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The map label for this gene is ykuC

Identifier: 255767327

GI number: 255767327

Start: 1475150

End: 1476442

Strand: Reverse

Name: ykuC

Synonym: BSU14030

Alternate gene names: 255767327

Gene position: 1476442-1475150 (Counterclockwise)

Preceding gene: 16078468

Following gene: 16078466

Centisome position: 35.02

GC content: 42.54

Gene sequence:

>1293_bases
ATGGATATATTTAAAAATCGTAATTTTGTTCGTCTATTTTTCGCAGCACTCGCTTCTCAAATGGGCACGACAGTAGGCAA
CATGGCCTTTGCTTTTTTTTTGCTGGACCGATTCAGCAGCCAGCCTTCATATACGACCTTGGCGGAGCTGATGTATTCTC
TTCCGACCATATTTGTATTTCTGATCGTGGGAGTCGTCGCGGACCGGTTTGATAGAAAAAAGGTGGCAGAAAATTGTGAT
TGGATCAGAGCAGGCCTGACTGTCGTGCTTTTTTTCACTTTATTTACCGGCAATATTCCTCTTGTTTTTTGTATCTTATT
TATCAGAAGCGCTGTAACAAAGTTTTTCTTTCCGGCAGAAAACAGTTTGGTACAAGCCATTCTGCCGAAGGAGCATTATG
CGAAAGCGGCAGGGCTTAATCAGATGCTTTTTAGCATTTTTATGGTGTTTGGAGTCGGCATAGGCGCGTTTATGTACAAC
ACAATCGGTATTGAAGGCGCCATTATTCTTGATTTTGTCAGCTTTATCATTTCCGGGCTGCTGATCCGCAGCTGCCGGAT
TCCAAAAGAAGCCCGACAGCCAAACGGTGCATTCAGCTGGAGAAAGACTTCTGTTAAGGATTCAATAAATGACTTTAGAG
AAGGCATCCTCTATATTTTAAAAAACAAATTGCTGGCATCTCTTATTTTTGGCTTCTTCATTTTTGGATTTGTCAATGGA
GGATTCGCCGTATTGCCGATGTTTACAATGAAATATGGATTGGCGCCTGACCGTTATGAGTGGCATACGTCTGTATTTAC
GATCGCACTCGGGTTTGGGCTTCTGGCAGGAAGCGTAATCGGCACGCTCATCTCTAAAAAAGTGAAGCCGCACTTTTTAA
TGTCGATACCGATTTTCATTGCAGGTTTGCTGATCTTCGTCCTCGGCTACACCAATATTTTATGGGTGTATTACGCGGCA
GCTTTTGCACTGGGAATGTGTATCGGACCGATCAACATTGCAATCGGAGGGTGGATGCCAAAAATTGTTCATCCAAAACT
GATGGGACGTGTAAGCGGCATGCAGGACCCTTTTATGATGTTTGCACAATCTTTGACACTCGGCTTAGTCGCGCTGTTAT
TCCCTAAGTTTGTTTCAAACATTGATTATCTTTATTACGGCATGGGTGTTATTATCCTGCTCGTTTTTATTTTTTATTTT
ATTGCACTGCCAAAATACAGTGCTCAGGCTGTGGAAGTGAATGTTCAGGAAGCATTTCAAGAACAGCCGAAAAAGAAGGC
AAGATCTGTATAA

Upstream 100 bases:

>100_bases
AACGAGAGTCACGATTAACCGGTAATGTTTTCTTATTTGTTTCAAAAACAGGCGGTTTATAATATGATAAAGTGGGACCT
TTAGGGTAAGGAGCGTTTTT

Downstream 100 bases:

>100_bases
TGCAGGTTAAAAATGCGCTTTTTTTCTTAGAAAAAAGCGCATTTTTACATTCAATATTTGCATTTCAACTTTAAAAAAGT
ATAATCTAAACATATAGAAA

Product: efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFFLLDRFSSQPSYTTLAELMYSLPTIFVFLIVGVVADRFDRKKVAENCD
WIRAGLTVVLFFTLFTGNIPLVFCILFIRSAVTKFFFPAENSLVQAILPKEHYAKAAGLNQMLFSIFMVFGVGIGAFMYN
TIGIEGAIILDFVSFIISGLLIRSCRIPKEARQPNGAFSWRKTSVKDSINDFREGILYILKNKLLASLIFGFFIFGFVNG
GFAVLPMFTMKYGLAPDRYEWHTSVFTIALGFGLLAGSVIGTLISKKVKPHFLMSIPIFIAGLLIFVLGYTNILWVYYAA
AFALGMCIGPINIAIGGWMPKIVHPKLMGRVSGMQDPFMMFAQSLTLGLVALLFPKFVSNIDYLYYGMGVIILLVFIFYF
IALPKYSAQAVEVNVQEAFQEQPKKKARSV

Sequences:

>Translated_430_residues
MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFFLLDRFSSQPSYTTLAELMYSLPTIFVFLIVGVVADRFDRKKVAENCD
WIRAGLTVVLFFTLFTGNIPLVFCILFIRSAVTKFFFPAENSLVQAILPKEHYAKAAGLNQMLFSIFMVFGVGIGAFMYN
TIGIEGAIILDFVSFIISGLLIRSCRIPKEARQPNGAFSWRKTSVKDSINDFREGILYILKNKLLASLIFGFFIFGFVNG
GFAVLPMFTMKYGLAPDRYEWHTSVFTIALGFGLLAGSVIGTLISKKVKPHFLMSIPIFIAGLLIFVLGYTNILWVYYAA
AFALGMCIGPINIAIGGWMPKIVHPKLMGRVSGMQDPFMMFAQSLTLGLVALLFPKFVSNIDYLYYGMGVIILLVFIFYF
IALPKYSAQAVEVNVQEAFQEQPKKKARSV
>Mature_430_residues
MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFFLLDRFSSQPSYTTLAELMYSLPTIFVFLIVGVVADRFDRKKVAENCD
WIRAGLTVVLFFTLFTGNIPLVFCILFIRSAVTKFFFPAENSLVQAILPKEHYAKAAGLNQMLFSIFMVFGVGIGAFMYN
TIGIEGAIILDFVSFIISGLLIRSCRIPKEARQPNGAFSWRKTSVKDSINDFREGILYILKNKLLASLIFGFFIFGFVNG
GFAVLPMFTMKYGLAPDRYEWHTSVFTIALGFGLLAGSVIGTLISKKVKPHFLMSIPIFIAGLLIFVLGYTNILWVYYAA
AFALGMCIGPINIAIGGWMPKIVHPKLMGRVSGMQDPFMMFAQSLTLGLVALLFPKFVSNIDYLYYGMGVIILLVFIFYF
IALPKYSAQAVEVNVQEAFQEQPKKKARSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKUC_BACSU (O31695)

Other databases:

- EMBL:   AJ222587
- EMBL:   AL009126
- PIR:   H69864
- RefSeq:   NP_389286.2
- ProteinModelPortal:   O31695
- EnsemblBacteria:   EBBACT00000000934
- GeneID:   939224
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14030
- NMPDR:   fig|224308.1.peg.1405
- GenoList:   BSU14030
- GeneTree:   EBGT00070000031756
- HOGENOM:   HBG338754
- ProtClustDB:   CLSK887214
- BioCyc:   BSUB:BSU14030-MONOMER
- InterPro:   IPR004751
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- TIGRFAMs:   TIGR00900

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 48093; Mature: 48093

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xec3d064)-; HASH(0xe6bdfe0)-; HASH(0xe5b0718)-; HASH(0xdede3d0)-; HASH(0xf0403e4)-; HASH(0xc4c0858)-; HASH(0xe7b5290)-; HASH(0xed01ea4)-; HASH(0xeab269c)-; HASH(0xeafa448)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCH
>Mature Secondary Structure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HHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377