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The map label for this gene is yycD

Identifier: 16081097

GI number: 16081097

Start: 4159005

End: 4159205

Strand: Direct

Name: yycD

Synonym: BSU40450

Alternate gene names: 16081097

Gene position: 4159005-4159205 (Clockwise)

Preceding gene: 16081087

Following gene: 16081099

Centisome position: 98.66

GC content: 40.3

Gene sequence:

>201_bases
ATGATAAAGAAATATGCGATTACACCTAATGTTGATGCGGACGGCTGGTTTATTGAGGTGGAGAATGTAGCGCCGACAGC
TTTGTATACGTCTAAAGACGCCGCTATTGAAAAGGCCAAACAGGTGGCTAAGGAAAACAGTCCGTCTAAGCTTGTAATTT
ATGACCAGTTTAAAAATGTGGAAGAAGAACACTCATTTTAA

Upstream 100 bases:

>100_bases
AAAATTGTCTGTTTCCTGTTTTTTTCAGTTAGCAGATTGGATCGTTTCGGACAGTAACAAGGCGGGAAAAATGCAATAAA
ACATAAGGGAGGAATGAAAG

Downstream 100 bases:

>100_bases
TGAATGAAAGCCTTCGCTGCAGCGAGGGTTTTTTAGCGGTTATCGGTTTATTTCATCCATTGGATGCCTATGTGCATCAT
CAAATCTGCCGCTTTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MIKKYAITPNVDADGWFIEVENVAPTALYTSKDAAIEKAKQVAKENSPSKLVIYDQFKNVEEEHSF

Sequences:

>Translated_66_residues
MIKKYAITPNVDADGWFIEVENVAPTALYTSKDAAIEKAKQVAKENSPSKLVIYDQFKNVEEEHSF
>Mature_66_residues
MIKKYAITPNVDADGWFIEVENVAPTALYTSKDAAIEKAKQVAKENSPSKLVIYDQFKNVEEEHSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYCD_BACSU (P37480)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65971
- RefSeq:   NP_391925.1
- EnsemblBacteria:   EBBACT00000000492
- GeneID:   937781
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40450
- NMPDR:   fig|224308.1.peg.4051
- GenoList:   BSU40450
- GeneTree:   EBGT00050000001742
- HOGENOM:   HBG338521
- OMA:   PSKLVIY
- ProtClustDB:   CLSK888194
- BioCyc:   BSUB:BSU40450-MONOMER
- InterPro:   IPR020086
- ProDom:   PD054650

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7461; Mature: 7461

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKYAITPNVDADGWFIEVENVAPTALYTSKDAAIEKAKQVAKENSPSKLVIYDQFKNV
CCCEECCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCC
EEEHSF
CCCCCC
>Mature Secondary Structure
MIKKYAITPNVDADGWFIEVENVAPTALYTSKDAAIEKAKQVAKENSPSKLVIYDQFKNV
CCCEECCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCC
EEEHSF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377