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The map label for this gene is yydB

Identifier: 16081074

GI number: 16081074

Start: 4132729

End: 4134174

Strand: Reverse

Name: yydB

Synonym: BSU40220

Alternate gene names: 16081074

Gene position: 4134174-4132729 (Counterclockwise)

Preceding gene: 16081075

Following gene: 16081073

Centisome position: 98.07

GC content: 28.77

Gene sequence:

>1446_bases
TTGAAGGTACGTTTTTTACAAATTTCTGATTTGCATTTTCAGTTTCAAAATTATGACACTATTGTAATGAGAGATAAATT
ATTAGATTTTATAGAAGTTTTAAGAAGAGAGTCAGATTTTGATTTTTTATTATTAACTGGAGATATAGCACACAAAGGTG
ATGTGTATAACGAAGATGTTAAAGAATATCTTAATGGAATTATTAAAAGTATGGGATTAAGTAAGAATAACGTACACTTA
GTGCCAGGAAATCACGATATATCTAGAGACATGACGAGGACACTTTTGATTGATAGTATTATGAAATCTCCTAACCCCTC
AGAAATGTTGGATAAACTAGATCAAAAAGCTACAAATATATTAGTGGAAGGTCAAAGGAAATTTTTCGATTTTTATGAAG
ATTTTATGGGTGTTAAATATCCGGAAGAAGATTTGCATTTTTTGTATCAATCGGAGAAGTATAATGTTTTATCAATAAAT
ACATGTCTGTTATCAGATAAAAAAGGTGAAGAAGGAACGTTATTAACTGCACAGATGAAATTATATAAAGCAATAAGGAA
GATGAACAAAGAGAAAAATAAGGGCAAGGTATTAAATATAGCTATTGGGCACCATACGTTAGGTTGTATTGAATCTTCCG
AAAGAGAATCAATAAAGGCACATTTTGATGATTACTTTATTGATCTATATTTGGCAGGACATGTACATGATTCTTCATTT
AATATTACTGCAAATACAAATGAAAATCCATTCTTAGAATTAGTAAGTGGAGCCATTATAAAGGATGAGTATGCTACTCC
AGAATTTATTTCGGTGGATGTGAATTTAGATAATGGCGAGACAGAAGTAACATACTACATTTGGAATACCGAATATAAAT
ACTGGTCAAAAAACAACCAAGGAGGAAGGAGACTACAGGAAGGGAAGTTAAATTATAAGATTAATAGATTAGAGAGCCTT
ATTGAAAAAGAAATAGAAGATAACGATGATAAAATTGATGAAGATGAGTTTAAGAGCTTTATTATAGATTTTCATGAGTA
TAGAGAAAGTTATAAAACATTTACTAGTAATTTTGATAATCAAATTGGTTTAGATAAAAAATTTTATGATATGAAAAGTG
GGGAAACTTTTAAACGGAAATTCGATAGTTATTCTGAGTATTTTGGTGTGATAAACCATATAATGGATTCCACTTCGTAT
GTAAGTGCTGATAAAAAGGAATTGATTGCTGAGACGATAGTAGACAAATATCTAGAGTTTCATAATCAATATAATAATGG
AGATGAGATATTTGTAAAAATTGTTAATGAGATTTATCTAGAATGTCATTCAGTTTTACCATATTCAAAGGCTTTAACGA
AAAAATACATTAAGATTTTAACATGTTGGTGCATTTATGAATGTGAGATTTTTAATGATAACAAAAGAAGTGTTAAGAAT
GATTGA

Upstream 100 bases:

>100_bases
TGGAAAGAGTCTTAATATATTAAAGAGTAAAGATGATATAGAATAAAAAGTTTTCTAGAAATATATAGGGGATAAATATA
CTTATGAGAGGATGTTTGTA

Downstream 100 bases:

>100_bases
TCTTAAAATTGAAACAGCTGAAAATATTCTCAAATACTCTTATGTTTTATTAGAAAATGAGTTTAAAAACATTCAAATTG
GAAATGATCTTATTCCTCTA

Product: phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKVRFLQISDLHFQFQNYDTIVMRDKLLDFIEVLRRESDFDFLLLTGDIAHKGDVYNEDVKEYLNGIIKSMGLSKNNVHL
VPGNHDISRDMTRTLLIDSIMKSPNPSEMLDKLDQKATNILVEGQRKFFDFYEDFMGVKYPEEDLHFLYQSEKYNVLSIN
TCLLSDKKGEEGTLLTAQMKLYKAIRKMNKEKNKGKVLNIAIGHHTLGCIESSERESIKAHFDDYFIDLYLAGHVHDSSF
NITANTNENPFLELVSGAIIKDEYATPEFISVDVNLDNGETEVTYYIWNTEYKYWSKNNQGGRRLQEGKLNYKINRLESL
IEKEIEDNDDKIDEDEFKSFIIDFHEYRESYKTFTSNFDNQIGLDKKFYDMKSGETFKRKFDSYSEYFGVINHIMDSTSY
VSADKKELIAETIVDKYLEFHNQYNNGDEIFVKIVNEIYLECHSVLPYSKALTKKYIKILTCWCIYECEIFNDNKRSVKN
D

Sequences:

>Translated_481_residues
MKVRFLQISDLHFQFQNYDTIVMRDKLLDFIEVLRRESDFDFLLLTGDIAHKGDVYNEDVKEYLNGIIKSMGLSKNNVHL
VPGNHDISRDMTRTLLIDSIMKSPNPSEMLDKLDQKATNILVEGQRKFFDFYEDFMGVKYPEEDLHFLYQSEKYNVLSIN
TCLLSDKKGEEGTLLTAQMKLYKAIRKMNKEKNKGKVLNIAIGHHTLGCIESSERESIKAHFDDYFIDLYLAGHVHDSSF
NITANTNENPFLELVSGAIIKDEYATPEFISVDVNLDNGETEVTYYIWNTEYKYWSKNNQGGRRLQEGKLNYKINRLESL
IEKEIEDNDDKIDEDEFKSFIIDFHEYRESYKTFTSNFDNQIGLDKKFYDMKSGETFKRKFDSYSEYFGVINHIMDSTSY
VSADKKELIAETIVDKYLEFHNQYNNGDEIFVKIVNEIYLECHSVLPYSKALTKKYIKILTCWCIYECEIFNDNKRSVKN
D
>Mature_481_residues
MKVRFLQISDLHFQFQNYDTIVMRDKLLDFIEVLRRESDFDFLLLTGDIAHKGDVYNEDVKEYLNGIIKSMGLSKNNVHL
VPGNHDISRDMTRTLLIDSIMKSPNPSEMLDKLDQKATNILVEGQRKFFDFYEDFMGVKYPEEDLHFLYQSEKYNVLSIN
TCLLSDKKGEEGTLLTAQMKLYKAIRKMNKEKNKGKVLNIAIGHHTLGCIESSERESIKAHFDDYFIDLYLAGHVHDSSF
NITANTNENPFLELVSGAIIKDEYATPEFISVDVNLDNGETEVTYYIWNTEYKYWSKNNQGGRRLQEGKLNYKINRLESL
IEKEIEDNDDKIDEDEFKSFIIDFHEYRESYKTFTSNFDNQIGLDKKFYDMKSGETFKRKFDSYSEYFGVINHIMDSTSY
VSADKKELIAETIVDKYLEFHNQYNNGDEIFVKIVNEIYLECHSVLPYSKALTKKYIKILTCWCIYECEIFNDNKRSVKN
D

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYDB_BACSU (Q45600)

Other databases:

- EMBL:   D78193
- EMBL:   AL009126
- PIR:   A70091
- RefSeq:   NP_391902.1
- ProteinModelPortal:   Q45600
- SMR:   Q45600
- EnsemblBacteria:   EBBACT00000000915
- GeneID:   937728
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40220
- NMPDR:   fig|224308.1.peg.4028
- GenoList:   BSU40220
- GeneTree:   EBGT00050000005565
- HOGENOM:   HBG349042
- OMA:   INNENAR
- ProtClustDB:   CLSK561420
- BioCyc:   BSUB:BSU40220-MONOMER
- InterPro:   IPR004843

Pfam domain/function: PF00149 Metallophos

EC number: NA

Molecular weight: Translated: 56461; Mature: 56461

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRFLQISDLHFQFQNYDTIVMRDKLLDFIEVLRRESDFDFLLLTGDIAHKGDVYNEDV
CEEEEEEEECEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHH
KEYLNGIIKSMGLSKNNVHLVPGNHDISRDMTRTLLIDSIMKSPNPSEMLDKLDQKATNI
HHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHE
LVEGQRKFFDFYEDFMGVKYPEEDLHFLYQSEKYNVLSINTCLLSDKKGEEGTLLTAQMK
EEECHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCEEEEEEEEECCCCCCCCCEEHHHHH
LYKAIRKMNKEKNKGKVLNIAIGHHTLGCIESSERESIKAHFDDYFIDLYLAGHVHDSSF
HHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHCCEEEEEEEEEEEECCCE
NITANTNENPFLELVSGAIIKDEYATPEFISVDVNLDNGETEVTYYIWNTEYKYWSKNNQ
EEEECCCCCHHHHHHCCCCEECCCCCCCEEEEEEEECCCCEEEEEEEEECEEEEECCCCC
GGRRLQEGKLNYKINRLESLIEKEIEDNDDKIDEDEFKSFIIDFHEYRESYKTFTSNFDN
CCCHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
QIGLDKKFYDMKSGETFKRKFDSYSEYFGVINHIMDSTSYVSADKKELIAETIVDKYLEF
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
HNQYNNGDEIFVKIVNEIYLECHSVLPYSKALTKKYIKILTCWCIYECEIFNDNKRSVKN
HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCC
D
C
>Mature Secondary Structure
MKVRFLQISDLHFQFQNYDTIVMRDKLLDFIEVLRRESDFDFLLLTGDIAHKGDVYNEDV
CEEEEEEEECEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHH
KEYLNGIIKSMGLSKNNVHLVPGNHDISRDMTRTLLIDSIMKSPNPSEMLDKLDQKATNI
HHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHE
LVEGQRKFFDFYEDFMGVKYPEEDLHFLYQSEKYNVLSINTCLLSDKKGEEGTLLTAQMK
EEECHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCEEEEEEEEECCCCCCCCCEEHHHHH
LYKAIRKMNKEKNKGKVLNIAIGHHTLGCIESSERESIKAHFDDYFIDLYLAGHVHDSSF
HHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHCCEEEEEEEEEEEECCCE
NITANTNENPFLELVSGAIIKDEYATPEFISVDVNLDNGETEVTYYIWNTEYKYWSKNNQ
EEEECCCCCHHHHHHCCCCEECCCCCCCEEEEEEEECCCCEEEEEEEEECEEEEECCCCC
GGRRLQEGKLNYKINRLESLIEKEIEDNDDKIDEDEFKSFIIDFHEYRESYKTFTSNFDN
CCCHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
QIGLDKKFYDMKSGETFKRKFDSYSEYFGVINHIMDSTSYVSADKKELIAETIVDKYLEF
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
HNQYNNGDEIFVKIVNEIYLECHSVLPYSKALTKKYIKILTCWCIYECEIFNDNKRSVKN
HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377