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The map label for this gene is ywgB

Identifier: 16080810

GI number: 16080810

Start: 3858417

End: 3858887

Strand: Reverse

Name: ywgB

Synonym: BSU37580

Alternate gene names: 16080810

Gene position: 3858887-3858417 (Counterclockwise)

Preceding gene: 16080811

Following gene: 16080809

Centisome position: 91.54

GC content: 46.71

Gene sequence:

>471_bases
ATGAAAATGAAATCAGGAATGGAGCAGGCGGTTTCTGTGCTGCTGTTACTGTCACGGCTGCCGGTACAGGCTTCTTTGAC
GTCAGAGGCTATAAGCCAGCGATTGCGCGTGTCTCCGTCTTACTTGAAGAAGCTGATGAGAACATTGGTTCAAGCCGGTT
TGGCAGAATCCTTACCAGGGACGAAGGGCGGTTTTACCCTGACGAAGCCTTTGGCTGACATTACGCTTTATGATGTTTAT
CAAGCGGTCGAAGGCAGAGGTTCGATGTATCAGGGGAAAGGCTTGCTGCAATCTGTATTTGAGGGTGAAAGTCACTGTGT
GCTGGAGACAGTCATGGCGGAAATCGAGGATAAATGGTCCAATCTTATGAGAGAAGAATCCTTGCAGCATGTTATGGACA
GAGTCGGGGAATTGTATGATCTTGAAAAAATAGATGATTGGGTAATCAAGCAAGTGAAAGGGCAATTGTAA

Upstream 100 bases:

>100_bases
AAAAGAAATGATCCGTTTCTTTTGCTTTTTTTATTGACAAAAGCTGCTAAGAGATTCATTATGGATAATAGTTATCCATA
ATGAATCAGGAGTGAATAGG

Downstream 100 bases:

>100_bases
TGAAAAATAGCGGGTCTATACAAGAATCAACATCATCAACAGGCATATCCGTGCTGATCGTGCTCGCACTTGGTTTCCTC
ATGGCAACTCTTGATGTGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLYDVY
QAVEGRGSMYQGKGLLQSVFEGESHCVLETVMAEIEDKWSNLMREESLQHVMDRVGELYDLEKIDDWVIKQVKGQL

Sequences:

>Translated_156_residues
MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLYDVY
QAVEGRGSMYQGKGLLQSVFEGESHCVLETVMAEIEDKWSNLMREESLQHVMDRVGELYDLEKIDDWVIKQVKGQL
>Mature_156_residues
MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLYDVY
QAVEGRGSMYQGKGLLQSVFEGESHCVLETVMAEIEDKWSNLMREESLQHVMDRVGELYDLEKIDDWVIKQVKGQL

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWGB_BACSU (P71047)

Other databases:

- EMBL:   Z80355
- EMBL:   AL009126
- PIR:   A70057
- RefSeq:   NP_391638.1
- ProteinModelPortal:   P71047
- SMR:   P71047
- EnsemblBacteria:   EBBACT00000000071
- GeneID:   937074
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37580
- NMPDR:   fig|224308.1.peg.3764
- GenoList:   BSU37580
- GeneTree:   EBGT00070000032063
- HOGENOM:   HBG218487
- OMA:   MILKSQV
- BioCyc:   BSUB:BSU37580-MONOMER
- InterPro:   IPR000944
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- TIGRFAMs:   TIGR00738

Pfam domain/function: PF02082 Rrf2

EC number: NA

Molecular weight: Translated: 17436; Mature: 17436

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS01332 HTH_RRF2_1; PS51197 HTH_RRF2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
TKGGFTLTKPLADITLYDVYQAVEGRGSMYQGKGLLQSVFEGESHCVLETVMAEIEDKWS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
NLMREESLQHVMDRVGELYDLEKIDDWVIKQVKGQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
TKGGFTLTKPLADITLYDVYQAVEGRGSMYQGKGLLQSVFEGESHCVLETVMAEIEDKWS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
NLMREESLQHVMDRVGELYDLEKIDDWVIKQVKGQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377