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The map label for this gene is ssbA

Identifier: 16081142

GI number: 16081142

Start: 4198886

End: 4199404

Strand: Reverse

Name: ssbA

Synonym: BSU40900

Alternate gene names: 16081142

Gene position: 4199404-4198886 (Counterclockwise)

Preceding gene: 16081143

Following gene: 50812313

Centisome position: 99.62

GC content: 46.82

Gene sequence:

>519_bases
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA

Upstream 100 bases:

>100_bases
CGTCTAGCTAAGATCAGTGACGATATCATTCGCCACATTGTTGTTAAAGAAGAAGAATAAGCAATTTTGAAATATATAAT
GGTAAAAGGTGGTCTTTCTT

Downstream 100 bases:

>100_bases
TGTGATTATCGCCTAAAATGAAAAAGAAAGGAGGGAAATGACAATGGCAGGAGGACGCAGAGGCGGTCGTGCGAAACGCC
GTAAAGTGTGTTATTTCACT

Product: single-strand DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF

Sequences:

>Translated_172_residues
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
>Mature_172_residues
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF

Specific function: Essential for replication of the chromosome. It is also involved in DNA recombination and repair. Binds ssDNA

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=116, Percent_Identity=37.9310344827586, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB1_BACSU (P37455)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S66014
- RefSeq:   NP_391970.1
- ProteinModelPortal:   P37455
- SMR:   P37455
- PhosSite:   P37455
- EnsemblBacteria:   EBBACT00000002733
- GeneID:   937911
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40900
- NMPDR:   fig|224308.1.peg.4096
- GenoList:   BSU40900
- GeneTree:   EBGT00050000001256
- HOGENOM:   HBG755544
- OMA:   NQANGER
- ProtClustDB:   CLSK888214
- BioCyc:   BSUB:BSU40900-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 18743; Mature: 18743

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAEN
CCCEEEEEEECCCCCCEEECCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
VANFLKKGSLAGVDGRLQTRNYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGN
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
SGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDGKPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAEN
CCCEEEEEEECCCCCCEEECCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
VANFLKKGSLAGVDGRLQTRNYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGN
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
SGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDGKPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377