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The map label for this gene is yxeF

Identifier: 16081008

GI number: 16081008

Start: 4065074

End: 4065508

Strand: Reverse

Name: yxeF

Synonym: BSU39570

Alternate gene names: 16081008

Gene position: 4065508-4065074 (Counterclockwise)

Preceding gene: 255767846

Following gene: 16081007

Centisome position: 96.44

GC content: 47.13

Gene sequence:

>435_bases
ATGGTGATCCCCTTGAGAAACAAATATGGCATTTTGTTTTTAATTGCTGTATGCATCATGGTATCGGGCTGCCAGCAGCA
AAAAGAAGAGACGCCGTTTTATTACGGAACGTGGGATGAGGGGCGTGCCCCCGGGCCAACGGACGGTGTGAAATCAGCAA
CAGTCACATTTACCGAAGACGAGGTTGTGGAAACGGAAGTGATGGAAGGAAGAGGAGAGGTACAGCTGCCTTTTATGGCA
TACAAGGTGATTTCCCAAAGCACTGACGGGTCTATCGAGATTCAGTACCTCGGCCCTTATTATCCGCTCAAAAGCACGCT
GAAAAGAGGAGAAAACGGGACATTGATATGGGAGCAAAATGGACAGAGAAAAACGATGACAAGAATCGAATCAAAGACCG
GCAGGGAGGAGAAAGATGAGAAATCAAAAAGCTGA

Upstream 100 bases:

>100_bases
ATAAGGGTTCATGTGATCAGTCTCCTTGTGGGTGAATTCCTTATAACTTATGTAGTCATTGGCACAGTGGCACGGCATTC
GCCCAAAAAAGGAGGAAAGA

Downstream 100 bases:

>100_bases
AAGACTGGTGGCAGCGGGGCTTGTTTTACATATCATTCAATGGATATTTATATTATGGGCTTTTCTCAAAGTCAAACATT
TATTTAGTGACTATACGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVIPLRNKYGILFLIAVCIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVMEGRGEVQLPFMA
YKVISQSTDGSIEIQYLGPYYPLKSTLKRGENGTLIWEQNGQRKTMTRIESKTGREEKDEKSKS

Sequences:

>Translated_144_residues
MVIPLRNKYGILFLIAVCIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVMEGRGEVQLPFMA
YKVISQSTDGSIEIQYLGPYYPLKSTLKRGENGTLIWEQNGQRKTMTRIESKTGREEKDEKSKS
>Mature_144_residues
MVIPLRNKYGILFLIAVCIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVMEGRGEVQLPFMA
YKVISQSTDGSIEIQYLGPYYPLKSTLKRGENGTLIWEQNGQRKTMTRIESKTGREEKDEKSKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXEF_BACSU (P54945)

Other databases:

- EMBL:   D45912
- EMBL:   AL009126
- PIR:   H70074
- RefSeq:   NP_391836.1
- PDB:   2JOZ
- PDBsum:   2JOZ
- ProteinModelPortal:   P54945
- SMR:   P54945
- EnsemblBacteria:   EBBACT00000000736
- GeneID:   937562
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39570
- NMPDR:   fig|224308.1.peg.3962
- GenoList:   BSU39570
- GeneTree:   EBGT00050000002814
- HOGENOM:   HBG338486
- OMA:   FYYGTWD
- ProtClustDB:   CLSK888163
- BioCyc:   BSUB:BSU39570-MONOMER
- GO:   GO:0005488
- InterPro:   IPR012674
- InterPro:   IPR021664
- Gene3D:   G3DSA:2.40.128.20

Pfam domain/function: PF11631 DUF3255

EC number: NA

Molecular weight: Translated: 16272; Mature: 16272

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIPLRNKYGILFLIAVCIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTED
CEECCCCCCCHHHHHHHHHHHHCHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEECCC
EVVETEVMEGRGEVQLPFMAYKVISQSTDGSIEIQYLGPYYPLKSTLKRGENGTLIWEQN
HHHHHHHHCCCCCEECHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEECCC
GQRKTMTRIESKTGREEKDEKSKS
CCHHHHHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure
MVIPLRNKYGILFLIAVCIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTED
CEECCCCCCCHHHHHHHHHHHHCHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEECCC
EVVETEVMEGRGEVQLPFMAYKVISQSTDGSIEIQYLGPYYPLKSTLKRGENGTLIWEQN
HHHHHHHHCCCCCEECHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEECCC
GQRKTMTRIESKTGREEKDEKSKS
CCHHHHHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377