVVSSVPVLAKNGTVYVGT
CCCEEECCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCEECCCEEECCCEEEEEE
YNYVFYAINSGTGQVKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAYTSTGSLKWTFP
EEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCEEECCCCCEEEEEECCCCEEEEEE
LNGFSSSSPAIDHNGNIYIGSGSGELFSISKNGDMNWSFYTDGPVRTAPLIDAKGTVYFG
CCCCCCCCCCEECCCCEEEECCCCCEEEEECCCCCCEEEEECCCCEEEEEECCCCEEEEC
SDDMKVYAADANGNELWSYQTDSNVVSSPQLAEDGTLYIGSYTKLMAFGK
CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751; 10658653