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The map label for this gene is ybbF

Identifier: 255767044

GI number: 255767044

Start: 189790

End: 191157

Strand: Reverse

Name: ybbF

Synonym: BSU01680

Alternate gene names: 255767044

Gene position: 191157-189790 (Counterclockwise)

Preceding gene: 16077237

Following gene: 255767043

Centisome position: 4.53

GC content: 47.37

Gene sequence:

>1368_bases
ATGAGCAAAGAAAATAACTACCATCATCTCGCACAGAAAATCCTTGAGCTATGCGGAGGAAAATCCAATATTTCTTCATA
TACGCATTGCATGACACGCCTGCGCATTACGCCTTACGATGAAAGCAAAGCGGATGCTCAGGCTTTAAGAAAGCTTGACG
GCGTATTGGGGGTCGTTGAAGCTGAAACCTTACAAATTATCCTCGGCACAGGAGTTGTCAATCATGTTACAGCTGCTTTC
TCAAAGCTCGTGTCAGCAGAAGAAGGTGCCGATGTCAAAGAAGCAGCGGCCAAAAAGAAAGCCGATATCAATCGGAAAAA
TGCCACTCCTTTTAAACTTTTCTTACGTAAAATTGCCAGCATTTTTATCCCTCTTATTCCCGCTCTAGTCGCTTCCGGTT
TAATTACTGGGATTACCAAAGCAATTATTCAAGCAGGCTGGCTCTCTGCAGACTCACAAATTGCGATTATCCTGACAGTC
ATCGGATCAGGGCTGTTCACTTATCTCGGCATTCTCGTCGGTATTAACGCTTCGAAAGAATTTGGCGGGACACCCGCACT
TGGGGCTTTGGCCGGGATCTTGATTATCAATCCGGAGATCGCAAAAATCAGTTTATTTGGAGAAGAGCTTCTCCCGGGCA
GGGGAGGTCTGATCGGCGTCCTTTTCGCAGCCATATTCATTGCTTACACCGAACAATTTATTCGCCGTTTTATTCCTCAA
TCACTTGATATCATTGTCACACCCACCGTTTCACTGTTAATCACCGGAATCGTAACGTATGTCGTATTTATGCCTTTAGG
CGGATTCATTTCTGATGCTATTACATCCGGCCTACTGTCCATCCTGGACATCGGCGGCATCGCTGCGGGCTTTATTCTGG
GCGCAACCTTCCTTCCTCTCGTCGTAACCGGACTGCATCAAGGCTTGACGCCTGTGCACATGGAACTGATCAATTCAATT
GGCAATGATCCTCTGCTCCCTATTTTGGCTATGGGAGGTGCAGGACAGGTAGGCGCGGCCTTTGCCGTTTTCGTGAAGAC
GAAAAAAACAACACTGAGGAAAGCAATCGCCGGCGGGCTTCCATCGGGACTGCTCGGCATTGGTGAACCGCTTATTTTCG
GAGTCACGCTGCCGCTTGGCCGTCCGTTTTTAACAGCATGTTTAGGAGCTGGAATCGGCGGCGCCTTTCAAGCTTATTTT
CAAGTAGCCACCATTGCGATTGGTGTCTCCGGACTGCCGCTATCTTTTCTAGTCCTGCCTTCGCAAATCATCCTGTATAT
CGTTGGGCTCTTTATTTCCTACGCGGCCGGTTTTTTATTGACCTATGCATTCGGATATAAAGATGAAATGGCTTCTCAGT
TCGATTAA

Upstream 100 bases:

>100_bases
GCTGAGCAGTATGAAACGACAACCGGTTATATAGATAAAACGAGAGCAGCCATACAATCTATGAGAATAAAATAAGGCAT
CTTGAAGGGGAGGGGTTTTA

Downstream 100 bases:

>100_bases
ATTGTTTCTGTTTTAGGGATAGTAAACGGGATAGAAGCACAGAAAGGGGCTAGCCTGTGAAAACAAAGACACTGTTCATA
TTCAGTGCCATTTTAACCCT

Product: sugar phosphotransferase enzyme II

Products: NA

Alternate protein names: Phosphotransferase enzyme IIB component; PTS system EIIB component; Permease IIC component; PTS system EIIC component

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MSKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVEAETLQIILGTGVVNHVTAAF
SKLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIASIFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTV
IGSGLFTYLGILVGINASKEFGGTPALGALAGILIINPEIAKISLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRRFIPQ
SLDIIVTPTVSLLITGIVTYVVFMPLGGFISDAITSGLLSILDIGGIAAGFILGATFLPLVVTGLHQGLTPVHMELINSI
GNDPLLPILAMGGAGQVGAAFAVFVKTKKTTLRKAIAGGLPSGLLGIGEPLIFGVTLPLGRPFLTACLGAGIGGAFQAYF
QVATIAIGVSGLPLSFLVLPSQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD

Sequences:

>Translated_455_residues
MSKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVEAETLQIILGTGVVNHVTAAF
SKLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIASIFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTV
IGSGLFTYLGILVGINASKEFGGTPALGALAGILIINPEIAKISLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRRFIPQ
SLDIIVTPTVSLLITGIVTYVVFMPLGGFISDAITSGLLSILDIGGIAAGFILGATFLPLVVTGLHQGLTPVHMELINSI
GNDPLLPILAMGGAGQVGAAFAVFVKTKKTTLRKAIAGGLPSGLLGIGEPLIFGVTLPLGRPFLTACLGAGIGGAFQAYF
QVATIAIGVSGLPLSFLVLPSQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD
>Mature_454_residues
SKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVEAETLQIILGTGVVNHVTAAFS
KLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIASIFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTVI
GSGLFTYLGILVGINASKEFGGTPALGALAGILIINPEIAKISLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRRFIPQS
LDIIVTPTVSLLITGIVTYVVFMPLGGFISDAITSGLLSILDIGGIAAGFILGATFLPLVVTGLHQGLTPVHMELINSIG
NDPLLPILAMGGAGQVGAAFAVFVKTKKTTLRKAIAGGLPSGLLGIGEPLIFGVTLPLGRPFLTACLGAGIGGAFQAYFQ
VATIAIGVSGLPLSFLVLPSQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane

COG id: COG1263

COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-1 domain

Homologues:

Organism=Escherichia coli, GI1788769, Length=475, Percent_Identity=38.3157894736842, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI1790159, Length=440, Percent_Identity=30.2272727272727, Blast_Score=179, Evalue=4e-46,
Organism=Escherichia coli, GI2367362, Length=449, Percent_Identity=27.8396436525612, Blast_Score=174, Evalue=2e-44,
Organism=Escherichia coli, GI48994906, Length=475, Percent_Identity=28.6315789473684, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PTXBC_BACSU (Q797S1)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_388049.3
- ProteinModelPortal:   Q797S1
- SMR:   Q797S1
- EnsemblBacteria:   EBBACT00000000169
- GeneID:   938879
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU01680
- GenoList:   BSU01680
- GeneTree:   EBGT00050000000033
- HOGENOM:   HBG673521
- ProtClustDB:   CLSK2765232
- BioCyc:   BSUB:BSU01680-MONOMER
- InterPro:   IPR018113
- InterPro:   IPR001996
- InterPro:   IPR003352
- InterPro:   IPR013013
- Gene3D:   G3DSA:3.30.1360.60

Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC; SSF55604 PTS_EIIB

EC number: =2.7.1.69

Molecular weight: Translated: 47601; Mature: 47470

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS51098 PTS_EIIB_TYPE_1; PS01035 PTS_EIIB_TYPE_1_CYS; PS51103 PTS_EIIC_TYPE_1

Important sites: ACT_SITE 30-30

Signals:

None

Transmembrane regions:

HASH(0xbfddd6c)-; HASH(0xc53785c)-; HASH(0x40aad400)-; HASH(0xb0a07c8)-; HASH(0xc7c58b4)-; HASH(0xc4f9b4c)-; HASH(0xbe82a54)-; HASH(0x40a808d4)-; HASH(0xbe28d10)-; HASH(0xc7bef5c)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVE
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
AETLQIILGTGVVNHVTAAFSKLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIAS
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
IFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTVIGSGLFTYLGILVGINASKE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
FGGTPALGALAGILIINPEIAKISLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRRFIPQ
CCCCCCHHHHHHHHEECCCCEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SLDIIVTPTVSLLITGIVTYVVFMPLGGFISDAITSGLLSILDIGGIAAGFILGATFLPL
CCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVTGLHQGLTPVHMELINSIGNDPLLPILAMGGAGQVGAAFAVFVKTKKTTLRKAIAGGL
HHHHHHHCCCHHHHHHHHHCCCCCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PSGLLGIGEPLIFGVTLPLGRPFLTACLGAGIGGAFQAYFQVATIAIGVSGLPLSFLVLP
CCCHHHCCCHHHEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
SQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH
>Mature Secondary Structure 
SKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVE
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
AETLQIILGTGVVNHVTAAFSKLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIAS
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
IFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTVIGSGLFTYLGILVGINASKE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
FGGTPALGALAGILIINPEIAKISLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRRFIPQ
CCCCCCHHHHHHHHEECCCCEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SLDIIVTPTVSLLITGIVTYVVFMPLGGFISDAITSGLLSILDIGGIAAGFILGATFLPL
CCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVTGLHQGLTPVHMELINSIGNDPLLPILAMGGAGQVGAAFAVFVKTKKTTLRKAIAGGL
HHHHHHHCCCHHHHHHHHHCCCCCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PSGLLGIGEPLIFGVTLPLGRPFLTACLGAGIGGAFQAYFQVATIAIGVSGLPLSFLVLP
CCCHHHCCCHHHEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
SQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377