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The map label for this gene is paiB

Identifier: 255767738

GI number: 255767738

Start: 3304096

End: 3304719

Strand: Reverse

Name: paiB

Synonym: BSU32140

Alternate gene names: 255767738

Gene position: 3304719-3304096 (Counterclockwise)

Preceding gene: 16080268

Following gene: 16080265

Centisome position: 78.39

GC content: 36.22

Gene sequence:

>624_bases
ATGTATATTCCAAAATATTTTAAAGTCACAAATGCTGAAGAAATTTGGAATTTTGTACAAGAAAACTCCTTTGGTACGGT
TGTCACAACAGAACAAGGAAAACCAATTGCCACACATTTGCCGTTAGGATTCAATAAAAAAGACGATCATTACTATATTA
CGGGGCATTTCGCTTATGGAAATCCTCAGTGGAGAACGTTTGAAGCCTGTGAAGATGTGCTTGTGATGTTTCAGGGACCG
CACGCTTATATTTCTTCTTCCTGGTATTCGCGCGAAAATGTTCCGACGTGGAATTATCAGGCTGTCCACATGTATGGAAA
AGCAAGTATGTTAGAGAAAGATGAATTAGCAGAAGAATTAACAATCATGTTGGAGAAATACGAAAAACATCGTGACAATC
CTGTGTTATGGGATAAGCTTTCTCCAAAACTCTTAGAAAGTGAATTGAAAGGTATTGTTGGATTTAAGATTAAGGTGGAA
GACATTCAAGCGGCATATAAATTAAGCCAGAACCGAAATGAAACGGATTATATGAACGTCATTGAACAGTTGCAAAATGA
AGAAAATCCAAATGCAAAACAAATGGCAGAACTGATGGAAGATAAACTCAAAAAGCAAATATAA

Upstream 100 bases:

>100_bases
TTCAGACCGGCGCCCACTCATTTTATATGGGTGATGAAGAACAAACGGATTTAATCATGGCTAAAACACTCATATAATAT
TTTTCGAAGGGTGGATGATG

Downstream 100 bases:

>100_bases
GCTTACTTTGCTGAAGAAGTAGCAGAAAACGCCAACTCAAGCGGAGAACCGCTGACTTGGCGTTTTTTTATGATTAATAT
TTATCCCCATTAAAAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MYIPKYFKVTNAEEIWNFVQENSFGTVVTTEQGKPIATHLPLGFNKKDDHYYITGHFAYGNPQWRTFEACEDVLVMFQGP
HAYISSSWYSRENVPTWNYQAVHMYGKASMLEKDELAEELTIMLEKYEKHRDNPVLWDKLSPKLLESELKGIVGFKIKVE
DIQAAYKLSQNRNETDYMNVIEQLQNEENPNAKQMAELMEDKLKKQI

Sequences:

>Translated_207_residues
MYIPKYFKVTNAEEIWNFVQENSFGTVVTTEQGKPIATHLPLGFNKKDDHYYITGHFAYGNPQWRTFEACEDVLVMFQGP
HAYISSSWYSRENVPTWNYQAVHMYGKASMLEKDELAEELTIMLEKYEKHRDNPVLWDKLSPKLLESELKGIVGFKIKVE
DIQAAYKLSQNRNETDYMNVIEQLQNEENPNAKQMAELMEDKLKKQI
>Mature_207_residues
MYIPKYFKVTNAEEIWNFVQENSFGTVVTTEQGKPIATHLPLGFNKKDDHYYITGHFAYGNPQWRTFEACEDVLVMFQGP
HAYISSSWYSRENVPTWNYQAVHMYGKASMLEKDELAEELTIMLEKYEKHRDNPVLWDKLSPKLLESELKGIVGFKIKVE
DIQAAYKLSQNRNETDYMNVIEQLQNEENPNAKQMAELMEDKLKKQI

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAIB_BACSU (P21341)

Other databases:

- EMBL:   M36471
- EMBL:   AL009126
- EMBL:   Z93939
- PIR:   B35145
- PIR:   F69671
- RefSeq:   NP_391094.2
- ProteinModelPortal:   P21341
- SMR:   P21341
- EnsemblBacteria:   EBBACT00000000825
- GeneID:   936588
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32140
- NMPDR:   fig|224308.1.peg.3220
- GenoList:   BSU32140
- GeneTree:   EBGT00050000002859
- HOGENOM:   HBG360638
- PhylomeDB:   P21341
- ProtClustDB:   CLSK887823
- BioCyc:   BSUB:BSU32140-MONOMER
- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002
- Gene3D:   G3DSA:2.30.110.10

Pfam domain/function: PF04299 FMN_bind_2; SSF50475 FMN_binding

EC number: NA

Molecular weight: Translated: 24284; Mature: 24284

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPKYFKVTNAEEIWNFVQENSFGTVVTTEQGKPIATHLPLGFNKKDDHYYITGHFAYG
CCCCCCEEECCHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCEEEEEEEEECC
NPQWRTFEACEDVLVMFQGPHAYISSSWYSRENVPTWNYQAVHMYGKASMLEKDELAEEL
CCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCHHHCCHHHHHHHH
TIMLEKYEKHRDNPVLWDKLSPKLLESELKGIVGFKIKVEDIQAAYKLSQNRNETDYMNV
HHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCCHHHHHH
IEQLQNEENPNAKQMAELMEDKLKKQI
HHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYIPKYFKVTNAEEIWNFVQENSFGTVVTTEQGKPIATHLPLGFNKKDDHYYITGHFAYG
CCCCCCEEECCHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCEEEEEEEEECC
NPQWRTFEACEDVLVMFQGPHAYISSSWYSRENVPTWNYQAVHMYGKASMLEKDELAEEL
CCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCHHHCCHHHHHHHH
TIMLEKYEKHRDNPVLWDKLSPKLLESELKGIVGFKIKVEDIQAAYKLSQNRNETDYMNV
HHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCCHHHHHH
IEQLQNEENPNAKQMAELMEDKLKKQI
HHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377