| Definition | Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome. |
|---|---|
| Accession | NC_000964 |
| Length | 4,215,606 |
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The map label for this gene is spo0M
Identifier: 255767198
GI number: 255767198
Start: 953373
End: 954149
Strand: Reverse
Name: spo0M
Synonym: BSU08760
Alternate gene names: 255767198
Gene position: 954149-953373 (Counterclockwise)
Preceding gene: 255767200
Following gene: 50812203
Centisome position: 22.63
GC content: 45.3
Gene sequence:
>777_bases ATGTCATTTTTTAAGAAGCTTGCGGCAAGTGCCGGAATTGGAGCTGCAAAAGTAGATACAATTTTAGAAAAAGACGCATA TTTTCCAGGAGAAGAAGTACAGGGAACGGTACATGTCAAAGGCGGAAAAATCGCTCAGGACATCCGTTATATCGATTTAC AGCTTAGCACACGGTATGTCATTGTAAAAGACGATGAAGAGCACCGGAAATACGCTACAATTCATTCTTTCCGGGTCACT GGTTCATTTACCATACAGCCTGGTGAAGAGCATCAATTTCCGTTCACATTCACTCTGCCTCTAGATACGCCGATCACTGT AGGGAAAGTAGAGGTTGCCGTGGTGACAGACCTTGACATTCAAGGCGGTATCGATAAATCCGATCATGACCGCATTTTCG TTGAAGCGCACCCTTGGATTGAAAATGTGCTTGAAGCAATCGAAAACCTGGGCTTCCGTCTTAACGAAGCAGACTGCGAA CAAGCGCCCTACTTCCAGCGTCGTCTTCCGTTCGTTCAAGAATTCGAATTCGTTCCGACTTCCGGATATTATCGTCAGAT GCTTGATGAATTAGAGCTCATTTTCCTTTTAGACGAAGACGGTTTGGAAATCATTTTCGAAGTCGACCGCAGAGCAAGAG GACTCCGAGGGTGGTTGGAAGAGATGTATAATGACGGAGAACAGCTTGTACGCGTCCGTTTCAGCCAATCAGAGCTTGAA GATACAGAAGAGCTAGAAGAGGTGCTAGAAGAGATCCTAGACCAATACGCTGAGTAA
Upstream 100 bases:
>100_bases GCCGAGACGAATAATAGGAAAAAAGTATGAATCAAACGAATCTTTTTTCCTCCTTCTTACGTATATCTGTTGAGAAAAAA GAAAAAGGGGAAGATCTAAC
Downstream 100 bases:
>100_bases GTATAAAAAGGAGCCGAGGCTCCTTTTCTTTAATAAAAAATAAAAACCCGTTTCTGTTAAGAAACGGGTTTTTCAGTATA CCGGTGGTCGGGGTCGAACC
Product: sporulation-control gene
Products: NA
Alternate protein names: Stage 0 sporulation protein M
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSFFKKLAASAGIGAAKVDTILEKDAYFPGEEVQGTVHVKGGKIAQDIRYIDLQLSTRYVIVKDDEEHRKYATIHSFRVT GSFTIQPGEEHQFPFTFTLPLDTPITVGKVEVAVVTDLDIQGGIDKSDHDRIFVEAHPWIENVLEAIENLGFRLNEADCE QAPYFQRRLPFVQEFEFVPTSGYYRQMLDELELIFLLDEDGLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELE DTEELEEVLEEILDQYAE
Sequences:
>Translated_258_residues MSFFKKLAASAGIGAAKVDTILEKDAYFPGEEVQGTVHVKGGKIAQDIRYIDLQLSTRYVIVKDDEEHRKYATIHSFRVT GSFTIQPGEEHQFPFTFTLPLDTPITVGKVEVAVVTDLDIQGGIDKSDHDRIFVEAHPWIENVLEAIENLGFRLNEADCE QAPYFQRRLPFVQEFEFVPTSGYYRQMLDELELIFLLDEDGLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELE DTEELEEVLEEILDQYAE >Mature_257_residues SFFKKLAASAGIGAAKVDTILEKDAYFPGEEVQGTVHVKGGKIAQDIRYIDLQLSTRYVIVKDDEEHRKYATIHSFRVTG SFTIQPGEEHQFPFTFTLPLDTPITVGKVEVAVVTDLDIQGGIDKSDHDRIFVEAHPWIENVLEAIENLGFRLNEADCEQ APYFQRRLPFVQEFEFVPTSGYYRQMLDELELIFLLDEDGLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELED TEELEEVLEEILDQYAE
Specific function: Controls the expression of spo0A and is required to pass the morphological stage 0 of sporulation
COG id: COG4326
COG function: function code R; Sporulation control protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spo0M family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SP0M_BACSU (P71088)
Other databases:
- EMBL: D89936 - EMBL: Z82044 - EMBL: AL009126 - PIR: D69816 - RefSeq: NP_388756.2 - EnsemblBacteria: EBBACT00000002614 - GeneID: 939725 - GenomeReviews: AL009126_GR - KEGG: bsu:BSU08760 - NMPDR: fig|224308.1.peg.875 - GenoList: BSU08760 - GeneTree: EBGT00050000004509 - HOGENOM: HBG491139 - ProtClustDB: CLSK886916 - BioCyc: BSUB:BSU08760-MONOMER - InterPro: IPR014756 - InterPro: IPR009776
Pfam domain/function: PF07070 Spo0M; SSF81296 Ig_E-set
EC number: NA
Molecular weight: Translated: 29734; Mature: 29602
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFKKLAASAGIGAAKVDTILEKDAYFPGEEVQGTVHVKGGKIAQDIRYIDLQLSTRYV CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHCCEEEEEEEEEEEEE IVKDDEEHRKYATIHSFRVTGSFTIQPGEEHQFPFTFTLPLDTPITVGKVEVAVVTDLDI EEECCHHHHHEEEEEEEEEEEEEEECCCCCCCCCEEEEECCCCCEEECEEEEEEEEECCC QGGIDKSDHDRIFVEAHPWIENVLEAIENLGFRLNEADCEQAPYFQRRLPFVQEFEFVPT CCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCC SGYYRQMLDELELIFLLDEDGLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELE CCHHHHHHHHEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHEEECCCHHHCC DTEELEEVLEEILDQYAE CHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFFKKLAASAGIGAAKVDTILEKDAYFPGEEVQGTVHVKGGKIAQDIRYIDLQLSTRYV CHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHCCEEEEEEEEEEEEE IVKDDEEHRKYATIHSFRVTGSFTIQPGEEHQFPFTFTLPLDTPITVGKVEVAVVTDLDI EEECCHHHHHEEEEEEEEEEEEEEECCCCCCCCCEEEEECCCCCEEECEEEEEEEEECCC QGGIDKSDHDRIFVEAHPWIENVLEAIENLGFRLNEADCEQAPYFQRRLPFVQEFEFVPT CCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCC SGYYRQMLDELELIFLLDEDGLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELE CCHHHHHHHHEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHEEECCCHHHCC DTEELEEVLEEILDQYAE CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9795118; 9202460; 9384377