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The map label for this gene is yyaN

Identifier: 16081132

GI number: 16081132

Start: 4189796

End: 4190212

Strand: Direct

Name: yyaN

Synonym: BSU40800

Alternate gene names: 16081132

Gene position: 4189796-4190212 (Clockwise)

Preceding gene: 16081131

Following gene: 16081133

Centisome position: 99.39

GC content: 33.33

Gene sequence:

>417_bases
ATGTTGTTGTATTCCATTAGTAAAGCTGCTGAGAAGACTAGTATTAGTTCGTATACATTAAGATATTACGAAAAGATTGG
GTTACTTCCACCACCAAAACGAAAAAACAGTGGAAGGCGTTTTTATACGGAGACTGATATTCAGTTCATGTTATTCCTGA
AAAGTTTAAAGGAAACAGGTATGTCTTTGGAGGATATTAATGAGTTTGTCAAAGACGGATGCATTTTGGAAAAAATCAAT
TCGGATGTTAAATCGGCACAACTCTCCCCATCTATAAATAAACGTATTGAGATTTTAACCAAGCACTTAGAGAAAATGGA
AATTAAAAAAAGGGAGCTGGAAGAAGTGATTTCTACTACAAAAGGAAAACTGGATACATATTATTCAATTTTGAAAGAGG
AAGTGGAAAACAAATGA

Upstream 100 bases:

>100_bases
AAACCTGTAATCCGTAACCACGCGGTAGCAGGTTTTTTTATTTGCTTGACTTAGAGTTAACTCTAAATTGTAAACTAACT
TTAATTAAATGAGAGGGATG

Downstream 100 bases:

>100_bases
AACATTTAAATATATACATAATGTTACTTGGCTTCTCTATTTTCACGGGAGCTACTTTTAATCTTGCAAAATATACAGTT
GGATATTTTTCTCCATCGTC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLLYSISKAAEKTSISSYTLRYYEKIGLLPPPKRKNSGRRFYTETDIQFMLFLKSLKETGMSLEDINEFVKDGCILEKIN
SDVKSAQLSPSINKRIEILTKHLEKMEIKKRELEEVISTTKGKLDTYYSILKEEVENK

Sequences:

>Translated_138_residues
MLLYSISKAAEKTSISSYTLRYYEKIGLLPPPKRKNSGRRFYTETDIQFMLFLKSLKETGMSLEDINEFVKDGCILEKIN
SDVKSAQLSPSINKRIEILTKHLEKMEIKKRELEEVISTTKGKLDTYYSILKEEVENK
>Mature_138_residues
MLLYSISKAAEKTSISSYTLRYYEKIGLLPPPKRKNSGRRFYTETDIQFMLFLKSLKETGMSLEDINEFVKDGCILEKIN
SDVKSAQLSPSINKRIEILTKHLEKMEIKKRELEEVISTTKGKLDTYYSILKEEVENK

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYAN_BACSU (P37510)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S66004
- RefSeq:   NP_391960.1
- ProteinModelPortal:   P37510
- SMR:   P37510
- EnsemblBacteria:   EBBACT00000002014
- GeneID:   937892
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40800
- NMPDR:   fig|224308.1.peg.4086
- GenoList:   BSU40800
- GeneTree:   EBGT00070000032086
- HOGENOM:   HBG710951
- OMA:   KDGCILE
- ProtClustDB:   CLSK219211
- BioCyc:   BSUB:BSU40800-MONOMER
- InterPro:   IPR009061
- InterPro:   IPR000551
- PRINTS:   PR00040
- SMART:   SM00422

Pfam domain/function: PF00376 MerR; SSF46955 Putativ_DNA_bind

EC number: NA

Molecular weight: Translated: 16049; Mature: 16049

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00552 HTH_MERR_1; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLYSISKAAEKTSISSYTLRYYEKIGLLPPPKRKNSGRRFYTETDIQFMLFLKSLKETG
CCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHC
MSLEDINEFVKDGCILEKINSDVKSAQLSPSINKRIEILTKHLEKMEIKKRELEEVISTT
CCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGKLDTYYSILKEEVENK
CCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLYSISKAAEKTSISSYTLRYYEKIGLLPPPKRKNSGRRFYTETDIQFMLFLKSLKETG
CCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHC
MSLEDINEFVKDGCILEKINSDVKSAQLSPSINKRIEILTKHLEKMEIKKRELEEVISTT
CCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGKLDTYYSILKEEVENK
CCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377