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The map label for this gene is yqjF

Identifier: 255767519

GI number: 255767519

Start: 2484911

End: 2485639

Strand: Direct

Name: yqjF

Synonym: BSU23900

Alternate gene names: 255767519

Gene position: 2484911-2485639 (Clockwise)

Preceding gene: 16079445

Following gene: 255767524

Centisome position: 58.95

GC content: 46.09

Gene sequence:

>729_bases
TTGACGGAACGCTTTCAGCAAAAAAATATTTCTGTACCTGATGGAATCTGGATCATGAGACAAACCTGGAATGATGTCTT
ATTTGCTCACTGGCCTGTTGATGTTTCTATCCTTCGCGCTTTGGTACCGTCCGTTTTAGAATTAGATACATATAACGGGC
AAGCTTGGATCAGCATGCTTCCCTTTATGCTCACGAACCTGAGGGCGCGTTATCTCCCTGTCATTCCCGGTGCGCGTGCA
TTTCCTGAGCTTAACCTCCGCACCTATGTCACGTATAAAGGCAAGCCCGGCATTTATTTTTTTAGCTTAGATGCCGATCA
TCGTCTGGCGGTCCTTGGCGCTCGCACATTCTTTCATCTGCCTTATTTTTACGCGGATATGAAGTCCGAAAAAAACGGTG
ATGCCATTGACTATGTCAGCAAGCGGAAAAATGACAAAGAAGCAGCATTCCACGCCGCATACCGGCCAATTTCAGCGCCT
TTTACAGCAGAAAAGGATTCGCTCGATTACTGGCTGACAGAACGATACAGGCTCTACACCACTTATCGCAATAAGCTCTA
TTACGAAGACATCCATCATCATCCGTGGCTGCTGCAAAACGCCGAAGCAGAAATTTCAGTCAATACGGTGACTGATGCTC
ACGGTATTACATTGCCGGAGTCAGACCCCTTGCTTCATTATGCTAAAAAACAGGATGTGTTATTTTGGCCGCTTAGGAAA
TGGAGCTAA

Upstream 100 bases:

>100_bases
GCTGAAGCAGAAATGGCCATCCTAAAAAATAGCCGTATCGTTTAAAAAGAAGGAAATCGGGAATACCTTTACTCACCTCC
AACCGAAAGGAGCCTATACG

Downstream 100 bases:

>100_bases
AAAAACCCGATGCGGGAAATCGCACTCGGGTTTTCTTTTTTTATTTTGCCGCCTCTTCAATAATGGCAACAACCATTTCT
GCCGTTTTAACGAGCTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTERFQQKNISVPDGIWIMRQTWNDVLFAHWPVDVSILRALVPSVLELDTYNGQAWISMLPFMLTNLRARYLPVIPGARA
FPELNLRTYVTYKGKPGIYFFSLDADHRLAVLGARTFFHLPYFYADMKSEKNGDAIDYVSKRKNDKEAAFHAAYRPISAP
FTAEKDSLDYWLTERYRLYTTYRNKLYYEDIHHHPWLLQNAEAEISVNTVTDAHGITLPESDPLLHYAKKQDVLFWPLRK
WS

Sequences:

>Translated_242_residues
MTERFQQKNISVPDGIWIMRQTWNDVLFAHWPVDVSILRALVPSVLELDTYNGQAWISMLPFMLTNLRARYLPVIPGARA
FPELNLRTYVTYKGKPGIYFFSLDADHRLAVLGARTFFHLPYFYADMKSEKNGDAIDYVSKRKNDKEAAFHAAYRPISAP
FTAEKDSLDYWLTERYRLYTTYRNKLYYEDIHHHPWLLQNAEAEISVNTVTDAHGITLPESDPLLHYAKKQDVLFWPLRK
WS
>Mature_241_residues
TERFQQKNISVPDGIWIMRQTWNDVLFAHWPVDVSILRALVPSVLELDTYNGQAWISMLPFMLTNLRARYLPVIPGARAF
PELNLRTYVTYKGKPGIYFFSLDADHRLAVLGARTFFHLPYFYADMKSEKNGDAIDYVSKRKNDKEAAFHAAYRPISAPF
TAEKDSLDYWLTERYRLYTTYRNKLYYEDIHHHPWLLQNAEAEISVNTVTDAHGITLPESDPLLHYAKKQDVLFWPLRKW
S

Specific function: Unknown

COG id: COG3361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJF_BACSU (P54543)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   F69963
- RefSeq:   NP_390270.3
- ProteinModelPortal:   P54543
- EnsemblBacteria:   EBBACT00000002281
- GeneID:   938688
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23900
- GenoList:   BSU23900
- GeneTree:   EBGT00050000006099
- HOGENOM:   HBG529971
- ProtClustDB:   CLSK739561
- BioCyc:   BSUB:BSU23900-MONOMER
- InterPro:   IPR018644

Pfam domain/function: PF09844 DUF2071

EC number: NA

Molecular weight: Translated: 28411; Mature: 28280

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERFQQKNISVPDGIWIMRQTWNDVLFAHWPVDVSILRALVPSVLELDTYNGQAWISML
CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHEECCCCCHHHHHHH
PFMLTNLRARYLPVIPGARAFPELNLRTYVTYKGKPGIYFFSLDADHRLAVLGARTFFHL
HHHHHHCCHHEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEECHHHHHC
PYFYADMKSEKNGDAIDYVSKRKNDKEAAFHAAYRPISAPFTAEKDSLDYWLTERYRLYT
HHHEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEE
TYRNKLYYEDIHHHPWLLQNAEAEISVNTVTDAHGITLPESDPLLHYAKKQDVLFWPLRK
EECCEEEEHHHCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCC
WS
CC
>Mature Secondary Structure 
TERFQQKNISVPDGIWIMRQTWNDVLFAHWPVDVSILRALVPSVLELDTYNGQAWISML
CCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHEECCCCCHHHHHHH
PFMLTNLRARYLPVIPGARAFPELNLRTYVTYKGKPGIYFFSLDADHRLAVLGARTFFHL
HHHHHHCCHHEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEECHHHHHC
PYFYADMKSEKNGDAIDYVSKRKNDKEAAFHAAYRPISAPFTAEKDSLDYWLTERYRLYT
HHHEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEE
TYRNKLYYEDIHHHPWLLQNAEAEISVNTVTDAHGITLPESDPLLHYAKKQDVLFWPLRK
EECCEEEEHHHCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCC
WS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 10568751