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The map label for this gene is yqfG

Identifier: 255767580

GI number: 255767580

Start: 2611808

End: 2612281

Strand: Reverse

Name: yqfG

Synonym: BSU25320

Alternate gene names: 255767580

Gene position: 2612281-2611808 (Counterclockwise)

Preceding gene: 16079587

Following gene: 255767579

Centisome position: 61.97

GC content: 43.46

Gene sequence:

>474_bases
ATGAGTTTACTGATTGATATCGTTGATGAAACGGGAAGCGTCTCAGAAGAGATGCTCAAAGAAGTAGAAAATCTGCTTCA
ATTTGCCGCTGAGCGTGAAGGCGTTCAGGATCAGGCTGAAGTTTCTGTCACGATTGTTTCCAATGATGACATACATCAGA
TTAACAAAGAATACCGGGGAAAGGATGCTCCGACAGATGTCATCTCATTTGCTCTTGAAGAAGAGGGAGAAGGCGAGATC
GAAATCGTGGGCGCCGAAATGCCTCCGGTTTTAGGTGATATTATCATCAGTGCCGATCGCACAAGAGAGCAGGCAGAGGA
GTATAATCATTCTTTTAAAAGAGAGCTCGGATTTCTAGCTGTACACGGATTTCTGCACCTTTTAGGATATGACCATATGA
CGAAAGAGGAAGAAGAGGAGATGTTTACTAAGCAAAAGGAATTGCTGGACGCTTATGGACTCAAAAGATCATAG

Upstream 100 bases:

>100_bases
TAAAGAGCTGGATACAATCGCAAAAACGCTCTGTGCAACATTAAAAGGAATTTTCCACTCCCGGATTGAATATCCGGAGG
CTACTAAGAAGGTGAAATAG

Downstream 100 bases:

>100_bases
AAATGAGCTGAATCGATTCTTCAAAAGCTTCGTGCATGCAGGCCGGGGCATATGGGAAACAGCGCGGACGGAGCGGAATT
TCCAATTTCATGCCGCAGCC

Product: metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSLLIDIVDETGSVSEEMLKEVENLLQFAAEREGVQDQAEVSVTIVSNDDIHQINKEYRGKDAPTDVISFALEEEGEGEI
EIVGAEMPPVLGDIIISADRTREQAEEYNHSFKRELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLKRS

Sequences:

>Translated_157_residues
MSLLIDIVDETGSVSEEMLKEVENLLQFAAEREGVQDQAEVSVTIVSNDDIHQINKEYRGKDAPTDVISFALEEEGEGEI
EIVGAEMPPVLGDIIISADRTREQAEEYNHSFKRELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLKRS
>Mature_156_residues
SLLIDIVDETGSVSEEMLKEVENLLQFAAEREGVQDQAEVSVTIVSNDDIHQINKEYRGKDAPTDVISFALEEEGEGEIE
IVGAEMPPVLGDIIISADRTREQAEEYNHSFKRELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLKRS

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family

Homologues:

Organism=Homo sapiens, GI54607072, Length=124, Percent_Identity=35.4838709677419, Blast_Score=73, Evalue=9e-14,
Organism=Escherichia coli, GI1786880, Length=118, Percent_Identity=37.2881355932203, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRMF_BACSU (P46347)

Other databases:

- EMBL:   D84432
- EMBL:   U29177
- EMBL:   AL009126
- PIR:   F69953
- RefSeq:   NP_390410.2
- ProteinModelPortal:   P46347
- SMR:   P46347
- EnsemblBacteria:   EBBACT00000003545
- GeneID:   937869
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25320
- NMPDR:   fig|224308.1.peg.2535
- GenoList:   BSU25320
- GeneTree:   EBGT00050000002084
- HOGENOM:   HBG734136
- PhylomeDB:   P46347
- ProtClustDB:   PRK00016
- BioCyc:   BSUB:BSU25320-MONOMER
- HAMAP:   MF_00009
- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036
- Gene3D:   G3DSA:3.40.390.30
- TIGRFAMs:   TIGR00043

Pfam domain/function: PF02130 UPF0054

EC number: NA

Molecular weight: Translated: 17759; Mature: 17628

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLIDIVDETGSVSEEMLKEVENLLQFAAEREGVQDQAEVSVTIVSNDDIHQINKEYRG
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCC
KDAPTDVISFALEEEGEGEIEIVGAEMPPVLGDIIISADRTREQAEEYNHSFKRELGFLA
CCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLKRS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLLIDIVDETGSVSEEMLKEVENLLQFAAEREGVQDQAEVSVTIVSNDDIHQINKEYRG
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCC
KDAPTDVISFALEEEGEGEIEIVGAEMPPVLGDIIISADRTREQAEEYNHSFKRELGFLA
CCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLKRS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377