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The map label for this gene is med

Identifier: 50812218

GI number: 50812218

Start: 1206629

End: 1207582

Strand: Direct

Name: med

Synonym: BSU11300

Alternate gene names: 50812218

Gene position: 1206629-1207582 (Clockwise)

Preceding gene: 255767256

Following gene: 16078196

Centisome position: 28.62

GC content: 43.08

Gene sequence:

>954_bases
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Upstream 100 bases:

>100_bases
CAAATATTAAGAAAAACCTTCCATGTTTCGAGTTTTCTAGATACAATAAACGTATAAAAATAATACATGTTATAGCTTGT
CAAAAGGAGTTGAACATGAC

Downstream 100 bases:

>100_bases
TGGAGTGACGTCACATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAA
CAGCTTGAGAAATCAGGCAT

Product: positive regulator of comK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Sequences:

>Translated_317_residues
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
>Mature_317_residues
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Specific function: Positive activator of the comK gene

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MED_BACSU (O32436)

Other databases:

- EMBL:   D86376
- EMBL:   AL009126
- PIR:   D69656
- RefSeq:   NP_389012.2
- ProteinModelPortal:   O32436
- SMR:   O32436
- EnsemblBacteria:   EBBACT00000000715
- GeneID:   936388
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11300
- NMPDR:   fig|224308.1.peg.1131
- GenoList:   BSU11300
- GeneTree:   EBGT00050000001944
- HOGENOM:   HBG313732
- OMA:   VISINSW
- ProtClustDB:   CLSK873451
- BioCyc:   BSUB:BSU11300-MONOMER
- GO:   GO:0006350
- InterPro:   IPR003760

Pfam domain/function: PF02608 Bmp

EC number: NA

Molecular weight: Translated: 35311; Mature: 35311

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNV
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEECCCHHHHHHCCCCCCCEEEEECCCCCE
DVYYKEGVKTEEDIINAIEDFHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAK
EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCHHEEEECCCCC
ADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQPEVDGFIKGAKYENPDIEVN
CCCEEEEEECCCCHHHHCCHHHHHHCCCCCEEEEEEEECCCCCCHHEECCCCCCCCEEEE
TKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCC
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHH
AKLIKTYNKTGELPKNE
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNV
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEECCCHHHHHHCCCCCCCEEEEECCCCCE
DVYYKEGVKTEEDIINAIEDFHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAK
EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCHHEEEECCCCC
ADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQPEVDGFIKGAKYENPDIEVN
CCCEEEEEECCCCHHHHCCHHHHHHCCCCCEEEEEEEECCCCCCHHEECCCCCCCCEEEE
TKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCC
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHH
AKLIKTYNKTGELPKNE
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377