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The map label for this gene is yyaP

Identifier: 16081128

GI number: 16081128

Start: 4186608

End: 4187174

Strand: Direct

Name: yyaP

Synonym: BSU40760

Alternate gene names: 16081128

Gene position: 4186608-4187174 (Clockwise)

Preceding gene: 16081127

Following gene: 16081131

Centisome position: 99.31

GC content: 30.69

Gene sequence:

>567_bases
ATGACAAATAACTTAAAACAGAGAAGAATCATTTTAGATTTAGCAGTTACTTTAGATGGTTTTATTGAAGGGAAAAATGG
AGAAGTTGATTGGTGTATTATGGACCCTGATATGGGGTTTACTGATTTTTTAAATCAAATTGATACTATTTTATATGGTA
GAAAAAGCTTCGATTTATGGGGACAATACATTCCAAAAAATGAAGACCCTGATACAGAAAAGGAACTTTGGAAATTGGTT
CATAGTAAAAAGAAATATGTTTTTTCCAGAACACAAAATGAGATTGATAATCAAGCCATATTTATAAATGATAATATTCT
TGAAGAAGTAAATAAATTGAAGAAAAATCCTGGTAAAGACATCTGGCTATATGGTGGAGCGAGTCTCATTACAACTTTTA
TAAATTTGGGGCTTGTTGATGAATTTAGATTATCTATTCACCCTGTTGTTTTGGGAGAAGGAAAACCGTTGTTTATTGAT
GTAAAACAGAGGATAAATTTAAAAATGGTGAATACAAGAACATTTTCCTCTGGCGTTGTGCAAATCGTTTATCATTGGAA
TGGCTAA

Upstream 100 bases:

>100_bases
ATACTGTTCTTCACTCTGTCCACAAACGCAACTTAGTTCATCTGGTGCGAGAGTGGGAGAAGAATTTCAACCAACTTCTT
ATGTAAAAGGATGAATAGTT

Downstream 100 bases:

>100_bases
CATTGTAAAGTAACACTCGACAGTAATCCTTCTTATTGAACTAAAGGGGAATCCATAAATAATGGGTTCCCCTTAATATA
CTATGGAATTATCAATATCA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTNNLKQRRIILDLAVTLDGFIEGKNGEVDWCIMDPDMGFTDFLNQIDTILYGRKSFDLWGQYIPKNEDPDTEKELWKLV
HSKKKYVFSRTQNEIDNQAIFINDNILEEVNKLKKNPGKDIWLYGGASLITTFINLGLVDEFRLSIHPVVLGEGKPLFID
VKQRINLKMVNTRTFSSGVVQIVYHWNG

Sequences:

>Translated_188_residues
MTNNLKQRRIILDLAVTLDGFIEGKNGEVDWCIMDPDMGFTDFLNQIDTILYGRKSFDLWGQYIPKNEDPDTEKELWKLV
HSKKKYVFSRTQNEIDNQAIFINDNILEEVNKLKKNPGKDIWLYGGASLITTFINLGLVDEFRLSIHPVVLGEGKPLFID
VKQRINLKMVNTRTFSSGVVQIVYHWNG
>Mature_187_residues
TNNLKQRRIILDLAVTLDGFIEGKNGEVDWCIMDPDMGFTDFLNQIDTILYGRKSFDLWGQYIPKNEDPDTEKELWKLVH
SKKKYVFSRTQNEIDNQAIFINDNILEEVNKLKKNPGKDIWLYGGASLITTFINLGLVDEFRLSIHPVVLGEGKPLFIDV
KQRINLKMVNTRTFSSGVVQIVYHWNG

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywjB

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYAP_BACSU (P37508)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S66001
- RefSeq:   NP_391956.1
- PDB:   2GD9
- PDBsum:   2GD9
- ProteinModelPortal:   P37508
- SMR:   P37508
- EnsemblBacteria:   EBBACT00000002219
- GeneID:   937903
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40760
- NMPDR:   fig|224308.1.peg.4082
- GenoList:   BSU40760
- GeneTree:   EBGT00050000002548
- HOGENOM:   HBG697409
- OMA:   WLYGGAS
- ProtClustDB:   CLSK806735
- BioCyc:   BSUB:BSU40760-MONOMER
- InterPro:   IPR002734

Pfam domain/function: PF01872 RibD_C

EC number: NA

Molecular weight: Translated: 21737; Mature: 21606

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x138fc3d8)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNLKQRRIILDLAVTLDGFIEGKNGEVDWCIMDPDMGFTDFLNQIDTILYGRKSFDLW
CCCCCCHHEEEEEEEEEHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHH
GQYIPKNEDPDTEKELWKLVHSKKKYVFSRTQNEIDNQAIFINDNILEEVNKLKKNPGKD
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCE
IWLYGGASLITTFINLGLVDEFRLSIHPVVLGEGKPLFIDVKQRINLKMVNTRTFSSGVV
EEEECCHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCEE
QIVYHWNG
EEEEEECH
>Mature Secondary Structure 
TNNLKQRRIILDLAVTLDGFIEGKNGEVDWCIMDPDMGFTDFLNQIDTILYGRKSFDLW
CCCCCHHEEEEEEEEEHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHH
GQYIPKNEDPDTEKELWKLVHSKKKYVFSRTQNEIDNQAIFINDNILEEVNKLKKNPGKD
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCE
IWLYGGASLITTFINLGLVDEFRLSIHPVVLGEGKPLFIDVKQRINLKMVNTRTFSSGVV
EEEECCHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCEE
QIVYHWNG
EEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377