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The map label for this gene is ysxD

Identifier: 255767647

GI number: 255767647

Start: 2879363

End: 2879860

Strand: Direct

Name: ysxD

Synonym: BSU28180

Alternate gene names: 255767647

Gene position: 2879363-2879860 (Clockwise)

Preceding gene: 255767645

Following gene: 16079884

Centisome position: 68.3

GC content: 39.96

Gene sequence:

>498_bases
ATGAAACAAAAATCAATTTTATTCCCTTGTCTGCTGCTTGCCGCTTCTGTATATGCATGGCTAGAAAGCGGCCAAGCCGA
ACTGTTTTCAGGGCAGGATCAATGGCCTGTTCTCCTCATGCTGTTAGGCGCAGCCTTTGTATATCAAGGAAAAAAAGAAG
CCGTCACACCCCATTTTTTTATCGGTTTGCTTCTCTTCGGGATCGGTTTACACTTTTTTGCCAAGCCGAAATGGGTATGG
TGGCCGGATGATTTTGAAATGCTCCTCTTTATGATCGGCTTCTCACTTCTCGTTTCAACCGTTCAAAAAAAAGAATATGT
ATATGAAGCTGTGTCGATGATTTGTTTTTCCCTGTTTTTGTACTTTTTCAAACAAATTATGGCATGGCTTGAGTCTGCGC
ATATTCCAACAGCGCTTCTGAAGGAGTATTGGCCGTTTGTCTTTATTGGAATCAGTTTATTGTTATTATTGATAAAACGA
AAAAAATCTATACGATAA

Upstream 100 bases:

>100_bases
TTAGAAAAAGCTTCAGGGAAAAGAAGCATTCCTATTGACAATACCAAAAACAGCAGAAATTTACTACACATCAGCTCTAA
AAAACAAGAAGGTGATATGC

Downstream 100 bases:

>100_bases
ATAAAACCGGTAGAGGATCCTCTACCGGTTTATCATTTTTTTGATCGCTCCCCAAGCTTCGTCTTTTCCCTTTTTCGTTT
CTGAAGAAAAGAGGATCAGC

Product: integral inner membrane protein

Products: NA

Alternate protein names: ORFY

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKQKSILFPCLLLAASVYAWLESGQAELFSGQDQWPVLLMLLGAAFVYQGKKEAVTPHFFIGLLLFGIGLHFFAKPKWVW
WPDDFEMLLFMIGFSLLVSTVQKKEYVYEAVSMICFSLFLYFFKQIMAWLESAHIPTALLKEYWPFVFIGISLLLLLIKR
KKSIR

Sequences:

>Translated_165_residues
MKQKSILFPCLLLAASVYAWLESGQAELFSGQDQWPVLLMLLGAAFVYQGKKEAVTPHFFIGLLLFGIGLHFFAKPKWVW
WPDDFEMLLFMIGFSLLVSTVQKKEYVYEAVSMICFSLFLYFFKQIMAWLESAHIPTALLKEYWPFVFIGISLLLLLIKR
KKSIR
>Mature_165_residues
MKQKSILFPCLLLAASVYAWLESGQAELFSGQDQWPVLLMLLGAAFVYQGKKEAVTPHFFIGLLLFGIGLHFFAKPKWVW
WPDDFEMLLFMIGFSLLVSTVQKKEYVYEAVSMICFSLFLYFFKQIMAWLESAHIPTALLKEYWPFVFIGISLLLLLIKR
KKSIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YSXD_BACSU (P40736)

Other databases:

- EMBL:   X76424
- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   D69987
- RefSeq:   NP_390696.2
- EnsemblBacteria:   EBBACT00000001325
- GeneID:   937352
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28180
- NMPDR:   fig|224308.1.peg.2821
- GenoList:   BSU28180
- GeneTree:   EBGT00050000002006
- HOGENOM:   HBG338210
- ProtClustDB:   CLSK2523449
- BioCyc:   BSUB:BSU28180-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19173; Mature: 19173

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x103d52a0)-; HASH(0x11751b20)-; HASH(0x11386c5c)-; HASH(0x118621a0)-; HASH(0x118f2b54)-; HASH(0x11455630)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKSILFPCLLLAASVYAWLESGQAELFSGQDQWPVLLMLLGAAFVYQGKKEAVTPHFF
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHH
IGLLLFGIGLHFFAKPKWVWWPDDFEMLLFMIGFSLLVSTVQKKEYVYEAVSMICFSLFL
HHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFFKQIMAWLESAHIPTALLKEYWPFVFIGISLLLLLIKRKKSIR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKQKSILFPCLLLAASVYAWLESGQAELFSGQDQWPVLLMLLGAAFVYQGKKEAVTPHFF
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHH
IGLLLFGIGLHFFAKPKWVWWPDDFEMLLFMIGFSLLVSTVQKKEYVYEAVSMICFSLFL
HHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFFKQIMAWLESAHIPTALLKEYWPFVFIGISLLLLLIKRKKSIR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961402; 8969504; 9384377