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The map label for this gene is ysnF

Identifier: 255767652

GI number: 255767652

Start: 2898931

End: 2899752

Strand: Direct

Name: ysnF

Synonym: BSU28340

Alternate gene names: 255767652

Gene position: 2898931-2899752 (Clockwise)

Preceding gene: 16079885

Following gene: 16079898

Centisome position: 68.77

GC content: 40.63

Gene sequence:

>822_bases
ATGAAAAGCATAGTTGGTGTATATGAAACTCCGCAGGAAACCATCGCAGCGATTGAAGGCTTACTTACAAAAGGCTATGA
TTCTGATGACATTTCTGTTGTGACAAGCCGGCGAGATACAGATTATTTGGAGTCACGTACAGGAACAGAAGTCAATCAAG
CTATCGATGCACATCAGGACGAATCTGAATCTTTTTTCGATAAACTGAAAGATTATTTCACAATGGATGATACTGCTACA
CACAGCAAAGCATTATCCGACTTGGATATTAAAACTGATGAAATAGACAAGTATCAAGAAGATTTGGATGACGGAAAACT
TCTGGTAGCCGTCGATACAGATGCAGATGTAATTGCTCCTATTGATAACGGCAATGCCCTTTCAGGCGGCTTTTCAAGCA
CAAATGAATTGGATTATACAACGAAAGAAGAAAAAACGATGCCGCTCCGGGAAGAACAGCTGAAGGTCGATAAGGAAGAC
GTTCAAACCGGCGAAGTAGAAATAGGAAAAGAAGTGAAAACAGAAAAAAGAGATATGGACATTCCGGTGAGACATGATGA
AATTTATGTCGAACGCCGTCCAGTGGATGAAAATAAAACGGACGCTGCTCCCGTCAACGATTCGGAAGAGATCAGAGTTC
CAATCGTTGAGGAAAAGCTGGAAGTGACTAAAAAACCGGTTGTCACTGATGAAGTGGTTGTCGGCAAACGCACTGTTGAA
GAAAATGAACATATTTCTGAAACTGTGAAAAAAGAAGAACCTCGTCTGAATAAAGAAGGAAAAGTTGACGGCTTGGATGA
TGATCCGTTAAATAACAAATGA

Upstream 100 bases:

>100_bases
GATACACGCCAATGTTTTCAATTTTGTTTAATTCAAAGAACAGCGGGAATTACAAACGACATGAACGATATCATGCAAAT
TCATAAAGGAGGAGATTGAT

Downstream 100 bases:

>100_bases
AAATCATAGACCGACAACAAAAAACCTCAAATCCTAAATGGATTTGAGGTTTTTCTTTTGGTACGTCCCAGGAGAGATTC
GAACTCCCGACCGACGGCTT

Product: stress response protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKSIVGVYETPQETIAAIEGLLTKGYDSDDISVVTSRRDTDYLESRTGTEVNQAIDAHQDESESFFDKLKDYFTMDDTAT
HSKALSDLDIKTDEIDKYQEDLDDGKLLVAVDTDADVIAPIDNGNALSGGFSSTNELDYTTKEEKTMPLREEQLKVDKED
VQTGEVEIGKEVKTEKRDMDIPVRHDEIYVERRPVDENKTDAAPVNDSEEIRVPIVEEKLEVTKKPVVTDEVVVGKRTVE
ENEHISETVKKEEPRLNKEGKVDGLDDDPLNNK

Sequences:

>Translated_273_residues
MKSIVGVYETPQETIAAIEGLLTKGYDSDDISVVTSRRDTDYLESRTGTEVNQAIDAHQDESESFFDKLKDYFTMDDTAT
HSKALSDLDIKTDEIDKYQEDLDDGKLLVAVDTDADVIAPIDNGNALSGGFSSTNELDYTTKEEKTMPLREEQLKVDKED
VQTGEVEIGKEVKTEKRDMDIPVRHDEIYVERRPVDENKTDAAPVNDSEEIRVPIVEEKLEVTKKPVVTDEVVVGKRTVE
ENEHISETVKKEEPRLNKEGKVDGLDDDPLNNK
>Mature_273_residues
MKSIVGVYETPQETIAAIEGLLTKGYDSDDISVVTSRRDTDYLESRTGTEVNQAIDAHQDESESFFDKLKDYFTMDDTAT
HSKALSDLDIKTDEIDKYQEDLDDGKLLVAVDTDADVIAPIDNGNALSGGFSSTNELDYTTKEEKTMPLREEQLKVDKED
VQTGEVEIGKEVKTEKRDMDIPVRHDEIYVERRPVDENKTDAAPVNDSEEIRVPIVEEKLEVTKKPVVTDEVVVGKRTVE
ENEHISETVKKEEPRLNKEGKVDGLDDDPLNNK

Specific function: Unknown

COG id: COG3861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YSNF_BACSU (P94560)

Other databases:

- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   G69986
- RefSeq:   NP_390712.3
- EnsemblBacteria:   EBBACT00000000943
- GeneID:   936228
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28340
- GenoList:   BSU28340
- GeneTree:   EBGT00070000033698
- ProtClustDB:   CLSK2307652
- BioCyc:   BSUB:BSU28340-MONOMER
- InterPro:   IPR011756
- InterPro:   IPR019060
- TIGRFAMs:   TIGR02271

Pfam domain/function: PF09557 DUF2382

EC number: NA

Molecular weight: Translated: 30725; Mature: 30725

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIVGVYETPQETIAAIEGLLTKGYDSDDISVVTSRRDTDYLESRTGTEVNQAIDAHQD
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHCCCCHHHHHHHCCCC
ESESFFDKLKDYFTMDDTATHSKALSDLDIKTDEIDKYQEDLDDGKLLVAVDTDADVIAP
CHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEE
IDNGNALSGGFSSTNELDYTTKEEKTMPLREEQLKVDKEDVQTGEVEIGKEVKTEKRDMD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCEEECHHHHHHHHCCC
IPVRHDEIYVERRPVDENKTDAAPVNDSEEIRVPIVEEKLEVTKKPVVTDEVVVGKRTVE
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCEECCCHHHH
ENEHISETVKKEEPRLNKEGKVDGLDDDPLNNK
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKSIVGVYETPQETIAAIEGLLTKGYDSDDISVVTSRRDTDYLESRTGTEVNQAIDAHQD
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHCCCCHHHHHHHCCCC
ESESFFDKLKDYFTMDDTATHSKALSDLDIKTDEIDKYQEDLDDGKLLVAVDTDADVIAP
CHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEE
IDNGNALSGGFSSTNELDYTTKEEKTMPLREEQLKVDKEDVQTGEVEIGKEVKTEKRDMD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCEEECHHHHHHHHCCC
IPVRHDEIYVERRPVDENKTDAAPVNDSEEIRVPIVEEKLEVTKKPVVTDEVVVGKRTVE
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCCEECCCHHHH
ENEHISETVKKEEPRLNKEGKVDGLDDDPLNNK
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 10568751; 11988534