Click here to switch to the map view.

The map label for this gene is parA

Identifier: 16081149

GI number: 16081149

Start: 4206397

End: 4207158

Strand: Reverse

Name: parA

Synonym: BSU40970

Alternate gene names: 16081149

Gene position: 4207158-4206397 (Counterclockwise)

Preceding gene: 16081151

Following gene: 16081148

Centisome position: 99.8

GC content: 42.78

Gene sequence:

>762_bases
GTGGGAAAAATCATAGCAATTACGAACCAAAAAGGCGGGGTCGGCAAAACAACGACGTCTGTCAACCTTGGGGCATGTTT
GGCTTACATAGGGAAAAGGGTTCTGCTGGTAGATATTGATCCGCAGGGAAATGCGACAAGCGGATTAGGGATTGAAAAAG
CCGATGTAGAGCAGTGTGTGTACGATATTTTAGTAGATGATGCAGATGTAATAGATATTATTAAAGCAACGACAGTAGAG
AACTTGGATGTGATTCCTGCGACGATTCAGCTTGCAGGGGCTGAGATCGAGCTGGTTCCTACAATATCAAGAGAAGTGAG
ATTGAAGAGAGCGCTTGAAGCAGTAAAGCAAAATTATGATTATATTATCATTGATTGTCCGCCGTCATTGGGCTTGCTGA
CGATTAATGCCCTTACTGCCTCGGATTCCGTTGTGATTCCTGTACAGTGCGAATATTATGCCTTGGAGGGTCTCAGCCAG
TTATTAAATACAGTACGTCTTGTGCAAAAGCATTTGAATACTGATTTAATGATTGAAGGTGTATTGCTGACAATGCTTGA
TGCCCGGACAAACCTTGGCATTCAAGTGATTGAAGAGGTTAAAAAGTATTTTAGGGATAAAGTATATAAGACAGTTATTC
CGCGTAATGTCCGTCTGAGTGAGGCACCGAGTCACGGAAAACCCATCATTTTATACGATCCGCGGTCAAGAGGTGCGGAA
GTATATTTAGATTTAGCAAAGGAAGTGGCTGCGAATGGCTAA

Upstream 100 bases:

>100_bases
CTGATTCGGAACAAAATGATGAAAAAAATGAAACGCTTTAATCTTTTTTTGATAGAATAGAAGCAAGATAGTACATGTTC
ATGTGAAAGTAGGTGACATC

Downstream 100 bases:

>100_bases
AGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAAAATTGCCG
ATTTACGCCCTAATCCTTAT

Product: chromosome partitioning protein; transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGLGIEKADVEQCVYDILVDDADVIDIIKATTVE
NLDVIPATIQLAGAEIELVPTISREVRLKRALEAVKQNYDYIIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQ
LLNTVRLVQKHLNTDLMIEGVLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAE
VYLDLAKEVAANG

Sequences:

>Translated_253_residues
MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGLGIEKADVEQCVYDILVDDADVIDIIKATTVE
NLDVIPATIQLAGAEIELVPTISREVRLKRALEAVKQNYDYIIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQ
LLNTVRLVQKHLNTDLMIEGVLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAE
VYLDLAKEVAANG
>Mature_252_residues
GKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGLGIEKADVEQCVYDILVDDADVIDIIKATTVEN
LDVIPATIQLAGAEIELVPTISREVRLKRALEAVKQNYDYIIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQL
LNTVRLVQKHLNTDLMIEGVLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAEV
YLDLAKEVAANG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family

Homologues:

Organism=Escherichia coli, GI1787423, Length=257, Percent_Identity=25.2918287937743, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SOJ_BACSU (P37522)

Other databases:

- EMBL:   X62539
- EMBL:   D26185
- EMBL:   AL009126
- PIR:   I40444
- RefSeq:   NP_391977.1
- ProteinModelPortal:   P37522
- SMR:   P37522
- IntAct:   P37522
- EnsemblBacteria:   EBBACT00000000776
- GeneID:   937928
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40970
- NMPDR:   fig|224308.1.peg.4103
- GenoList:   BSU40970
- GeneTree:   EBGT00050000000811
- HOGENOM:   HBG756201
- OMA:   NLVGMEV
- ProtClustDB:   CLSK2517492
- BioCyc:   BSUB:BSU40970-MONOMER
- InterPro:   IPR002586
- InterPro:   IPR000392
- PRINTS:   PR00091

Pfam domain/function: PF01656 CbiA

EC number: NA

Molecular weight: Translated: 27543; Mature: 27412

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGLGIEKADVEQCV
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YDILVDDADVIDIIKATTVENLDVIPATIQLAGAEIELVPTISREVRLKRALEAVKQNYD
HHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCC
YIIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQLLNTVRLVQKHLNTDLMIEG
EEEEECCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
VLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAE
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCCCH
VYLDLAKEVAANG
HHHHHHHHHHCCC
>Mature Secondary Structure 
GKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGLGIEKADVEQCV
CEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YDILVDDADVIDIIKATTVENLDVIPATIQLAGAEIELVPTISREVRLKRALEAVKQNYD
HHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCC
YIIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQLLNTVRLVQKHLNTDLMIEG
EEEEECCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
VLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAE
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCCCH
VYLDLAKEVAANG
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208