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The map label for this gene is yycO

Identifier: 16081080

GI number: 16081080

Start: 4138800

End: 4139537

Strand: Reverse

Name: yycO

Synonym: BSU40280

Alternate gene names: 16081080

Gene position: 4139537-4138800 (Counterclockwise)

Preceding gene: 16081081

Following gene: 255767870

Centisome position: 98.2

GC content: 49.73

Gene sequence:

>738_bases
ATGAAGTTGAAGAAACGAGTGTCGATGTTTTTGGTAGCGCTCACAATGTGCGGCGGCCTGTTTGTTACTCCCGCCAAAGC
CGTAAAGACCACAAATTATGCTGAAGAAATCGCCGCACTGCAGCCAGGCACGACACCGGAAGAAATCATGAAATCTGCCA
GCCAGATTGCCAAACAGCAGCACGTAAAGCAGGACGTTATCCTAAAACAGTTCTATAAGGAGATCACGGCTGATAAAGCA
GAGGGGGACCGGCTCGCCAAGGAAAGCGGCATGTCTATCATGGGCGGCTCGTCCGGCACGAAAAAACTCCCGACAAGCGC
GAAAGGCAATATCTATTACACGAACTCCTACACAGCCTACTACAATCACGGCCATGTCGGCATGTACTCCGCCGCTGACA
AAATTGTTGAATCTGTCCCGAGCGACGGCGTCAGGCAGATCGCGTATAATGCCAGAGACGTGGAAGACAACTCCATTGTG
CAAACCGTCAGCGTATCCTCATCTCAAAAAACAGCTGCTGCCGACTGGGCGGTATCAAAAGTCGGCGACCCATACTCATT
TAACTTCGTCAATAACAGAAATACCGGCCATGACGGCGCCAAAAACTGTTCAAAGCTCCTATGGTCTGCCTTTTTGCTGA
AAGCAGGGATTGATATAGACAGCAACGGAGGCTTAGGCGTGTATCCGCGCGACATCACTAGTTCTTCTTATACGACAACC
ATTATGACCATTTACTAA

Upstream 100 bases:

>100_bases
TAAAAATTCTGTAAATAACCTAGTTACTTTCCTTATTTTCCTAATATAATGTGGGTGAGGAAATTACCTTTCCTACACTC
ACAAGAAAAGAGGAGATGTA

Downstream 100 bases:

>100_bases
GGAGAAGGCTATGAAAAAGTGGATGATTACCATCGCCATGCTGATTCTCGCAGGAATCGCACTATTTGTCTTCATTTCTC
CTCTCAAAAGCCATAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKLKKRVSMFLVALTMCGGLFVTPAKAVKTTNYAEEIAALQPGTTPEEIMKSASQIAKQQHVKQDVILKQFYKEITADKA
EGDRLAKESGMSIMGGSSGTKKLPTSAKGNIYYTNSYTAYYNHGHVGMYSAADKIVESVPSDGVRQIAYNARDVEDNSIV
QTVSVSSSQKTAAADWAVSKVGDPYSFNFVNNRNTGHDGAKNCSKLLWSAFLLKAGIDIDSNGGLGVYPRDITSSSYTTT
IMTIY

Sequences:

>Translated_245_residues
MKLKKRVSMFLVALTMCGGLFVTPAKAVKTTNYAEEIAALQPGTTPEEIMKSASQIAKQQHVKQDVILKQFYKEITADKA
EGDRLAKESGMSIMGGSSGTKKLPTSAKGNIYYTNSYTAYYNHGHVGMYSAADKIVESVPSDGVRQIAYNARDVEDNSIV
QTVSVSSSQKTAAADWAVSKVGDPYSFNFVNNRNTGHDGAKNCSKLLWSAFLLKAGIDIDSNGGLGVYPRDITSSSYTTT
IMTIY
>Mature_245_residues
MKLKKRVSMFLVALTMCGGLFVTPAKAVKTTNYAEEIAALQPGTTPEEIMKSASQIAKQQHVKQDVILKQFYKEITADKA
EGDRLAKESGMSIMGGSSGTKKLPTSAKGNIYYTNSYTAYYNHGHVGMYSAADKIVESVPSDGVRQIAYNARDVEDNSIV
QTVSVSSSQKTAAADWAVSKVGDPYSFNFVNNRNTGHDGAKNCSKLLWSAFLLKAGIDIDSNGGLGVYPRDITSSSYTTT
IMTIY

Specific function: Unknown

COG id: COG3863

COG function: function code S; Uncharacterized distant relative of cell wall-associated hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYCO_BACSU (Q45607)

Other databases:

- EMBL:   D78193
- EMBL:   AL009126
- PIR:   C70090
- RefSeq:   NP_391908.1
- ProteinModelPortal:   Q45607
- EnsemblBacteria:   EBBACT00000000137
- GeneID:   937766
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40280
- NMPDR:   fig|224308.1.peg.4034
- GenoList:   BSU40280
- GeneTree:   EBGT00050000002236
- HOGENOM:   HBG338511
- OMA:   KNTGNTK
- ProtClustDB:   CLSK888186
- BioCyc:   BSUB:BSU40280-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26529; Mature: 26529

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKRVSMFLVALTMCGGLFVTPAKAVKTTNYAEEIAALQPGTTPEEIMKSASQIAKQQ
CCHHHHHHHHHHHHHHHCCEEECCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
HVKQDVILKQFYKEITADKAEGDRLAKESGMSIMGGSSGTKKLPTSAKGNIYYTNSYTAY
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEECCEEEE
YNHGHVGMYSAADKIVESVPSDGVRQIAYNARDVEDNSIVQTVSVSSSQKTAAADWAVSK
EECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
VGDPYSFNFVNNRNTGHDGAKNCSKLLWSAFLLKAGIDIDSNGGLGVYPRDITSSSYTTT
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
IMTIY
EEEEC
>Mature Secondary Structure
MKLKKRVSMFLVALTMCGGLFVTPAKAVKTTNYAEEIAALQPGTTPEEIMKSASQIAKQQ
CCHHHHHHHHHHHHHHHCCEEECCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
HVKQDVILKQFYKEITADKAEGDRLAKESGMSIMGGSSGTKKLPTSAKGNIYYTNSYTAY
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEECCEEEE
YNHGHVGMYSAADKIVESVPSDGVRQIAYNARDVEDNSIVQTVSVSSSQKTAAADWAVSK
EECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
VGDPYSFNFVNNRNTGHDGAKNCSKLLWSAFLLKAGIDIDSNGGLGVYPRDITSSSYTTT
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
IMTIY
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377