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The map label for this gene is yxcD

Identifier: 16081031

GI number: 16081031

Start: 4087456

End: 4087764

Strand: Direct

Name: yxcD

Synonym: BSU39800

Alternate gene names: 16081031

Gene position: 4087456-4087764 (Clockwise)

Preceding gene: 16081030

Following gene: 16081032

Centisome position: 96.96

GC content: 38.83

Gene sequence:

>309_bases
ATGAGATTAATATTAAATGAGCAAGAAATTGTAGACGGAATTTGCGTGTATATTTCCAATGAAGAAGATATCTACCCTGA
AGACGTTGAAGTAAAAGAACTATCGTACAACAAGCGTACAGGGTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGC
AGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTC
GTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAA

Upstream 100 bases:

>100_bases
GATCGTTGATATCATCGCTTTGATTATTATTTTAATCATTGTCATCGCATTGATTCGCGCATTTAAAGCACCGAAGACGT
ACAGAAGGAGATTTTAGGCA

Downstream 100 bases:

>100_bases
AAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTC
CTAAACTCAGCGGATCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MRLILNEQEIVDGICVYISNEEDIYPEDVEVKELSYNKRTGFFAEATFGLHHKQLMSDDISEGIIQFLEEYHNFNPDVTV
VELQFDKKKGFSALVFVNEAEE

Sequences:

>Translated_102_residues
MRLILNEQEIVDGICVYISNEEDIYPEDVEVKELSYNKRTGFFAEATFGLHHKQLMSDDISEGIIQFLEEYHNFNPDVTV
VELQFDKKKGFSALVFVNEAEE
>Mature_102_residues
MRLILNEQEIVDGICVYISNEEDIYPEDVEVKELSYNKRTGFFAEATFGLHHKQLMSDDISEGIIQFLEEYHNFNPDVTV
VELQFDKKKGFSALVFVNEAEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXCD_BACSU (P46334)

Other databases:

- EMBL:   AB005554
- EMBL:   AL009126
- PIR:   E70073
- RefSeq:   NP_391859.1
- EnsemblBacteria:   EBBACT00000000595
- GeneID:   937638
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39800
- NMPDR:   fig|224308.1.peg.3985
- GenoList:   BSU39800
- ProtClustDB:   CLSK2752575
- BioCyc:   BSUB:BSU39800-MONOMER
- InterPro:   IPR020516
- ProDom:   PD068665

Pfam domain/function: PF10850 DUF2653

EC number: NA

Molecular weight: Translated: 11851; Mature: 11851

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILNEQEIVDGICVYISNEEDIYPEDVEVKELSYNKRTGFFAEATFGLHHKQLMSDDI
CEEEECHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHCCH
SEGIIQFLEEYHNFNPDVTVVELQFDKKKGFSALVFVNEAEE
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCC
>Mature Secondary Structure
MRLILNEQEIVDGICVYISNEEDIYPEDVEVKELSYNKRTGFFAEATFGLHHKQLMSDDI
CEEEECHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHCCH
SEGIIQFLEEYHNFNPDVTVVELQFDKKKGFSALVFVNEAEE
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377