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The map label for this gene is yqjN

Identifier: 255767516

GI number: 255767516

Start: 2474028

End: 2475671

Strand: Reverse

Name: yqjN

Synonym: BSU23810

Alternate gene names: 255767516

Gene position: 2475671-2474028 (Counterclockwise)

Preceding gene: 16079441

Following gene: 16079436

Centisome position: 58.73

GC content: 45.38

Gene sequence:

>1644_bases
ATGAATTGGCAGACGAAGGACGAATTGCTGGCACTTTTAACTTCTCTTGTGCAATACGAAAGCATCACCGGTTCAAAGGG
CGAGGTAGCGCTTGCAGAGTATCTTTATTTTATTTTGAAGGACAAGCCCTATTTTCAAAAGCACCCTGATGATGTAACAC
TTCATCCGATGGACGATGGCAGATCTTTTCTTACGGCTCTAGTCAAAAAGAAGAATGTCAAAAAGACAGTGCTTCTGCTG
AGTCATTTTGATGTCGTTGACATAGAAGATTACGGCGAATTTAAACATATGGCTTGCAAGCCTGCTGAGCTTTTGAGCTC
CTTTTTAGAGAAAAAAGAGCTGCTCCCGGAACGTGTGAGAAGAGATGCCGAAAGCGGAGACTGGCTGTTCGGAAGAGGGA
CGATGGATATGAAAGCGGGGCTTTGTATTCAACTGTCGATGCTGGAGAGGGCAATGAACGGGCATTTTGAGGGCAATCTG
CTGTTGATAACGGTTCCGGACGAGGAAGTGAATTCAAGAGGCATGATTGAAGCGGTTCCTGCATTGAAGGAGATGGAGAA
AAAGCATGATATCACATTAACCGCTTGCCTGAATGCCGAACCGATGTTTGAAAAATTTCCCGGCGATCAGCAGCAATATT
TTTATACAGGAAGCATTGGCAAGGTGCTTGCGGGTTTTTTCTGCAAGGGGATTGAGACACATGTTGGAGAGCCGTTTTCA
GGTCTAAACGCAAATTTAATGGTATCTGAGATTAACCGTTTGCTTGAACTGAATGCTGATTATTGCGAAAAGGTTGATGG
CGAGGTCACTCCGCCGCCGGTAAACTTAATGCAAAAGGACTTGAAAGAGGCATATTCAGTCCAGACACCGCATACAGCCG
TCACATTATTTAATGTGCTGTCAATGAAACGCTCAGCTAGTGAGCTGCATCAGATGCTGCTTAAAACAGCAGAACAGGCG
GCGGAGGAAATCATGTCGAACGTTCGGAAGAAAACACAGGATTTTCAACAATTTGAGCCATTTCAGCCGATTGAGCGGGA
CGTCACTGTTTTGACATTTGATGAGCTGGTCTCGCGTGCAAAAAAGCGTGCGGGGATCTCGGAAACAGAGCGGGCTCTAA
ATTATGCCTTTGCTAACAGGGGGGAGCTTGGAGACAGGGATTTTTCGACGAAAATTGTTTCTGAGCTTGCTTCGCTTTGT
AAGGAGGATGCGCCGCTCATCGTTCTGTTTTATAGTCCGCCGCTTTATCCAGCTGTTTCTTCAAAGGATGATCAATTGAT
CAGAAATACAGCAGATCAGATAAAGCATTATGCGGCTGAGCGATACGGCATTGCATTACGGGAGGTTCAGTACTTCCCCG
GACTTTCGGACTTGAGTTATCTTCAGCTGGAAAAACAGGAGGTTGATGCATACACAAGCAATATGCCGCTCTTTAACAGA
GGGTATTCATTGCCAAGCGGTAAAAATCAGGCTTTATATGTCCCAGTTTTAAATGTCGGTCCGGCTGGTAAAGACCCGCA
TAAATGGACGGAAAGATTGTATATGCCTTATTCCTTTGAAGTGCTTCCCGATTTGCTTTCATTTACGATCTCCGCGCTAT
TAAAGCAATCAGAATCTGCCGGCCAGCTGCTGCGGGAAAAATAA

Upstream 100 bases:

>100_bases
TCAAATGAACCGCTTTTGTCAAACATTTCTGTATAATAGACGAGAAATCAGTTTATTTTTCAGTATAGAAGCATTTTTAT
TCATAGGAGGGGCGGAATCA

Downstream 100 bases:

>100_bases
AAAACAGAAGGCACTGTGCCTTCTGTTTTTGTCCTTACATCTAAGAATGTCTCTCTAAGGCGGCACCGGCAAACTGTTCT
TTGATTTCTGCGCTCCGTTT

Product: N-deacylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MNWQTKDELLALLTSLVQYESITGSKGEVALAEYLYFILKDKPYFQKHPDDVTLHPMDDGRSFLTALVKKKNVKKTVLLL
SHFDVVDIEDYGEFKHMACKPAELLSSFLEKKELLPERVRRDAESGDWLFGRGTMDMKAGLCIQLSMLERAMNGHFEGNL
LLITVPDEEVNSRGMIEAVPALKEMEKKHDITLTACLNAEPMFEKFPGDQQQYFYTGSIGKVLAGFFCKGIETHVGEPFS
GLNANLMVSEINRLLELNADYCEKVDGEVTPPPVNLMQKDLKEAYSVQTPHTAVTLFNVLSMKRSASELHQMLLKTAEQA
AEEIMSNVRKKTQDFQQFEPFQPIERDVTVLTFDELVSRAKKRAGISETERALNYAFANRGELGDRDFSTKIVSELASLC
KEDAPLIVLFYSPPLYPAVSSKDDQLIRNTADQIKHYAAERYGIALREVQYFPGLSDLSYLQLEKQEVDAYTSNMPLFNR
GYSLPSGKNQALYVPVLNVGPAGKDPHKWTERLYMPYSFEVLPDLLSFTISALLKQSESAGQLLREK

Sequences:

>Translated_547_residues
MNWQTKDELLALLTSLVQYESITGSKGEVALAEYLYFILKDKPYFQKHPDDVTLHPMDDGRSFLTALVKKKNVKKTVLLL
SHFDVVDIEDYGEFKHMACKPAELLSSFLEKKELLPERVRRDAESGDWLFGRGTMDMKAGLCIQLSMLERAMNGHFEGNL
LLITVPDEEVNSRGMIEAVPALKEMEKKHDITLTACLNAEPMFEKFPGDQQQYFYTGSIGKVLAGFFCKGIETHVGEPFS
GLNANLMVSEINRLLELNADYCEKVDGEVTPPPVNLMQKDLKEAYSVQTPHTAVTLFNVLSMKRSASELHQMLLKTAEQA
AEEIMSNVRKKTQDFQQFEPFQPIERDVTVLTFDELVSRAKKRAGISETERALNYAFANRGELGDRDFSTKIVSELASLC
KEDAPLIVLFYSPPLYPAVSSKDDQLIRNTADQIKHYAAERYGIALREVQYFPGLSDLSYLQLEKQEVDAYTSNMPLFNR
GYSLPSGKNQALYVPVLNVGPAGKDPHKWTERLYMPYSFEVLPDLLSFTISALLKQSESAGQLLREK
>Mature_547_residues
MNWQTKDELLALLTSLVQYESITGSKGEVALAEYLYFILKDKPYFQKHPDDVTLHPMDDGRSFLTALVKKKNVKKTVLLL
SHFDVVDIEDYGEFKHMACKPAELLSSFLEKKELLPERVRRDAESGDWLFGRGTMDMKAGLCIQLSMLERAMNGHFEGNL
LLITVPDEEVNSRGMIEAVPALKEMEKKHDITLTACLNAEPMFEKFPGDQQQYFYTGSIGKVLAGFFCKGIETHVGEPFS
GLNANLMVSEINRLLELNADYCEKVDGEVTPPPVNLMQKDLKEAYSVQTPHTAVTLFNVLSMKRSASELHQMLLKTAEQA
AEEIMSNVRKKTQDFQQFEPFQPIERDVTVLTFDELVSRAKKRAGISETERALNYAFANRGELGDRDFSTKIVSELASLC
KEDAPLIVLFYSPPLYPAVSSKDDQLIRNTADQIKHYAAERYGIALREVQYFPGLSDLSYLQLEKQEVDAYTSNMPLFNR
GYSLPSGKNQALYVPVLNVGPAGKDPHKWTERLYMPYSFEVLPDLLSFTISALLKQSESAGQLLREK

Specific function: Unknown

COG id: COG4187

COG function: function code E; Arginine degradation protein (predicted deacylase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis rocB

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJN_BACSU (P54551)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   F69964
- RefSeq:   NP_390262.2
- ProteinModelPortal:   P54551
- EnsemblBacteria:   EBBACT00000003375
- GeneID:   938696
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23810
- NMPDR:   fig|224308.1.peg.2386
- GenoList:   BSU23810
- GeneTree:   EBGT00050000002515
- HOGENOM:   HBG697538
- ProtClustDB:   CLSK880974
- BioCyc:   BSUB:BSU23810-MONOMER
- InterPro:   IPR002933
- InterPro:   IPR012166
- PIRSF:   PIRSF010386

Pfam domain/function: PF01546 Peptidase_M20

EC number: NA

Molecular weight: Translated: 61855; Mature: 61855

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWQTKDELLALLTSLVQYESITGSKGEVALAEYLYFILKDKPYFQKHPDDVTLHPMDDG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEECCCC
RSFLTALVKKKNVKKTVLLLSHFDVVDIEDYGEFKHMACKPAELLSSFLEKKELLPERVR
HHHHHHHHHHCCCHHHHHHHHCCCEEECHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
RDAESGDWLFGRGTMDMKAGLCIQLSMLERAMNGHFEGNLLLITVPDEEVNSRGMIEAVP
CCCCCCCEEEECCCCCCCCCHHEEHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHH
ALKEMEKKHDITLTACLNAEPMFEKFPGDQQQYFYTGSIGKVLAGFFCKGIETHVGEPFS
HHHHHHHHCCEEEEEECCCCHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCC
GLNANLMVSEINRLLELNADYCEKVDGEVTPPPVNLMQKDLKEAYSVQTPHTAVTLFNVL
CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
SMKRSASELHQMLLKTAEQAAEEIMSNVRKKTQDFQQFEPFQPIERDVTVLTFDELVSRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEHHHHHHHH
KKRAGISETERALNYAFANRGELGDRDFSTKIVSELASLCKEDAPLIVLFYSPPLYPAVS
HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
SKDDQLIRNTADQIKHYAAERYGIALREVQYFPGLSDLSYLQLEKQEVDAYTSNMPLFNR
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
GYSLPSGKNQALYVPVLNVGPAGKDPHKWTERLYMPYSFEVLPDLLSFTISALLKQSESA
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH
GQLLREK
HHHHHCC
>Mature Secondary Structure
MNWQTKDELLALLTSLVQYESITGSKGEVALAEYLYFILKDKPYFQKHPDDVTLHPMDDG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEECCCC
RSFLTALVKKKNVKKTVLLLSHFDVVDIEDYGEFKHMACKPAELLSSFLEKKELLPERVR
HHHHHHHHHHCCCHHHHHHHHCCCEEECHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
RDAESGDWLFGRGTMDMKAGLCIQLSMLERAMNGHFEGNLLLITVPDEEVNSRGMIEAVP
CCCCCCCEEEECCCCCCCCCHHEEHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHH
ALKEMEKKHDITLTACLNAEPMFEKFPGDQQQYFYTGSIGKVLAGFFCKGIETHVGEPFS
HHHHHHHHCCEEEEEECCCCHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCC
GLNANLMVSEINRLLELNADYCEKVDGEVTPPPVNLMQKDLKEAYSVQTPHTAVTLFNVL
CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
SMKRSASELHQMLLKTAEQAAEEIMSNVRKKTQDFQQFEPFQPIERDVTVLTFDELVSRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEHHHHHHHH
KKRAGISETERALNYAFANRGELGDRDFSTKIVSELASLCKEDAPLIVLFYSPPLYPAVS
HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
SKDDQLIRNTADQIKHYAAERYGIALREVQYFPGLSDLSYLQLEKQEVDAYTSNMPLFNR
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
GYSLPSGKNQALYVPVLNVGPAGKDPHKWTERLYMPYSFEVLPDLLSFTISALLKQSESA
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH
GQLLREK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377