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The map label for this gene is yqfD

Identifier: 255767582

GI number: 255767582

Start: 2615452

End: 2616648

Strand: Reverse

Name: yqfD

Synonym: BSU25350

Alternate gene names: 255767582

Gene position: 2616648-2615452 (Counterclockwise)

Preceding gene: 16079590

Following gene: 255767581

Centisome position: 62.07

GC content: 40.85

Gene sequence:

>1197_bases
GTGAAAAATAAATGGCTGTCTTTTTTTTCGGGTAAGGTCCAGCTTGAATTGACGGGAAGAGGGATTGAGCGGCTCCTTAA
TGAATGCACAAGACAGGGGATTCCGGTCTTTCATGTCAAAAAAAAGAAAGAAGCCGTATCGTTATATATACAGCTTCAGG
ATGTACATGCCTTTCGGCGGGTAAGAAGTAAATTTAAATGTAAAGCCCGATTTATCAATCGGAAGGGATTTCCCTTCCTG
TTGCTGAAATCAAAGCTGAATATAGGGTTTACGATCGGTTTTGCGATTTTTTTCATTCTTTTGTTTTTGCTGTCCAATAT
GGTGTGGAAAATTGATGTGACAGGCGCTAAGCCTGAAACAGAACATCAAATGAGGCAGCATCTTAATGAAATCGGCGTCA
AAAAGGGCCGTCTGCAGTTTTTAATGATGTCGCCCGAAAAAATACAGAAATCATTAACCAATGGAATAGACAATATCACT
TGGGTCGGAGTTGATCTGAAGGGGACGACCATTCATATGAAAGTTGTGGAGAAAAATGAGCCCGAAAAAGAAAAATATGT
TAGCCCGCGCAATATTGTCGCCAAAAAGAAAGCAACCATTACGAGAATGTTTGTGCAAAAAGGACAGCCCATGGCCGCCA
TACACGATCATGTTGAAAAGGGACAGCTGCTTGTTTCGGGACTGATCGGCAGCGAAGACCATCAGCAGGAAGTCGCCTCA
AAAGCAGAAATTTATGGAGAAACCTGGTATAGATCAGAAGTGACAGTCCCGCTTGAAACATTATTTAACGTCTATACGGG
CAAAGTAAGGACAAAGCACAAGCTTTCTTTTGGTTCTTTGGCAATCCCGATCTGGGGGATGACGTTTAAAAAAGAGGAAT
TGAAGCATCCAAAAACAGAACAAGAAAAGCATTCGCTTCATTTTCTCGGATTTAAGCTCCCTGTATCCTATGTCAAAGAG
CAAACGAGAGAAAGTGAAGAGGCTTTGCGAAAATATACAAAAGAAGAAGCAGTTCAAGAAGGCATTAAATTGGGTAAACA
GGATGTAGAGGATAAAATAGGCGAAAACGGCGAGGTGAAAAGTGAAAAAGTTTTGCACCAGACTGTTGAGAATGGTAAAG
TAAAGTTGATTATTCTCTACCAAGTTATAGAAGATATCGTTCAAACCACACCTATTGTCAGGGAGACTGAAGAATGA

Upstream 100 bases:

>100_bases
AAATTTTGTCATCAAGGCGATTCTTCCGGAAGAGATACTTTTGGAGGGTACGATTGATGTCGTTCGATATGTTGAGTCAT
AAAGCCGAGGGGGAAATGTT

Downstream 100 bases:

>100_bases
CAGAACATTTACTTGCGATGAATCAAAAACTGAAAAACCCGGACGAGGCGCTTTCACTCTTCGGGAACCAAGATTCTTTT
TTGAAATTGATGGAGAAAGA

Product: stage IV sporulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYIQLQDVHAFRRVRSKFKCKARFINRKGFPFL
LLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGAKPETEHQMRQHLNEIGVKKGRLQFLMMSPEKIQKSLTNGIDNIT
WVGVDLKGTTIHMKVVEKNEPEKEKYVSPRNIVAKKKATITRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVAS
KAEIYGETWYRSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTEQEKHSLHFLGFKLPVSYVKE
QTRESEEALRKYTKEEAVQEGIKLGKQDVEDKIGENGEVKSEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE

Sequences:

>Translated_398_residues
MKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYIQLQDVHAFRRVRSKFKCKARFINRKGFPFL
LLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGAKPETEHQMRQHLNEIGVKKGRLQFLMMSPEKIQKSLTNGIDNIT
WVGVDLKGTTIHMKVVEKNEPEKEKYVSPRNIVAKKKATITRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVAS
KAEIYGETWYRSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTEQEKHSLHFLGFKLPVSYVKE
QTRESEEALRKYTKEEAVQEGIKLGKQDVEDKIGENGEVKSEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE
>Mature_398_residues
MKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYIQLQDVHAFRRVRSKFKCKARFINRKGFPFL
LLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGAKPETEHQMRQHLNEIGVKKGRLQFLMMSPEKIQKSLTNGIDNIT
WVGVDLKGTTIHMKVVEKNEPEKEKYVSPRNIVAKKKATITRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVAS
KAEIYGETWYRSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTEQEKHSLHFLGFKLPVSYVKE
QTRESEEALRKYTKEEAVQEGIKLGKQDVEDKIGENGEVKSEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.megaterium spoIV

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQFD_BACSU (P54469)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   D69953
- RefSeq:   NP_390413.2
- EnsemblBacteria:   EBBACT00000001454
- GeneID:   937867
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25350
- NMPDR:   fig|224308.1.peg.2538
- GenoList:   BSU25350
- GeneTree:   EBGT00050000001618
- HOGENOM:   HBG314152
- ProtClustDB:   CLSK873001
- BioCyc:   BSUB:BSU25350-MONOMER
- InterPro:   IPR010690
- TIGRFAMs:   TIGR02876

Pfam domain/function: PF06898 YqfD

EC number: NA

Molecular weight: Translated: 45816; Mature: 45816

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x109a52c0)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYIQLQDVHAFRR
CCCCCEEEECCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEHHHHHHHH
VRSKFKCKARFINRKGFPFLLLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGAKPET
HHHHHHHHHHHHCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCH
EHQMRQHLNEIGVKKGRLQFLMMSPEKIQKSLTNGIDNITWVGVDLKGTTIHMKVVEKNE
HHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCC
PEKEKYVSPRNIVAKKKATITRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVAS
CHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
KAEIYGETWYRSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTE
HHHHHCCCEECCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEECCEECHHHHCCCCCC
QEKHSLHFLGFKLPVSYVKEQTRESEEALRKYTKEEAVQEGIKLGKQDVEDKIGENGEVK
HHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCH
SEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE
HHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCH
>Mature Secondary Structure
MKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYIQLQDVHAFRR
CCCCCEEEECCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEHHHHHHHH
VRSKFKCKARFINRKGFPFLLLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGAKPET
HHHHHHHHHHHHCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCH
EHQMRQHLNEIGVKKGRLQFLMMSPEKIQKSLTNGIDNITWVGVDLKGTTIHMKVVEKNE
HHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCC
PEKEKYVSPRNIVAKKKATITRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVAS
CHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
KAEIYGETWYRSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTE
HHHHHCCCEECCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEECCEECHHHHCCCCCC
QEKHSLHFLGFKLPVSYVKEQTRESEEALRKYTKEEAVQEGIKLGKQDVEDKIGENGEVK
HHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCH
SEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE
HHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377