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The map label for this gene is araA

Identifier: 255767664

GI number: 255767664

Start: 2947385

End: 2948875

Strand: Reverse

Name: araA

Synonym: BSU28800

Alternate gene names: 255767664

Gene position: 2948875-2947385 (Counterclockwise)

Preceding gene: 255767665

Following gene: 16079931

Centisome position: 69.95

GC content: 47.62

Gene sequence:

>1491_bases
ATGCTTCAGACAAAGGATTATGAATTCTGGTTTGTGACAGGAAGCCAGCACCTATACGGGGAAGAGACGCTGGAACTCGT
AGATCAGCATGCTAAAAGCATTTGTGAGGGGCTCAGCGGGATTTCTTCCAGATATAAAATCACTCATAAGCCCGTCGTCA
CTTCACCGGAAACCATTAGAGAGCTGTTAAGAGAAGCGGAGTACAGTGAGACATGTGCTGGCATCATTACATGGATGCAC
ACATTTTCCCCTGCAAAAATGTGGATAGAAGGCCTTTCCTCTTATCAAAAACCGCTTATGCATTTGCATACCCAATATAA
TCGCGATATCCCGTGGGGTACGATTGACATGGATTTTATGAACAGCAACCAATCCGCGCATGGCGATCGAGAGTACGGTT
ACATCAACTCGAGAATGGGGCTTAGCCGAAAAGTCATTGCCGGCTATTGGGATGATGAAGAAGTGAAAAAAGAAATGTCC
CAGTGGATGGATACGGCGGCTGCATTAAATGAAAGCAGACATATTAAGGTTGCCAGATTTGGAGATAACATGCGTCATGT
CGCGGTAACGGACGGAGACAAGGTGGGAGCGCATATTCAATTTGGCTGGCAGGTTGACGGATATGGCATCGGGGATCTCG
TTGAAGTGATGGATCGCATTACGGACGACGAGGTTGACACGCTTTATGCCGAGTATGACAGACTATATGTGATCAGTGAG
GAAACAAAACGTGACGAAGCAAAGGTAGCGTCCATTAAAGAACAGGCGAAAATTGAACTTGGATTAACCGCTTTTCTTGA
GCAAGGCGGATACACAGCGTTTACGACATCGTTTGAAGTGCTGCACGGAATGAAACAGCTGCCGGGACTTGCCGTTCAGC
GCCTGATGGAGAAAGGCTATGGGTTTGCCGGTGAAGGAGATTGGAAGACAGCGGCCCTTGTACGGATGATGAAAATCATG
GCTAAAGGAAAAAGAACTTCCTTCATGGAAGATTACACGTACCATTTTGAACCGGGAAATGAAATGATTCTGGGCTCTCA
CATGCTTGAAGTGTGTCCGACTGTCGCTTTGGATCAGCCGAAAATCGAGGTTCATTCGCTTTCGATTGGCGGCAAAGAGG
ACCCTGCGCGTTTGGTATTTAACGGCATCAGCGGTTCTGCCATTCAAGCTAGCATTGTTGATATTGGCGGGCGTTTCCGC
CTTGTGCTGAATGAAGTCAACGGCCAGGAAATTGAAAAAGACATGCCGAATTTACCGGTTGCCCGTGTTCTCTGGAAGCC
GGAGCCGTCATTGAAAACAGCAGCGGAGGCATGGATTTTAGCCGGCGGTGCACACCATACCTGCCTGTCTTATGAACTGA
CAGCGGAGCAAATGCTTGATTGGGCGGAAATGGCGGGAATCGAAAGTGTTCTCATTTCCCGTGATACGACAATTCATAAA
CTGAAACACGAGTTAAAATGGAACGAGGCGCTTTACCGGCTTCAAAAGTAG

Upstream 100 bases:

>100_bases
ATTGTTCGTACAAATATTTATTTATAGGTTTATTTTCTATCATTAGTACGTATCTTTTGTATTTGAAAGCGTTTTATTTT
ATGAGAAAGGGGCAGTTTAC

Downstream 100 bases:

>100_bases
AGGGGGATGTCACATGGCTTACACAATAGGGGTTGATTTTGGAACTTTATCAGGAAGAGCAGTGCTCGTTCATGTCCAAA
CAGGGGAGGAACTTGCGGCT

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MLQTKDYEFWFVTGSQHLYGEETLELVDQHAKSICEGLSGISSRYKITHKPVVTSPETIRELLREAEYSETCAGIITWMH
TFSPAKMWIEGLSSYQKPLMHLHTQYNRDIPWGTIDMDFMNSNQSAHGDREYGYINSRMGLSRKVIAGYWDDEEVKKEMS
QWMDTAAALNESRHIKVARFGDNMRHVAVTDGDKVGAHIQFGWQVDGYGIGDLVEVMDRITDDEVDTLYAEYDRLYVISE
ETKRDEAKVASIKEQAKIELGLTAFLEQGGYTAFTTSFEVLHGMKQLPGLAVQRLMEKGYGFAGEGDWKTAALVRMMKIM
AKGKRTSFMEDYTYHFEPGNEMILGSHMLEVCPTVALDQPKIEVHSLSIGGKEDPARLVFNGISGSAIQASIVDIGGRFR
LVLNEVNGQEIEKDMPNLPVARVLWKPEPSLKTAAEAWILAGGAHHTCLSYELTAEQMLDWAEMAGIESVLISRDTTIHK
LKHELKWNEALYRLQK

Sequences:

>Translated_496_residues
MLQTKDYEFWFVTGSQHLYGEETLELVDQHAKSICEGLSGISSRYKITHKPVVTSPETIRELLREAEYSETCAGIITWMH
TFSPAKMWIEGLSSYQKPLMHLHTQYNRDIPWGTIDMDFMNSNQSAHGDREYGYINSRMGLSRKVIAGYWDDEEVKKEMS
QWMDTAAALNESRHIKVARFGDNMRHVAVTDGDKVGAHIQFGWQVDGYGIGDLVEVMDRITDDEVDTLYAEYDRLYVISE
ETKRDEAKVASIKEQAKIELGLTAFLEQGGYTAFTTSFEVLHGMKQLPGLAVQRLMEKGYGFAGEGDWKTAALVRMMKIM
AKGKRTSFMEDYTYHFEPGNEMILGSHMLEVCPTVALDQPKIEVHSLSIGGKEDPARLVFNGISGSAIQASIVDIGGRFR
LVLNEVNGQEIEKDMPNLPVARVLWKPEPSLKTAAEAWILAGGAHHTCLSYELTAEQMLDWAEMAGIESVLISRDTTIHK
LKHELKWNEALYRLQK
>Mature_496_residues
MLQTKDYEFWFVTGSQHLYGEETLELVDQHAKSICEGLSGISSRYKITHKPVVTSPETIRELLREAEYSETCAGIITWMH
TFSPAKMWIEGLSSYQKPLMHLHTQYNRDIPWGTIDMDFMNSNQSAHGDREYGYINSRMGLSRKVIAGYWDDEEVKKEMS
QWMDTAAALNESRHIKVARFGDNMRHVAVTDGDKVGAHIQFGWQVDGYGIGDLVEVMDRITDDEVDTLYAEYDRLYVISE
ETKRDEAKVASIKEQAKIELGLTAFLEQGGYTAFTTSFEVLHGMKQLPGLAVQRLMEKGYGFAGEGDWKTAALVRMMKIM
AKGKRTSFMEDYTYHFEPGNEMILGSHMLEVCPTVALDQPKIEVHSLSIGGKEDPARLVFNGISGSAIQASIVDIGGRFR
LVLNEVNGQEIEKDMPNLPVARVLWKPEPSLKTAAEAWILAGGAHHTCLSYELTAEQMLDWAEMAGIESVLISRDTTIHK
LKHELKWNEALYRLQK

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family

Homologues:

Organism=Escherichia coli, GI1786248, Length=495, Percent_Identity=52.9292929292929, Blast_Score=569, Evalue=1e-163,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARAA_BACSU (P94523)

Other databases:

- EMBL:   X89408
- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   C69587
- RefSeq:   NP_390758.2
- ProteinModelPortal:   P94523
- SMR:   P94523
- EnsemblBacteria:   EBBACT00000004100
- GeneID:   936764
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28800
- GenoList:   BSU28800
- GeneTree:   EBGT00050000001793
- HOGENOM:   HBG297198
- PhylomeDB:   P94523
- ProtClustDB:   PRK02929
- BioCyc:   BSUB:BSU28800-MONOMER
- BRENDA:   5.3.1.4
- GO:   GO:0005737
- HAMAP:   MF_00519
- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- PIRSF:   PIRSF001478
- ProDom:   PD018364

Pfam domain/function: PF02610 Arabinose_Isome; SSF50443 Fuc_isomerase_C; SSF53743 Fuc_isomerase_N

EC number: =5.3.1.4

Molecular weight: Translated: 56123; Mature: 56123

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTKDYEFWFVTGSQHLYGEETLELVDQHAKSICEGLSGISSRYKITHKPVVTSPETIR
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
ELLREAEYSETCAGIITWMHTFSPAKMWIEGLSSYQKPLMHLHTQYNRDIPWGTIDMDFM
HHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
NSNQSAHGDREYGYINSRMGLSRKVIAGYWDDEEVKKEMSQWMDTAAALNESRHIKVARF
CCCCCCCCCCCCCEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE
GDNMRHVAVTDGDKVGAHIQFGWQVDGYGIGDLVEVMDRITDDEVDTLYAEYDRLYVISE
CCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEC
ETKRDEAKVASIKEQAKIELGLTAFLEQGGYTAFTTSFEVLHGMKQLPGLAVQRLMEKGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCC
GFAGEGDWKTAALVRMMKIMAKGKRTSFMEDYTYHFEPGNEMILGSHMLEVCPTVALDQP
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCEEEHHHHHHHCCCCCCCCC
KIEVHSLSIGGKEDPARLVFNGISGSAIQASIVDIGGRFRLVLNEVNGQEIEKDMPNLPV
CEEEEEEECCCCCCCHHEEEECCCCCCEEEEEEECCCEEEEEEECCCCHHHHHCCCCCCH
ARVLWKPEPSLKTAAEAWILAGGAHHTCLSYELTAEQMLDWAEMAGIESVLISRDTTIHK
HHEEECCCCCHHHHHHHHEEECCCCCEEEEEEECHHHHHHHHHHCCHHHHHHCCCHHHHH
LKHELKWNEALYRLQK
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQTKDYEFWFVTGSQHLYGEETLELVDQHAKSICEGLSGISSRYKITHKPVVTSPETIR
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
ELLREAEYSETCAGIITWMHTFSPAKMWIEGLSSYQKPLMHLHTQYNRDIPWGTIDMDFM
HHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
NSNQSAHGDREYGYINSRMGLSRKVIAGYWDDEEVKKEMSQWMDTAAALNESRHIKVARF
CCCCCCCCCCCCCEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE
GDNMRHVAVTDGDKVGAHIQFGWQVDGYGIGDLVEVMDRITDDEVDTLYAEYDRLYVISE
CCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEC
ETKRDEAKVASIKEQAKIELGLTAFLEQGGYTAFTTSFEVLHGMKQLPGLAVQRLMEKGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCC
GFAGEGDWKTAALVRMMKIMAKGKRTSFMEDYTYHFEPGNEMILGSHMLEVCPTVALDQP
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCEEEHHHHHHHCCCCCCCCC
KIEVHSLSIGGKEDPARLVFNGISGSAIQASIVDIGGRFRLVLNEVNGQEIEKDMPNLPV
CEEEEEEECCCCCCCHHEEEECCCCCCEEEEEEECCCEEEEEEECCCCHHHHHCCCCCCH
ARVLWKPEPSLKTAAEAWILAGGAHHTCLSYELTAEQMLDWAEMAGIESVLISRDTTIHK
HHEEECCCCCHHHHHHHHEEECCCCCEEEEEEECHHHHHHHHHHCCHHHHHHCCCHHHHH
LKHELKWNEALYRLQK
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9084180; 8969504; 9384377; 10417639