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The map label for this gene is yhbA

Identifier: 255767207

GI number: 255767207

Start: 967935

End: 969095

Strand: Direct

Name: yhbA

Synonym: BSU08910

Alternate gene names: 255767207

Gene position: 967935-969095 (Clockwise)

Preceding gene: 16077953

Following gene: 16077957

Centisome position: 22.96

GC content: 47.63

Gene sequence:

>1161_bases
ATGAACGTTTATCAGCTCAAAGAAGAATTAATTGAATACGCGAAAAGCATTGGCGTAGACAAGATTGGTTTTACGACCGC
TGATACTTTTGACAGTTTAAAAGACCGTTTGATTCTTCAAGAATCACTCGGCTATCTCTCCGGCTTTGAAGAGCCAGATA
TCGAAAAAAGGGTGACGCCGAAGCTTCTTTTGCCGAAAGCGAAATCAATAGTGGCAATTGCTCTCGCATATCCTTCCAGA
ATGAAGGATGCGCCGAGAAGCACGAGAACTGAGCGCAGGGGCATTTTTTGCAGAGCTTCCTGGGGAAAAGACTATCATGA
TGTGCTGAGGGAAAAGCTTGATCTGCTGGAGGATTTTCTAAAAAGCAAGCATGAGGATATCAGAACGAAGTCAATGGTTG
ATACAGGTGAATTGTCTGATCGCGCCGTTGCGGAACGTGCCGGAATCGGATTCAGTGCGAAAAACTGTATGATCACAACA
CCCGAGTATGGCTCTTATGTGTATTTGGCGGAAATGATCACAAATATCCCTTTTGAGCCTGATGTGCCGATTGAAGATAT
GTGCGGGTCCTGCACGAAATGCTTGGACGCCTGCCCAACGGGAGCACTGGTTAATCCCGGGCAGCTTAATGCGCAGCGCT
GCATCTCTTTTCTGACCCAGACAAAAGGATTTTTGCCTGATGAATTCCGGACAAAAATCGGAAACCGCCTGTACGGGTGC
GATACGTGCCAAACGGTATGCCCTCTCAATAAAGGGAAGGATTTTCATCTTCATCCGGAAATGGAGCCTGATCCTGAGAT
TGCCAAACCGTTATTGAAGCCGCTTTTGGCCATCAGCAATCGGGAATTTAAGGAGAAATTCGGGCATGTCTCAGGTTCTT
GGCGCGGAAAAAAACCGATTCAGCGAAACGCCATTCTCGCGCTTGCCCATTTTAAGGATGCTTCCGCACTGCCTGAATTG
ACGGAACTGATGCACAAGGATCCGCGTCCTGTCATCAGGGGGACAGCCGCATGGGCAATCGGAAAAATCGGAGACCCCGC
CTACGCGGAAGAGCTTGAAAAAGCGCTGGAAAAAGAGAAGGATGAAGAGGCAAAGCTGGAAATTGAAAAAGGAATTGAGT
TGCTAAAAGCTTCAGGCATGACTAAACAAGGCCTGTCCTGA

Upstream 100 bases:

>100_bases
ATCAAGTTTGATATTCACTAGCATTCACTCCAGTTACGTGATATCAACCTATTATAAACGCTGTGTCGTTTTATCACAAA
GAAAGGAGGCTGTGCAAAAC

Downstream 100 bases:

>100_bases
CATACGTATAGAGCAGAAGGAAAAAACACTTGAGATCATCCAAGTGTTTTTTCTCTATAAAAAAGTATGGCGGGTGGGGT
GAGCTTGAAGTACATTTTAG

Product: iron-sulfur containing oxidoreductase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNVYQLKEELIEYAKSIGVDKIGFTTADTFDSLKDRLILQESLGYLSGFEEPDIEKRVTPKLLLPKAKSIVAIALAYPSR
MKDAPRSTRTERRGIFCRASWGKDYHDVLREKLDLLEDFLKSKHEDIRTKSMVDTGELSDRAVAERAGIGFSAKNCMITT
PEYGSYVYLAEMITNIPFEPDVPIEDMCGSCTKCLDACPTGALVNPGQLNAQRCISFLTQTKGFLPDEFRTKIGNRLYGC
DTCQTVCPLNKGKDFHLHPEMEPDPEIAKPLLKPLLAISNREFKEKFGHVSGSWRGKKPIQRNAILALAHFKDASALPEL
TELMHKDPRPVIRGTAAWAIGKIGDPAYAEELEKALEKEKDEEAKLEIEKGIELLKASGMTKQGLS

Sequences:

>Translated_386_residues
MNVYQLKEELIEYAKSIGVDKIGFTTADTFDSLKDRLILQESLGYLSGFEEPDIEKRVTPKLLLPKAKSIVAIALAYPSR
MKDAPRSTRTERRGIFCRASWGKDYHDVLREKLDLLEDFLKSKHEDIRTKSMVDTGELSDRAVAERAGIGFSAKNCMITT
PEYGSYVYLAEMITNIPFEPDVPIEDMCGSCTKCLDACPTGALVNPGQLNAQRCISFLTQTKGFLPDEFRTKIGNRLYGC
DTCQTVCPLNKGKDFHLHPEMEPDPEIAKPLLKPLLAISNREFKEKFGHVSGSWRGKKPIQRNAILALAHFKDASALPEL
TELMHKDPRPVIRGTAAWAIGKIGDPAYAEELEKALEKEKDEEAKLEIEKGIELLKASGMTKQGLS
>Mature_386_residues
MNVYQLKEELIEYAKSIGVDKIGFTTADTFDSLKDRLILQESLGYLSGFEEPDIEKRVTPKLLLPKAKSIVAIALAYPSR
MKDAPRSTRTERRGIFCRASWGKDYHDVLREKLDLLEDFLKSKHEDIRTKSMVDTGELSDRAVAERAGIGFSAKNCMITT
PEYGSYVYLAEMITNIPFEPDVPIEDMCGSCTKCLDACPTGALVNPGQLNAQRCISFLTQTKGFLPDEFRTKIGNRLYGC
DTCQTVCPLNKGKDFHLHPEMEPDPEIAKPLLKPLLAISNREFKEKFGHVSGSWRGKKPIQRNAILALAHFKDASALPEL
TELMHKDPRPVIRGTAAWAIGKIGDPAYAEELEKALEKEKDEEAKLEIEKGIELLKASGMTKQGLS

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats

Homologues:

Organism=Escherichia coli, GI1790608, Length=356, Percent_Identity=29.2134831460674, Blast_Score=172, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHBA_BACSU (P97030)

Other databases:

- EMBL:   Z93102
- EMBL:   AL009126
- PIR:   E69820
- RefSeq:   NP_388772.2
- ProteinModelPortal:   P97030
- EnsemblBacteria:   EBBACT00000000703
- GeneID:   939243
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08910
- NMPDR:   fig|224308.1.peg.891
- GenoList:   BSU08910
- GeneTree:   EBGT00050000002050
- HOGENOM:   HBG529856
- ProtClustDB:   CLSK2765256
- BioCyc:   BSUB:BSU08910-MONOMER
- GO:   GO:0006810
- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155
- Gene3D:   G3DSA:1.25.10.10
- SMART:   SM00567
- TIGRFAMs:   TIGR00276

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS; SSF48371 ARM-type_fold; SSF46548 Helical_ferredxn

EC number: NA

Molecular weight: Translated: 43142; Mature: 43142

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVYQLKEELIEYAKSIGVDKIGFTTADTFDSLKDRLILQESLGYLSGFEEPDIEKRVTP
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
KLLLPKAKSIVAIALAYPSRMKDAPRSTRTERRGIFCRASWGKDYHDVLREKLDLLEDFL
HHHCCCCHHHEEHHHHCCHHHHCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
KSKHEDIRTKSMVDTGELSDRAVAERAGIGFSAKNCMITTPEYGSYVYLAEMITNIPFEP
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEHHHHHHHCCCCCC
DVPIEDMCGSCTKCLDACPTGALVNPGQLNAQRCISFLTQTKGFLPDEFRTKIGNRLYGC
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEECC
DTCQTVCPLNKGKDFHLHPEMEPDPEIAKPLLKPLLAISNREFKEKFGHVSGSWRGKKPI
CHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
QRNAILALAHFKDASALPELTELMHKDPRPVIRGTAAWAIGKIGDPAYAEELEKALEKEK
HHHHEEEEEECCCHHCCHHHHHHHHCCCCCHHHCHHHHHHCCCCCHHHHHHHHHHHHHCC
DEEAKLEIEKGIELLKASGMTKQGLS
CHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNVYQLKEELIEYAKSIGVDKIGFTTADTFDSLKDRLILQESLGYLSGFEEPDIEKRVTP
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
KLLLPKAKSIVAIALAYPSRMKDAPRSTRTERRGIFCRASWGKDYHDVLREKLDLLEDFL
HHHCCCCHHHEEHHHHCCHHHHCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
KSKHEDIRTKSMVDTGELSDRAVAERAGIGFSAKNCMITTPEYGSYVYLAEMITNIPFEP
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEHHHHHHHCCCCCC
DVPIEDMCGSCTKCLDACPTGALVNPGQLNAQRCISFLTQTKGFLPDEFRTKIGNRLYGC
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEECC
DTCQTVCPLNKGKDFHLHPEMEPDPEIAKPLLKPLLAISNREFKEKFGHVSGSWRGKKPI
CHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
QRNAILALAHFKDASALPELTELMHKDPRPVIRGTAAWAIGKIGDPAYAEELEKALEKEK
HHHHEEEEEECCCHHCCHHHHHHHHCCCCCHHHCHHHHHHCCCCCHHHHHHHHHHHHHCC
DEEAKLEIEKGIELLKASGMTKQGLS
CHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377