Click here to switch to the map view.

The map label for this gene is yokU

Identifier: 255767462

GI number: 255767462

Start: 2139179

End: 2139457

Strand: Reverse

Name: yokU

Synonym: BSU19689

Alternate gene names: 255767462

Gene position: 2139457-2139179 (Counterclockwise)

Preceding gene: 16079027

Following gene: 16079026

Centisome position: 50.75

GC content: 47.31

Gene sequence:

>279_bases
ATGAAAACATGCGAATGGTGCGGCGAGCTCGAAGCGGTGCCCGGCAGGAACACGGTGTACTGGGAGCTCCCTGATGGAAC
GAGGGCTATAGAACTGACAGACACCCCTGCCATGGTATGTTCTTCCTGCGGTATGACCTATCAAGAGGAAAACACGGTTA
AAGAGATTGAGGATCAGCTGCTTTTAATTCAAACAAAAAAACTGCCTGAAAGCCTGACATATCAGCAGCTCATGGAGACA
GAAAGAATTTTGAAACGCAACTATTTTGACTTCTCCTGA

Upstream 100 bases:

>100_bases
CATTAAAAGATCGGCGTGAGAAAAGAGATCAGCTCAAAGAAAAGAAATTTTTGGCGCAGCAGAAAAAACAGAAAGAGACT
GAATGCGGAGGGGATTCTTC

Downstream 100 bases:

>100_bases
GTCATGTTTCAGTATTCTTTTGTTGTAATTTTACACTTGAACTGTATAATAGAACAACAAAAGACAGACATCAGGAGGGG
AAACCCATGAAATCCTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKTCEWCGELEAVPGRNTVYWELPDGTRAIELTDTPAMVCSSCGMTYQEENTVKEIEDQLLLIQTKKLPESLTYQQLMET
ERILKRNYFDFS

Sequences:

>Translated_92_residues
MKTCEWCGELEAVPGRNTVYWELPDGTRAIELTDTPAMVCSSCGMTYQEENTVKEIEDQLLLIQTKKLPESLTYQQLMET
ERILKRNYFDFS
>Mature_92_residues
MKTCEWCGELEAVPGRNTVYWELPDGTRAIELTDTPAMVCSSCGMTYQEENTVKEIEDQLLLIQTKKLPESLTYQQLMET
ERILKRNYFDFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOKU_BACSU (C0H434)

Other databases:

- EMBL:   AF006665
- EMBL:   AL009126
- RefSeq:   YP_003097745.1
- EnsemblBacteria:   EBBACT00000082804
- GeneID:   8303010
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19689
- GenoList:   BSU19689
- GeneTree:   EBGT00050000002854
- ProtClustDB:   CLSK873265
- BioCyc:   BSUB:BSU19689-MONOMER
- InterPro:   IPR022451
- InterPro:   IPR022453
- TIGRFAMs:   TIGR03831
- TIGRFAMs:   TIGR03829

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10703; Mature: 10703

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTCEWCGELEAVPGRNTVYWELPDGTRAIELTDTPAMVCSSCGMTYQEENTVKEIEDQL
CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHE
LLIQTKKLPESLTYQQLMETERILKRNYFDFS
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTCEWCGELEAVPGRNTVYWELPDGTRAIELTDTPAMVCSSCGMTYQEENTVKEIEDQL
CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHE
LLIQTKKLPESLTYQQLMETERILKRNYFDFS
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377