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The map label for this gene is yncE

Identifier: 255767419

GI number: 255767419

Start: 1899589

End: 1900050

Strand: Direct

Name: yncE

Synonym: BSU17650

Alternate gene names: 255767419

Gene position: 1899589-1900050 (Clockwise)

Preceding gene: 255767418

Following gene: 16078829

Centisome position: 45.06

GC content: 34.42

Gene sequence:

>462_bases
ATGAATAGGGGAGTTAGTTTTCAAATACCGAATGAATATGGAAATTTTCTATGGAGAATACTGCAGCCGGTAGAAATAGC
TAATTATAGGTGGCAAACGAGTGGGGAATCTTATTTTGTTGTAGAAGGAGAGCTCGATGATGAGGAGCTTTTTCATGACT
ACGAAATTGTTGAGGGGGCAGTTTTTGAGCAACAATTAAAAACGAATCAGTACTATACCATTTTCGTTGAACTGAAAGCA
TTTCCATATGGAAAAATGGTTAATCAAGTCAATACATATGAAGAGTTTGCTGACAGTGATTGCGAACTTGTCCTTTTGAT
AGCAGATAATAGCTACGTTTCGATTTACTGTAAAAACAAAAATATCATTGAAAAACTTTACTTCAATGCTTTACAGCATG
ATTTTGAAGACGTTCAATTTATAACTGATGAAAATGACACAAGAACAAGCCTTACTGTATGA

Upstream 100 bases:

>100_bases
AATCGGTTGAAAAGGCAGTCGATTCCTTGTTCCATAAACCTAACATCAGAGTATATAATTATACTCGTATTCACAAAAAT
CGTTTAAGTAAGGGGTATAC

Downstream 100 bases:

>100_bases
TACTCAATAAAAATTAAAGGAGCTAGTACATGACAATGCAAATTAAAATCAAGTATCTAGATGAAACACAAACAAGAATC
AGCAAAATTGAGCAGGGAGA

Product: prophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNRGVSFQIPNEYGNFLWRILQPVEIANYRWQTSGESYFVVEGELDDEELFHDYEIVEGAVFEQQLKTNQYYTIFVELKA
FPYGKMVNQVNTYEEFADSDCELVLLIADNSYVSIYCKNKNIIEKLYFNALQHDFEDVQFITDENDTRTSLTV

Sequences:

>Translated_153_residues
MNRGVSFQIPNEYGNFLWRILQPVEIANYRWQTSGESYFVVEGELDDEELFHDYEIVEGAVFEQQLKTNQYYTIFVELKA
FPYGKMVNQVNTYEEFADSDCELVLLIADNSYVSIYCKNKNIIEKLYFNALQHDFEDVQFITDENDTRTSLTV
>Mature_153_residues
MNRGVSFQIPNEYGNFLWRILQPVEIANYRWQTSGESYFVVEGELDDEELFHDYEIVEGAVFEQQLKTNQYYTIFVELKA
FPYGKMVNQVNTYEEFADSDCELVLLIADNSYVSIYCKNKNIIEKLYFNALQHDFEDVQFITDENDTRTSLTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNCE_BACSU (P94495)

Other databases:

- EMBL:   U66480
- EMBL:   AL009126
- PIR:   G69888
- RefSeq:   NP_389648.2
- EnsemblBacteria:   EBBACT00000004044
- GeneID:   939573
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17650
- NMPDR:   fig|224308.1.peg.1769
- GenoList:   BSU17650
- GeneTree:   EBGT00050000002317
- HOGENOM:   HBG338295
- ProtClustDB:   CLSK887342
- BioCyc:   BSUB:BSU17650-MONOMER
- InterPro:   IPR020216
- ProDom:   PD091678

Pfam domain/function: PF10903 DUF2691

EC number: NA

Molecular weight: Translated: 18066; Mature: 18066

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRGVSFQIPNEYGNFLWRILQPVEIANYRWQTSGESYFVVEGELDDEELFHDYEIVEGA
CCCCEEEECCHHHHHHHHHHHCCHHHCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHH
VFEQQLKTNQYYTIFVELKAFPYGKMVNQVNTYEEFADSDCELVLLIADNSYVSIYCKNK
HHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCC
NIIEKLYFNALQHDFEDVQFITDENDTRTSLTV
CHHHHHHHHHHHCCCCCEEEEECCCCCEEEECC
>Mature Secondary Structure
MNRGVSFQIPNEYGNFLWRILQPVEIANYRWQTSGESYFVVEGELDDEELFHDYEIVEGA
CCCCEEEECCHHHHHHHHHHHCCHHHCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHH
VFEQQLKTNQYYTIFVELKAFPYGKMVNQVNTYEEFADSDCELVLLIADNSYVSIYCKNK
HHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCC
NIIEKLYFNALQHDFEDVQFITDENDTRTSLTV
CHHHHHHHHHHHCCCCCEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377