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The map label for this gene is xynP

Identifier: 255767414

GI number: 255767414

Start: 1887352

End: 1888743

Strand: Direct

Name: xynP

Synonym: BSU17570

Alternate gene names: 255767414

Gene position: 1887352-1888743 (Clockwise)

Preceding gene: 255767413

Following gene: 255767415

Centisome position: 44.77

GC content: 37.5

Gene sequence:

>1392_bases
ATGCTCAGTGAAAATGTAAAGAAGATTAGCATGGTTGAAAAAGTTGGATATGCGTCTGGAGATTTTGCTTGTAATTTAAT
TTATGCAACAGTGTCTACGTATCTTTTGTTCTTCTATACAGATGTTTTTGGTTTATCGGCAGCAGCAGCCGGTACTATGT
TTTTAGTGGTTAGAATAATCGACGCTCTCGCTGATCCTTTTATCGGAACAATAGTTGACAGAACGAACAGCAGATTTGGA
CGCTTTAGACCGTATCTTTTATTCGGAGCTTTTCCATTTGTCATACTGGCAATACTCTGTTTTACAACACCAGACTTTTC
GGATATGGGGAAATTAATATATGCCTATATAACCTATGTTGGCTTGTCGCTTACATACACAACGATAAACGTTCCATATG
GCGCGTTAACTTCTGCAATGACTAGAAATAATCAAGAAGTTGTTAGTATAACTTCTGTTCGCATGTTATTTGCGAATCTT
GGGGGACTTGTCGTTGCATTTTTTGTTCCCTTACTGGCTGCTTATTTAAGCGATACTTCCGGCAACGAGTCTCTTGGCTG
GCAACTAACCATGGGTATTTTGGGAATGATAGGCGGGTGCCTTTTAATCTTTTGTTTTAAAAGCACAAAAGAGCGGGTCA
CTCTTCAAAAATCCGAAGAGAAAATTAAATTTACGGATATATTTGAGCAGTTTCGTGTTAATCGTCCACTTGTTGTATTA
AGTATTTTCTTTATTATTATTTTTGGAGTGAATTCCATCAGTAATTCGGTTGGCATTTACTACGTAACGTATAACTTAGA
AAGAGAGGATTTGGTGAAGTGGTACGGTTTGATAGGAAGTTTACCCGCTTTGGTCATTTTACCGTTTATTCCAAGGCTTC
ATCAATTTTTGGGGAAAAAGAAATTACTAAACTATGCATTATTACTGAATATTATAGGCCTCTTAGCTTTACTGTTTGTT
CCGCCAAGTAATGTTTACCTCATACTTGTCTGTCGATTAATCGCTGCTGCTGGAAGTCTCACTGCCGGGGGATATATGTG
GGCGCTTATTCCTGAAACAATTGAATATGGAGAGTACAGGACTGGGAAAAGAATGGGTGGGCTCATTTACGCTATAATCG
GATTTTTCTTTAAGTTTGGTATGGCCTTAGGAGGAGTTGTTCCGGGTCTGGTTCTTGATAAGTTTGGATATGTAGCAAAT
CAGGCACAAACCCCGGCGGCCTTAATGGGGATTTTAATTACAACAACCATTATTCCCGTGTTCTTGCTTGTTCTAGCTTT
AATTGATATTAATTTCTATAACTTAGATGAGAAAAAATATAAAAACATGGTTCGAGAATTAGAGAATAGAGACAAAGTTT
ATTTGGATCATATTGATGATTTCAAGGCTTAA

Upstream 100 bases:

>100_bases
TTTGAAAGCGCTTTTATAAAAGTTTACTGACCGTAAATTCGAGAAATTGTTATACCGTTTCACACTGTTCCATATTAAAG
GATCGAAAAGGGGAGAAATC

Downstream 100 bases:

>100_bases
AAAAGAAAATAAACTGAGGAGGAGTCCCAAATGAAGATTACCAATCCCGTACTTAAAGGATTCAATCCCGATCCAAGTAT
TTGTAGAGCAGGAGAGGATT

Product: H+-xyloside symporter

Products: Proton [Cytoplasm]; Glucuronides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MLSENVKKISMVEKVGYASGDFACNLIYATVSTYLLFFYTDVFGLSAAAAGTMFLVVRIIDALADPFIGTIVDRTNSRFG
RFRPYLLFGAFPFVILAILCFTTPDFSDMGKLIYAYITYVGLSLTYTTINVPYGALTSAMTRNNQEVVSITSVRMLFANL
GGLVVAFFVPLLAAYLSDTSGNESLGWQLTMGILGMIGGCLLIFCFKSTKERVTLQKSEEKIKFTDIFEQFRVNRPLVVL
SIFFIIIFGVNSISNSVGIYYVTYNLEREDLVKWYGLIGSLPALVILPFIPRLHQFLGKKKLLNYALLLNIIGLLALLFV
PPSNVYLILVCRLIAAAGSLTAGGYMWALIPETIEYGEYRTGKRMGGLIYAIIGFFFKFGMALGGVVPGLVLDKFGYVAN
QAQTPAALMGILITTTIIPVFLLVLALIDINFYNLDEKKYKNMVRELENRDKVYLDHIDDFKA

Sequences:

>Translated_463_residues
MLSENVKKISMVEKVGYASGDFACNLIYATVSTYLLFFYTDVFGLSAAAAGTMFLVVRIIDALADPFIGTIVDRTNSRFG
RFRPYLLFGAFPFVILAILCFTTPDFSDMGKLIYAYITYVGLSLTYTTINVPYGALTSAMTRNNQEVVSITSVRMLFANL
GGLVVAFFVPLLAAYLSDTSGNESLGWQLTMGILGMIGGCLLIFCFKSTKERVTLQKSEEKIKFTDIFEQFRVNRPLVVL
SIFFIIIFGVNSISNSVGIYYVTYNLEREDLVKWYGLIGSLPALVILPFIPRLHQFLGKKKLLNYALLLNIIGLLALLFV
PPSNVYLILVCRLIAAAGSLTAGGYMWALIPETIEYGEYRTGKRMGGLIYAIIGFFFKFGMALGGVVPGLVLDKFGYVAN
QAQTPAALMGILITTTIIPVFLLVLALIDINFYNLDEKKYKNMVRELENRDKVYLDHIDDFKA
>Mature_463_residues
MLSENVKKISMVEKVGYASGDFACNLIYATVSTYLLFFYTDVFGLSAAAAGTMFLVVRIIDALADPFIGTIVDRTNSRFG
RFRPYLLFGAFPFVILAILCFTTPDFSDMGKLIYAYITYVGLSLTYTTINVPYGALTSAMTRNNQEVVSITSVRMLFANL
GGLVVAFFVPLLAAYLSDTSGNESLGWQLTMGILGMIGGCLLIFCFKSTKERVTLQKSEEKIKFTDIFEQFRVNRPLVVL
SIFFIIIFGVNSISNSVGIYYVTYNLEREDLVKWYGLIGSLPALVILPFIPRLHQFLGKKKLLNYALLLNIIGLLALLFV
PPSNVYLILVCRLIAAAGSLTAGGYMWALIPETIEYGEYRTGKRMGGLIYAIIGFFFKFGMALGGVVPGLVLDKFGYVAN
QAQTPAALMGILITTTIIPVFLLVLALIDINFYNLDEKKYKNMVRELENRDKVYLDHIDDFKA

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family

Homologues:

Organism=Homo sapiens, GI42713696, Length=479, Percent_Identity=22.7557411273486, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1787902, Length=460, Percent_Identity=37.1739130434783, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1786466, Length=459, Percent_Identity=32.6797385620915, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI87082306, Length=458, Percent_Identity=33.6244541484716, Blast_Score=224, Evalue=8e-60,
Organism=Escherichia coli, GI145693206, Length=453, Percent_Identity=31.5673289183223, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI48994989, Length=450, Percent_Identity=30, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI1790561, Length=450, Percent_Identity=27.1111111111111, Blast_Score=154, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNAJ_BACSU (P94488)

Other databases:

- EMBL:   U66480
- EMBL:   AL009126
- PIR:   A69888
- RefSeq:   NP_389639.2
- ProteinModelPortal:   P94488
- EnsemblBacteria:   EBBACT00000001872
- GeneID:   939533
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17570
- NMPDR:   fig|224308.1.peg.1761
- GenoList:   BSU17570
- GeneTree:   EBGT00050000000688
- HOGENOM:   HBG518114
- ProtClustDB:   CLSK883495
- BioCyc:   BSUB:BSU17570-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043
- TIGRFAMs:   TIGR00792

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 51487; Mature: 51487

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50850 MFS; PS00872 NA_GALACTOSIDE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf0d51d0)-; HASH(0xf82ded0)-; HASH(0xe032a38)-; HASH(0xf74ad64)-; HASH(0xeb3c5dc)-; HASH(0xf84fad0)-; HASH(0xf84fa1c)-; HASH(0xf81ff3c)-; HASH(0xf2476fc)-; HASH(0xf74ac50)-; HASH(0xf81fdbc)-; HASH(0xf861e68)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCH
>Mature Secondary Structure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HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; Glucuronides [Periplasm] [C]

Specific reaction: Proton [Periplasm] + Glucuronides [Periplasm] = Proton [Cytoplasm] + Glucuronides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377