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The map label for this gene is yyaL

Identifier: 16081134

GI number: 16081134

Start: 4191198

End: 4193267

Strand: Direct

Name: yyaL

Synonym: BSU40820

Alternate gene names: 16081134

Gene position: 4191198-4193267 (Clockwise)

Preceding gene: 16081133

Following gene: 255767876

Centisome position: 99.42

GC content: 47.34

Gene sequence:

>2070_bases
ATGCCAAACAAAAGTAAACCCAATAGATTAATCAATGAGAAATCACCATATTTACTCCAACACGCCCACAACCCTGTGGA
CTGGTTCCCGTGGGGAGAAGAAGCTTTTGAAAAAGCAAAACGCGAAAACAAGCCGGTTCTGGTCAGCATCGGTTATTCGA
CTTGTCATTGGTGCCACGTGATGGCCCACGAAAGCTTTGAAGACGAAGAAATCGCGCGTCTTCTCAATGAACGGTTTGTG
GCGATTAAAGTCGACCGGGAAGAGCGGCCTGATGTGGATTCTGTTTATATGAGAATCTGCCAGCTGATGACCGGGCAGGG
CGGCTGGCCGCTGAATGTGTTTATCACGCCTGATCAAAAGCCGTTTTACGCGGGTACATATTTTCCAAAGACGAGCAAAT
TCAATCGTCCCGGTTTTGTTGATGTGCTTGAGCATCTGTCTGAGACGTTTGCGAACGACCGCGAGCATGTCGAGGATATT
GCGGAGAACGCCGCTAAACATTTGCAGACCAAAACAGCTGCAAAAACTGGTGAGGGCCTTAGCGAATCAGCGATTCACCG
GACATTCCAGCAGCTTGCCAGCGGGTTTGACACGATCTACGGCGGTTTCGGGCAGGCACCGAAATTTCCAATGCCTCATA
TGCTGATGTATTTGCTACGTTATGATCACAATACAGGGCAGGAGAACGCTCTATACAACGTGACGAAAACATTGGACAGC
ATGGCGAATGGCGGCATTTACGATCATATCGGCTATGGGTTCGCCCGCTATTCGACCGATGACGAGTGGCTCGTTCCCCA
CTTTGAAAAAATGCTGTACGACAATGCGCTGCTGCTGACCGCTTATACAGAAGCCTATCAGGTCACGCAAAACAGCCGCT
ATAAAGAGATTTGTGAGCAGATCATTACGTTCATTCAGAGGGAAATGACTCATGAAGACGGAAGCTTTTTCTCGGCTTTG
GACGCGGACACAGAAGGAGAAGAAGGAAAGTACTACGTGTGGTCAAAGGAAGAGATTCTAAAAACGCTCGGGGACGATCT
CGGAACGCTGTATTGCCAAGTGTATGACATCACTGAAGAAGGAAACTTTGAAGGCAAAAATATTCCTAACCTCATTCACA
CAAAGCGAGAACAAATCAAAGAGGATGCCGGGTTAACCGAAAAAGAGCTCAGTCTCAAACTCGAAGACGCAAGACAGCAG
CTCTTGAAGACACGCGAGGAAAGAACCTATCCGCATGTCGATGATAAAGTGCTTACCTCATGGAACGCGCTGATGATCGC
GGGTCTTGCGAAAGCGGCAAAGGTATACCAGGAGCCGAAATATCTCAGCCTAGCGAAAGACGCCATCACATTTATTGAAA
ACAAATTAATCATCGACGGCCGTGTGATGGTCCGATATCGTGATGGCGAAGTGAAAAACAAAGGCTTTATCGACGATTAC
GCTTTTCTCCTATGGGCTTATCTGGATCTCTATGAAGCTTCGTTTGATCTTTCTTATTTACAAAAAGCGAAGAAACTGAC
AGACGATATGATCAGCTTATTTTGGGATGAGGAGCATGGCGGATTCTACTTCACCGGACACGATGCAGAAGCCTTAATCG
TACGGGAAAAAGAAGTGTACGACGGCGCCGTGCCTTCAGGAAACAGTGTGGCAGCTGTTCAGCTGCTGCGTCTCGGGCAA
GTCACAGGCGACTTATCACTGATCGAAAAAGCGGAAACAATGTTTTCCGTGTTCAAGCCAGACATAGAAGCGTATCCGAG
CGGCCATGCTTTCTTTATGCAAAGTGTGTTAAGGCATCTGATGCCTAAAAAAGAAATCGTGATTTTTGGCAGCGCAGACG
ATCCAGCCAGAAAACAAATTATAGCGGAGCTTCAAAAAGCCTTTAAGCCCAACGACTCCATTCTGGTGGCAGAGCAGCCC
GAGCAATGCAAAGACATTGCGCCATTTGCAGCAGACTACCGCATCATAGACGGCAAAACAACCGTTTATATTTGTGAAAA
CTTCGCCTGCCAGCAACCGACAACAAATATTGAAGAAGCGATCCACACATTAATAAGCAGCAGGGATTAA

Upstream 100 bases:

>100_bases
ACAATACTAAAGAACAGTCAGCTATATAAAGAAATAGGGAGTATTTTTGAGAAAATGTGTTAAGTTAAATATACACTAAT
TATAGGAAGAAGGTGATCCC

Downstream 100 bases:

>100_bases
GACCCTTGCTGCTTACTTTTTGATTTCTTATGGTACCATAAAGCGATCCCCGCAAACACAAGGTTGACCGCTATCGTAAA
GAAAGCCTCCCACATCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 688

Protein sequence:

>689_residues
MPNKSKPNRLINEKSPYLLQHAHNPVDWFPWGEEAFEKAKRENKPVLVSIGYSTCHWCHVMAHESFEDEEIARLLNERFV
AIKVDREERPDVDSVYMRICQLMTGQGGWPLNVFITPDQKPFYAGTYFPKTSKFNRPGFVDVLEHLSETFANDREHVEDI
AENAAKHLQTKTAAKTGEGLSESAIHRTFQQLASGFDTIYGGFGQAPKFPMPHMLMYLLRYDHNTGQENALYNVTKTLDS
MANGGIYDHIGYGFARYSTDDEWLVPHFEKMLYDNALLLTAYTEAYQVTQNSRYKEICEQIITFIQREMTHEDGSFFSAL
DADTEGEEGKYYVWSKEEILKTLGDDLGTLYCQVYDITEEGNFEGKNIPNLIHTKREQIKEDAGLTEKELSLKLEDARQQ
LLKTREERTYPHVDDKVLTSWNALMIAGLAKAAKVYQEPKYLSLAKDAITFIENKLIIDGRVMVRYRDGEVKNKGFIDDY
AFLLWAYLDLYEASFDLSYLQKAKKLTDDMISLFWDEEHGGFYFTGHDAEALIVREKEVYDGAVPSGNSVAAVQLLRLGQ
VTGDLSLIEKAETMFSVFKPDIEAYPSGHAFFMQSVLRHLMPKKEIVIFGSADDPARKQIIAELQKAFKPNDSILVAEQP
EQCKDIAPFAADYRIIDGKTTVYICENFACQQPTTNIEEAIHTLISSRD

Sequences:

>Translated_689_residues
MPNKSKPNRLINEKSPYLLQHAHNPVDWFPWGEEAFEKAKRENKPVLVSIGYSTCHWCHVMAHESFEDEEIARLLNERFV
AIKVDREERPDVDSVYMRICQLMTGQGGWPLNVFITPDQKPFYAGTYFPKTSKFNRPGFVDVLEHLSETFANDREHVEDI
AENAAKHLQTKTAAKTGEGLSESAIHRTFQQLASGFDTIYGGFGQAPKFPMPHMLMYLLRYDHNTGQENALYNVTKTLDS
MANGGIYDHIGYGFARYSTDDEWLVPHFEKMLYDNALLLTAYTEAYQVTQNSRYKEICEQIITFIQREMTHEDGSFFSAL
DADTEGEEGKYYVWSKEEILKTLGDDLGTLYCQVYDITEEGNFEGKNIPNLIHTKREQIKEDAGLTEKELSLKLEDARQQ
LLKTREERTYPHVDDKVLTSWNALMIAGLAKAAKVYQEPKYLSLAKDAITFIENKLIIDGRVMVRYRDGEVKNKGFIDDY
AFLLWAYLDLYEASFDLSYLQKAKKLTDDMISLFWDEEHGGFYFTGHDAEALIVREKEVYDGAVPSGNSVAAVQLLRLGQ
VTGDLSLIEKAETMFSVFKPDIEAYPSGHAFFMQSVLRHLMPKKEIVIFGSADDPARKQIIAELQKAFKPNDSILVAEQP
EQCKDIAPFAADYRIIDGKTTVYICENFACQQPTTNIEEAIHTLISSRD
>Mature_688_residues
PNKSKPNRLINEKSPYLLQHAHNPVDWFPWGEEAFEKAKRENKPVLVSIGYSTCHWCHVMAHESFEDEEIARLLNERFVA
IKVDREERPDVDSVYMRICQLMTGQGGWPLNVFITPDQKPFYAGTYFPKTSKFNRPGFVDVLEHLSETFANDREHVEDIA
ENAAKHLQTKTAAKTGEGLSESAIHRTFQQLASGFDTIYGGFGQAPKFPMPHMLMYLLRYDHNTGQENALYNVTKTLDSM
ANGGIYDHIGYGFARYSTDDEWLVPHFEKMLYDNALLLTAYTEAYQVTQNSRYKEICEQIITFIQREMTHEDGSFFSALD
ADTEGEEGKYYVWSKEEILKTLGDDLGTLYCQVYDITEEGNFEGKNIPNLIHTKREQIKEDAGLTEKELSLKLEDARQQL
LKTREERTYPHVDDKVLTSWNALMIAGLAKAAKVYQEPKYLSLAKDAITFIENKLIIDGRVMVRYRDGEVKNKGFIDDYA
FLLWAYLDLYEASFDLSYLQKAKKLTDDMISLFWDEEHGGFYFTGHDAEALIVREKEVYDGAVPSGNSVAAVQLLRLGQV
TGDLSLIEKAETMFSVFKPDIEAYPSGHAFFMQSVLRHLMPKKEIVIFGSADDPARKQIIAELQKAFKPNDSILVAEQPE
QCKDIAPFAADYRIIDGKTTVYICENFACQQPTTNIEEAIHTLISSRD

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5

Homologues:

Organism=Homo sapiens, GI31542723, Length=720, Percent_Identity=38.6111111111111, Blast_Score=508, Evalue=1e-143,
Organism=Caenorhabditis elegans, GI25147430, Length=711, Percent_Identity=36.5682137834037, Blast_Score=436, Evalue=1e-122,
Organism=Drosophila melanogaster, GI20129985, Length=730, Percent_Identity=35.8904109589041, Blast_Score=454, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYAL_BACSU (P37512)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S66006
- RefSeq:   NP_391962.1
- ProteinModelPortal:   P37512
- EnsemblBacteria:   EBBACT00000001422
- GeneID:   937904
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40820
- NMPDR:   fig|224308.1.peg.4088
- GenoList:   BSU40820
- GeneTree:   EBGT00050000002118
- HOGENOM:   HBG756603
- OMA:   FYAGTYF
- ProtClustDB:   CLSK888208
- BioCyc:   BSUB:BSU40820-MONOMER
- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335
- Gene3D:   G3DSA:1.50.10.10
- Gene3D:   G3DSA:3.40.30.10

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76; SSF48208 Glyco_trans_6hp; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 78756; Mature: 78625

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNKSKPNRLINEKSPYLLQHAHNPVDWFPWGEEAFEKAKRENKPVLVSIGYSTCHWCHV
CCCCCCCCHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHH
MAHESFEDEEIARLLNERFVAIKVDREERPDVDSVYMRICQLMTGQGGWPLNVFITPDQK
HHHCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC
PFYAGTYFPKTSKFNRPGFVDVLEHLSETFANDREHVEDIAENAAKHLQTKTAAKTGEGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SESAIHRTFQQLASGFDTIYGGFGQAPKFPMPHMLMYLLRYDHNTGQENALYNVTKTLDS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
MANGGIYDHIGYGFARYSTDDEWLVPHFEKMLYDNALLLTAYTEAYQVTQNSRYKEICEQ
HHCCCCHHHHCCCEEECCCCCCCCHHHHHHHHHCCEEEEEEHHHHHHHHCCCHHHHHHHH
IITFIQREMTHEDGSFFSALDADTEGEEGKYYVWSKEEILKTLGDDLGTLYCQVYDITEE
HHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEEEEEEEECCC
GNFEGKNIPNLIHTKREQIKEDAGLTEKELSLKLEDARQQLLKTREERTYPHVDDKVLTS
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHCCCCCCCCHHHHH
WNALMIAGLAKAAKVYQEPKYLSLAKDAITFIENKLIIDGRVMVRYRDGEVKNKGFIDDY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEECCEEEEEEECCCCCCCCCHHHH
AFLLWAYLDLYEASFDLSYLQKAKKLTDDMISLFWDEEHGGFYFTGHDAEALIVREKEVY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCEEEEEEHHHH
DGAVPSGNSVAAVQLLRLGQVTGDLSLIEKAETMFSVFKPDIEAYPSGHAFFMQSVLRHL
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHH
MPKKEIVIFGSADDPARKQIIAELQKAFKPNDSILVAEQPEQCKDIAPFAADYRIIDGKT
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCEEEECCCE
TVYICENFACQQPTTNIEEAIHTLISSRD
EEEEECCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
PNKSKPNRLINEKSPYLLQHAHNPVDWFPWGEEAFEKAKRENKPVLVSIGYSTCHWCHV
CCCCCCCHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHH
MAHESFEDEEIARLLNERFVAIKVDREERPDVDSVYMRICQLMTGQGGWPLNVFITPDQK
HHHCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC
PFYAGTYFPKTSKFNRPGFVDVLEHLSETFANDREHVEDIAENAAKHLQTKTAAKTGEGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SESAIHRTFQQLASGFDTIYGGFGQAPKFPMPHMLMYLLRYDHNTGQENALYNVTKTLDS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
MANGGIYDHIGYGFARYSTDDEWLVPHFEKMLYDNALLLTAYTEAYQVTQNSRYKEICEQ
HHCCCCHHHHCCCEEECCCCCCCCHHHHHHHHHCCEEEEEEHHHHHHHHCCCHHHHHHHH
IITFIQREMTHEDGSFFSALDADTEGEEGKYYVWSKEEILKTLGDDLGTLYCQVYDITEE
HHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEEEEEEEECCC
GNFEGKNIPNLIHTKREQIKEDAGLTEKELSLKLEDARQQLLKTREERTYPHVDDKVLTS
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHCCCCCCCCHHHHH
WNALMIAGLAKAAKVYQEPKYLSLAKDAITFIENKLIIDGRVMVRYRDGEVKNKGFIDDY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEECCEEEEEEECCCCCCCCCHHHH
AFLLWAYLDLYEASFDLSYLQKAKKLTDDMISLFWDEEHGGFYFTGHDAEALIVREKEVY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCEEEEEEHHHH
DGAVPSGNSVAAVQLLRLGQVTGDLSLIEKAETMFSVFKPDIEAYPSGHAFFMQSVLRHL
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHH
MPKKEIVIFGSADDPARKQIIAELQKAFKPNDSILVAEQPEQCKDIAPFAADYRIIDGKT
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCEEEECCCE
TVYICENFACQQPTTNIEEAIHTLISSRD
EEEEECCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377