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The map label for this gene is yxlJ

Identifier: 16080913

GI number: 16080913

Start: 3964278

End: 3964868

Strand: Reverse

Name: yxlJ

Synonym: BSU38620

Alternate gene names: 16080913

Gene position: 3964868-3964278 (Counterclockwise)

Preceding gene: 255767818

Following gene: 16080912

Centisome position: 94.05

GC content: 54.31

Gene sequence:

>591_bases
GTGACGAGAGAAAAAAATCCGCTGCCCATCACGTTTTATCAAAAAACCGCTCTTGAGCTTGCCCCATCGCTTCTGGGCTG
CCTTCTTGTAAAAGAAACAGACGAAGGCACAGCGTCAGGCTATATTGTGGAAACAGAGGCCTATATGGGGGCTGGAGACA
GAGCGGCCCACAGCTTTAACAACCGCCGGACGAAGCGGACTGAGATCATGTTTGCAGAAGCTGGGCGGGTATATACATAC
GTGATGCACACCCATACATTGCTGAATGTCGTTGCGGCGGAAGAGGATGTCCCGCAAGCAGTATTAATCAGGGCGATTGA
GCCGCATGAAGGCCAGCTGTTAATGGAGGAGAGAAGGCCGGGCAGGAGTCCGAGGGAATGGACAAACGGACCAGGAAAGC
TGACGAAAGCGCTTGGCGTCACGATGAATGACTACGGACGCTGGATCACGGAACAGCCGCTTTACATCGAAAGCGGGTAC
ACACCGGAAGCAATTTCAACCGGCCCGCGCATCGGCATTGACAACAGCGGGGAGGCACGCGATTATCCATGGCGTTTCTG
GGTGACGGGAAACAGGTACGTGTCGCGTTAG

Upstream 100 bases:

>100_bases
CAATATTCCCTGAATGGAAAGATTTTAAAACAGCCGTTTTTTTTGATCTGCTTCGGGAATGGTACAATGTACAAAAATCG
GTAAAAGGAGAGGTCGATTC

Downstream 100 bases:

>100_bases
CATGTTTAAGGAAGAGGCAATCAGGGGAATGGTTGAGAAAAAAGAAGGGAGAATCGGAGCTTTGAAAAAGATGATCAAAA
CCGTTATCAAATGGGCGCCG

Product: 3-methyladenine DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTREKNPLPITFYQKTALELAPSLLGCLLVKETDEGTASGYIVETEAYMGAGDRAAHSFNNRRTKRTEIMFAEAGRVYTY
VMHTHTLLNVVAAEEDVPQAVLIRAIEPHEGQLLMEERRPGRSPREWTNGPGKLTKALGVTMNDYGRWITEQPLYIESGY
TPEAISTGPRIGIDNSGEARDYPWRFWVTGNRYVSR

Sequences:

>Translated_196_residues
MTREKNPLPITFYQKTALELAPSLLGCLLVKETDEGTASGYIVETEAYMGAGDRAAHSFNNRRTKRTEIMFAEAGRVYTY
VMHTHTLLNVVAAEEDVPQAVLIRAIEPHEGQLLMEERRPGRSPREWTNGPGKLTKALGVTMNDYGRWITEQPLYIESGY
TPEAISTGPRIGIDNSGEARDYPWRFWVTGNRYVSR
>Mature_195_residues
TREKNPLPITFYQKTALELAPSLLGCLLVKETDEGTASGYIVETEAYMGAGDRAAHSFNNRRTKRTEIMFAEAGRVYTYV
MHTHTLLNVVAAEEDVPQAVLIRAIEPHEGQLLMEERRPGRSPREWTNGPGKLTKALGVTMNDYGRWITEQPLYIESGYT
PEAISTGPRIGIDNSGEARDYPWRFWVTGNRYVSR

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family

Homologues:

Organism=Homo sapiens, GI62632769, Length=202, Percent_Identity=33.1683168316832, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI62632771, Length=202, Percent_Identity=33.1683168316832, Blast_Score=85, Evalue=3e-17,
Organism=Homo sapiens, GI62632765, Length=202, Percent_Identity=33.1683168316832, Blast_Score=85, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 3MGH_BACSU (P94378)

Other databases:

- EMBL:   D83026
- EMBL:   AL009126
- PIR:   D70082
- RefSeq:   NP_391741.1
- ProteinModelPortal:   P94378
- SMR:   P94378
- EnsemblBacteria:   EBBACT00000003450
- GeneID:   937391
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38620
- NMPDR:   fig|224308.1.peg.3867
- GenoList:   BSU38620
- GeneTree:   EBGT00050000001691
- HOGENOM:   HBG664239
- OMA:   EHISSQY
- ProtClustDB:   PRK00802
- BioCyc:   BSUB:BSU38620-MONOMER
- HAMAP:   MF_00527
- InterPro:   IPR011034
- InterPro:   IPR003180
- Gene3D:   G3DSA:3.10.300.10
- PANTHER:   PTHR10429
- TIGRFAMs:   TIGR00567

Pfam domain/function: PF02245 Pur_DNA_glyco; SSF50486 FMT_C_like

EC number: 3.2.2.-

Molecular weight: Translated: 22124; Mature: 21993

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTREKNPLPITFYQKTALELAPSLLGCLLVKETDEGTASGYIVETEAYMGAGDRAAHSFN
CCCCCCCCCEEEEHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEHHHCCCCCHHHHHHC
NRRTKRTEIMFAEAGRVYTYVMHTHTLLNVVAAEEDVPQAVLIRAIEPHEGQLLMEERRP
CCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCC
GRSPREWTNGPGKLTKALGVTMNDYGRWITEQPLYIESGYTPEAISTGPRIGIDNSGEAR
CCCCHHHCCCCHHHHHHHCCEEHHCCCEECCCCEEEECCCCCCHHCCCCCCCCCCCCCCC
DYPWRFWVTGNRYVSR
CCCEEEEEECCEEECC
>Mature Secondary Structure 
TREKNPLPITFYQKTALELAPSLLGCLLVKETDEGTASGYIVETEAYMGAGDRAAHSFN
CCCCCCCCEEEEHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEHHHCCCCCHHHHHHC
NRRTKRTEIMFAEAGRVYTYVMHTHTLLNVVAAEEDVPQAVLIRAIEPHEGQLLMEERRP
CCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCC
GRSPREWTNGPGKLTKALGVTMNDYGRWITEQPLYIESGYTPEAISTGPRIGIDNSGEAR
CCCCHHHCCCCHHHHHHHCCEEHHCCCEECCCCEEEECCCCCCHHCCCCCCCCCCCCCCC
DYPWRFWVTGNRYVSR
CCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377