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The map label for this gene is yxjI

Identifier: 16080945

GI number: 16080945

Start: 3997221

End: 3997709

Strand: Direct

Name: yxjI

Synonym: BSU38940

Alternate gene names: 16080945

Gene position: 3997221-3997709 (Clockwise)

Preceding gene: 16080944

Following gene: 255767819

Centisome position: 94.82

GC content: 39.67

Gene sequence:

>489_bases
ATGATCGAGTTATTTATGAAACAAAAAATGTTCTCATTTAAAGATGCATTTCACATTTATGACCGGGATGAACAAGAAAC
ATTCAAGGTGGAGGGGCGTTTTTTCTCGTTAGGAGACTCATTACAAATGACAGACTCATCTGGGAAAACGCTCGTTTCCA
TAGAACAAAAACTAATGTCTTTATTGCCGCGCTATGAGATTTCAATTGGCGGGAAAACAGTTTGTGAGGTAACGAAGAAA
GTAACGTTTTCCAAACCGAAATTTGTGATTTCCGGGCTTAACTGGGAAATAGATGGTGATTTATGGAGGGATGAATTCCA
ACTGACGGACGGGGAAAATGTCCGGATGTCAGTGAGCAAAAAGTGGCTCAGTTGGGGTGATTCCTATCACTTGCAGATTG
CATACGAGGAAGATGTTCTGATTTGCACTGCCATCGCTATCGTGCTTGATATGGTTTTATATAACGATGAAGATGAAAGT
ATTTTCTAA

Upstream 100 bases:

>100_bases
AATCACGCAGCCTTTTAAAATTGTTTTGATTTAGAGCCTGAAACCTTTTCGCCACCTATCCGTAATTTCATACAAGGCAA
ACCCAAAGGAGACTTCAGCA

Downstream 100 bases:

>100_bases
AAAGCATTGACAATTGATCCAAAAGTAATAATATTAAGATAATTGAAATCTGAATATGAAGTTGTACCTTATCAAGAGAG
GTGGAGGGACTGGCCCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MIELFMKQKMFSFKDAFHIYDRDEQETFKVEGRFFSLGDSLQMTDSSGKTLVSIEQKLMSLLPRYEISIGGKTVCEVTKK
VTFSKPKFVISGLNWEIDGDLWRDEFQLTDGENVRMSVSKKWLSWGDSYHLQIAYEEDVLICTAIAIVLDMVLYNDEDES
IF

Sequences:

>Translated_162_residues
MIELFMKQKMFSFKDAFHIYDRDEQETFKVEGRFFSLGDSLQMTDSSGKTLVSIEQKLMSLLPRYEISIGGKTVCEVTKK
VTFSKPKFVISGLNWEIDGDLWRDEFQLTDGENVRMSVSKKWLSWGDSYHLQIAYEEDVLICTAIAIVLDMVLYNDEDES
IF
>Mature_162_residues
MIELFMKQKMFSFKDAFHIYDRDEQETFKVEGRFFSLGDSLQMTDSSGKTLVSIEQKLMSLLPRYEISIGGKTVCEVTKK
VTFSKPKFVISGLNWEIDGDLWRDEFQLTDGENVRMSVSKKWLSWGDSYHLQIAYEEDVLICTAIAIVLDMVLYNDEDES
IF

Specific function: Unknown

COG id: COG4894

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXJI_BACSU (P94352)

Other databases:

- EMBL:   D83026
- EMBL:   AL009126
- PIR:   G70079
- RefSeq:   NP_391773.1
- ProteinModelPortal:   P94352
- EnsemblBacteria:   EBBACT00000000726
- GeneID:   937439
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38940
- NMPDR:   fig|224308.1.peg.3899
- GenoList:   BSU38940
- GeneTree:   EBGT00050000001143
- HOGENOM:   HBG338468
- OMA:   FSLGGKF
- ProtClustDB:   CLSK888131
- BioCyc:   BSUB:BSU38940-MONOMER
- InterPro:   IPR007612
- InterPro:   IPR000007

Pfam domain/function: PF04525 DUF567; SSF54518 Tubby_C

EC number: NA

Molecular weight: Translated: 18827; Mature: 18827

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELFMKQKMFSFKDAFHIYDRDEQETFKVEGRFFSLGDSLQMTDSSGKTLVSIEQKLMS
CCHHHHHHHHHHHHHHEEECCCCCCCEEEECCEEEECCCCEEEECCCCCEEHHHHHHHHH
LLPRYEISIGGKTVCEVTKKVTFSKPKFVISGLNWEIDGDLWRDEFQLTDGENVRMSVSK
HCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCEEEECCCCCEEEEEEH
KWLSWGDSYHLQIAYEEDVLICTAIAIVLDMVLYNDEDESIF
HHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIELFMKQKMFSFKDAFHIYDRDEQETFKVEGRFFSLGDSLQMTDSSGKTLVSIEQKLMS
CCHHHHHHHHHHHHHHEEECCCCCCCEEEECCEEEECCCCEEEECCCCCEEHHHHHHHHH
LLPRYEISIGGKTVCEVTKKVTFSKPKFVISGLNWEIDGDLWRDEFQLTDGENVRMSVSK
HCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCEEEECCCCCEEEEEEH
KWLSWGDSYHLQIAYEEDVLICTAIAIVLDMVLYNDEDESIF
HHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377