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The map label for this gene is yoaH

Identifier: 255767438

GI number: 255767438

Start: 2029429

End: 2031114

Strand: Reverse

Name: yoaH

Synonym: BSU18610

Alternate gene names: 255767438

Gene position: 2031114-2029429 (Counterclockwise)

Preceding gene: 16078923

Following gene: 16078920

Centisome position: 48.18

GC content: 39.86

Gene sequence:

>1686_bases
ATGAAAGTGAAAACAAAATTGCTGGGGATTATATCAATATTAGTTGTTTCAATTATTGGAATTGGAGGCTCCTCAGTATT
TATGATTTCTTCTACTGTGAAAAAGAATGAAGAACTTAAAGACAAAATGGAATTCCAAAAAGAGATAAAACACATCCAAT
ATGAATTGACCGGGTTATCAAATGATGAAAGAGGCTTCTTGATTACCAGAGACAAAGAATACGACGAGGGTATGAAGGGA
AAAGCAGACGATGTCTTAAAGAGCCTTGACCGGGTTAATGACTTGATTGATGAAGAGAAGTATCAATCCAATATTGAAGA
CATTAAGACAAGTTTTACTCAGTATAGAGCTTTGAATCAGCAAGTAGTAACAGCCTACTCTTCAAATCCTAAAAAAGCAG
AAACCATCCATTTTGGAGAAGAAAGAACAATAAGAAAAGAAGGCGTAGCTCCGGCTGTCAATAAGCTGTCTGATCGCCTG
GATCAAGAGGTAGAGGATCTAAAGGATGAAATACAGGGCAATGGGAAAATGAGTCAATCGCTCATTATCATTGTCACAGG
GATATCAGTAATATTAGGCATTGTTCTAAGCATAATGCTGTTAAAGTCCATTATGGTGCCACTAAGAAGCATAAATAAGC
AGCTGGAGGAAATTGCACACGGCGAGGCTGATTTAACCAAAAAAGTCATTGTGAAAAATAAAGATGAATTTGGCCAGCTT
GCCCAATCTTTTAATTCTTTTACTCATTCATTAACTCAAATTGTGAAGCAGATCAGCAGCTCATCTGAACAAGTCGCCGC
TTCCTCTGAAGAATTATCGGCAAGCGCGGAAGAATCGAAATCAACATCTGAACATATTTCACGAGCCATGCAGATGGCTG
CCGACAGCAATGTGAAGCAAAGCTCAATGACAGAAAAGAGCGCAGAATCCATCACTGAATTATTAGACAGTATATCATCA
GTCGCTTCAAATACAGGGAACATAGCGGATCTTTCTTCTTCGATGAGAGACAAGGCTGAAATAGGCTCTAAGTCCGTCAA
CAAGATGTTAGACCAGATGAAATTCATTGATAAATCTGTAGATTCAGCCGGCAATGGATTGCAAACATTGGTAGCGAGCA
CAGCAGAAATCAGCGATATCTCTTCGCTTATCACGACGATTTCAGAGCAGACAAATTTGTTGGCACTAAATGCAGCGATC
GAGGCGGCCAGAGCCGGAGAGCAAGGAAAAGGATTTGCTGTGGTGGCAGAAGAAGTTCGGAAGTTGGCGGATGAAACAAA
TAAATCTGCAAACCACATCCAATCGGTGGTAGCGACCATCCAAAACGAATCGATAGAAACGGTAAATAATATTAAAGTTG
TTCAAGAAAATGTGAGCTCAGGTATTGTTCTTTCTCAAGAGACAACAGGAAATTTCAATGAAATACTGAACCTGGTGGAA
CAGGTCACTTCTCAAATACAAGAAGTTGCAGCAGCAACTCAACAGCTTACTTCAGGCGTTGAAGTGATTCAGCACACAGT
TCATACATTGGCTGCTGGTACAAAAGAAACGTCAGCAAATACAGAAGCGGTTGCAAATTCATCACAGGAACAGCTTCATT
CAATGGGGGAAATCTCCTATGCCGCAGAATCTCTATCTCAGTTGGCAGAAGAACTTCAAACCGTCATTAATCGTTTTAAA
TATTAA

Upstream 100 bases:

>100_bases
GTGTCGATATTATGGACATGAGCGTAAGCGAATTGGATTCAAACGCGCTTGAACATATTTTATTTCAGCCATTACATTGT
GCGGAAAGGGAAAACGACAC

Downstream 100 bases:

>100_bases
ACAGGCTACTTACGTGCAACCCCCATCTTATTCGGTGGGGGTTGGCTACTTTTACTGTGGTTGTTTCTAAAAACAGAGTT
AACTGACTTCTTTTAAGTTA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MKVKTKLLGIISILVVSIIGIGGSSVFMISSTVKKNEELKDKMEFQKEIKHIQYELTGLSNDERGFLITRDKEYDEGMKG
KADDVLKSLDRVNDLIDEEKYQSNIEDIKTSFTQYRALNQQVVTAYSSNPKKAETIHFGEERTIRKEGVAPAVNKLSDRL
DQEVEDLKDEIQGNGKMSQSLIIIVTGISVILGIVLSIMLLKSIMVPLRSINKQLEEIAHGEADLTKKVIVKNKDEFGQL
AQSFNSFTHSLTQIVKQISSSSEQVAASSEELSASAEESKSTSEHISRAMQMAADSNVKQSSMTEKSAESITELLDSISS
VASNTGNIADLSSSMRDKAEIGSKSVNKMLDQMKFIDKSVDSAGNGLQTLVASTAEISDISSLITTISEQTNLLALNAAI
EAARAGEQGKGFAVVAEEVRKLADETNKSANHIQSVVATIQNESIETVNNIKVVQENVSSGIVLSQETTGNFNEILNLVE
QVTSQIQEVAAATQQLTSGVEVIQHTVHTLAAGTKETSANTEAVANSSQEQLHSMGEISYAAESLSQLAEELQTVINRFK
Y

Sequences:

>Translated_561_residues
MKVKTKLLGIISILVVSIIGIGGSSVFMISSTVKKNEELKDKMEFQKEIKHIQYELTGLSNDERGFLITRDKEYDEGMKG
KADDVLKSLDRVNDLIDEEKYQSNIEDIKTSFTQYRALNQQVVTAYSSNPKKAETIHFGEERTIRKEGVAPAVNKLSDRL
DQEVEDLKDEIQGNGKMSQSLIIIVTGISVILGIVLSIMLLKSIMVPLRSINKQLEEIAHGEADLTKKVIVKNKDEFGQL
AQSFNSFTHSLTQIVKQISSSSEQVAASSEELSASAEESKSTSEHISRAMQMAADSNVKQSSMTEKSAESITELLDSISS
VASNTGNIADLSSSMRDKAEIGSKSVNKMLDQMKFIDKSVDSAGNGLQTLVASTAEISDISSLITTISEQTNLLALNAAI
EAARAGEQGKGFAVVAEEVRKLADETNKSANHIQSVVATIQNESIETVNNIKVVQENVSSGIVLSQETTGNFNEILNLVE
QVTSQIQEVAAATQQLTSGVEVIQHTVHTLAAGTKETSANTEAVANSSQEQLHSMGEISYAAESLSQLAEELQTVINRFK
Y
>Mature_561_residues
MKVKTKLLGIISILVVSIIGIGGSSVFMISSTVKKNEELKDKMEFQKEIKHIQYELTGLSNDERGFLITRDKEYDEGMKG
KADDVLKSLDRVNDLIDEEKYQSNIEDIKTSFTQYRALNQQVVTAYSSNPKKAETIHFGEERTIRKEGVAPAVNKLSDRL
DQEVEDLKDEIQGNGKMSQSLIIIVTGISVILGIVLSIMLLKSIMVPLRSINKQLEEIAHGEADLTKKVIVKNKDEFGQL
AQSFNSFTHSLTQIVKQISSSSEQVAASSEELSASAEESKSTSEHISRAMQMAADSNVKQSSMTEKSAESITELLDSISS
VASNTGNIADLSSSMRDKAEIGSKSVNKMLDQMKFIDKSVDSAGNGLQTLVASTAEISDISSLITTISEQTNLLALNAAI
EAARAGEQGKGFAVVAEEVRKLADETNKSANHIQSVVATIQNESIETVNNIKVVQENVSSGIVLSQETTGNFNEILNLVE
QVTSQIQEVAAATQQLTSGVEVIQHTVHTLAAGTKETSANTEAVANSSQEQLHSMGEISYAAESLSQLAEELQTVINRFK
Y

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain

Homologues:

Organism=Escherichia coli, GI1788195, Length=300, Percent_Identity=31.3333333333333, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI2367378, Length=330, Percent_Identity=28.4848484848485, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787690, Length=377, Percent_Identity=27.8514588859416, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1788194, Length=357, Percent_Identity=26.6106442577031, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=266, Percent_Identity=32.3308270676692, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOAH_BACSU (C0SP89)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   B69896
- RefSeq:   NP_389742.2
- ProteinModelPortal:   C0SP89
- EnsemblBacteria:   EBBACT00000002817
- GeneID:   940110
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18610
- GenoList:   BSU18610
- GeneTree:   EBGT00070000031772
- ProtClustDB:   CLSK237207
- BioCyc:   BSUB:BSU18610-MONOMER
- GO:   GO:0006935
- InterPro:   IPR007891
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- PRINTS:   PR00260
- SMART:   SM00304
- SMART:   SM00283

Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal

EC number: NA

Molecular weight: Translated: 61004; Mature: 61004

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00538 CHEMOTAXIS_TRANSDUC_1; PS50111 CHEMOTAXIS_TRANSDUC_2; PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf47a264)-; HASH(0xfd52718)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKTKLLGIISILVVSIIGIGGSSVFMISSTVKKNEELKDKMEFQKEIKHIQYELTGLS
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
NDERGFLITRDKEYDEGMKGKADDVLKSLDRVNDLIDEEKYQSNIEDIKTSFTQYRALNQ
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVVTAYSSNPKKAETIHFGEERTIRKEGVAPAVNKLSDRLDQEVEDLKDEIQGNGKMSQS
HHHHHHCCCCCCCHHEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LIIIVTGISVILGIVLSIMLLKSIMVPLRSINKQLEEIAHGEADLTKKVIVKNKDEFGQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
AQSFNSFTHSLTQIVKQISSSSEQVAASSEELSASAEESKSTSEHISRAMQMAADSNVKQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH
SSMTEKSAESITELLDSISSVASNTGNIADLSSSMRDKAEIGSKSVNKMLDQMKFIDKSV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
DSAGNGLQTLVASTAEISDISSLITTISEQTNLLALNAAIEAARAGEQGKGFAVVAEEVR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHH
KLADETNKSANHIQSVVATIQNESIETVNNIKVVQENVSSGIVLSQETTGNFNEILNLVE
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
QVTSQIQEVAAATQQLTSGVEVIQHTVHTLAAGTKETSANTEAVANSSQEQLHSMGEISY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
AAESLSQLAEELQTVINRFKY
HHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MKVKTKLLGIISILVVSIIGIGGSSVFMISSTVKKNEELKDKMEFQKEIKHIQYELTGLS
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
NDERGFLITRDKEYDEGMKGKADDVLKSLDRVNDLIDEEKYQSNIEDIKTSFTQYRALNQ
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVVTAYSSNPKKAETIHFGEERTIRKEGVAPAVNKLSDRLDQEVEDLKDEIQGNGKMSQS
HHHHHHCCCCCCCHHEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LIIIVTGISVILGIVLSIMLLKSIMVPLRSINKQLEEIAHGEADLTKKVIVKNKDEFGQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
AQSFNSFTHSLTQIVKQISSSSEQVAASSEELSASAEESKSTSEHISRAMQMAADSNVKQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH
SSMTEKSAESITELLDSISSVASNTGNIADLSSSMRDKAEIGSKSVNKMLDQMKFIDKSV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
DSAGNGLQTLVASTAEISDISSLITTISEQTNLLALNAAIEAARAGEQGKGFAVVAEEVR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHH
KLADETNKSANHIQSVVATIQNESIETVNNIKVVQENVSSGIVLSQETTGNFNEILNLVE
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
QVTSQIQEVAAATQQLTSGVEVIQHTVHTLAAGTKETSANTEAVANSSQEQLHSMGEISY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
AAESLSQLAEELQTVINRFKY
HHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377