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The map label for this gene is ywhD

Identifier: 16080804

GI number: 16080804

Start: 3852186

End: 3852704

Strand: Reverse

Name: ywhD

Synonym: BSU37520

Alternate gene names: 16080804

Gene position: 3852704-3852186 (Counterclockwise)

Preceding gene: 16080805

Following gene: 16080802

Centisome position: 91.39

GC content: 44.51

Gene sequence:

>519_bases
ATGGAAGAAAAAAAGAAAAAATCAATCGGGTTTAATATTATCAAAAGTGATCCGACAGACGGACACGGCGGTTTTGGCGT
AGGGGCACTCAGCCTTGATAACATTTCTCCCGTATTCGTTGATGTAGAGGAAAAAGAAGCGTTCGTAGACATCGGCGCTA
TGCATGCCCGCAGCACCGTTGAAAAAGGAATTAAATTTCTCCCGAATAAAGAAGAAGTGCCGAACGGAAAACCATACTGG
CTTGTGTGGGTAACGATTGACAGAAAAGAAGAGGGGCCTTATTACGCTGGTGTGACAGCCTGTGAAATGACGGTCGACAG
AAGCATCAGAAGAGGCTACAAGTCACTGCCTGAGCATGTGAATCTGATGGATAAATCCATGAAACGGAAAATCATCGTTG
ATAAAATGGACGACAGCTCGAAGCGTGTACTAGGCGAATTTCTGAAAAAGCATGATCAGGGCCTATGGGACCGTTCCTCA
GATGAGTTAAAAACGAGCCTGCTTCCAGAAAACAATTAA

Upstream 100 bases:

>100_bases
GGATCTTACGTGCTGTGGCCGATGCTCAATGCAGGAAGAGATTCGATTTTAAAGCTGTTTTCAGCGATATTTCAACCGCT
TTTGTAGGAGGTAGAACTTC

Downstream 100 bases:

>100_bases
TTTATGAATTTTTTGTGAACTTTTAAAGTATTTGAGATATTTTTCGTAAACATTGAGTAAACTGGTGATACAGAAATAGG
ACATGGAAAATCCCGAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MEEKKKKSIGFNIIKSDPTDGHGGFGVGALSLDNISPVFVDVEEKEAFVDIGAMHARSTVEKGIKFLPNKEEVPNGKPYW
LVWVTIDRKEEGPYYAGVTACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVDKMDDSSKRVLGEFLKKHDQGLWDRSS
DELKTSLLPENN

Sequences:

>Translated_172_residues
MEEKKKKSIGFNIIKSDPTDGHGGFGVGALSLDNISPVFVDVEEKEAFVDIGAMHARSTVEKGIKFLPNKEEVPNGKPYW
LVWVTIDRKEEGPYYAGVTACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVDKMDDSSKRVLGEFLKKHDQGLWDRSS
DELKTSLLPENN
>Mature_172_residues
MEEKKKKSIGFNIIKSDPTDGHGGFGVGALSLDNISPVFVDVEEKEAFVDIGAMHARSTVEKGIKFLPNKEEVPNGKPYW
LVWVTIDRKEEGPYYAGVTACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVDKMDDSSKRVLGEFLKKHDQGLWDRSS
DELKTSLLPENN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWHD_BACSU (P70996)

Other databases:

- EMBL:   Z80360
- EMBL:   AL009126
- PIR:   E70057
- RefSeq:   NP_391632.1
- ProteinModelPortal:   P70996
- EnsemblBacteria:   EBBACT00000002728
- GeneID:   937100
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37520
- NMPDR:   fig|224308.1.peg.3758
- GenoList:   BSU37520
- GeneTree:   EBGT00050000002975
- HOGENOM:   HBG313937
- OMA:   GPYYAGV
- ProtClustDB:   CLSK873708
- BioCyc:   BSUB:BSU37520-MONOMER
- InterPro:   IPR014852

Pfam domain/function: PF08741 YwhD

EC number: NA

Molecular weight: Translated: 19457; Mature: 19457

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKKKKSIGFNIIKSDPTDGHGGFGVGALSLDNISPVFVDVEEKEAFVDIGAMHARSTV
CCCHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
EKGIKFLPNKEEVPNGKPYWLVWVTIDRKEEGPYYAGVTACEMTVDRSIRRGYKSLPEHV
HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH
NLMDKSMKRKIIVDKMDDSSKRVLGEFLKKHDQGLWDRSSDELKTSLLPENN
HHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MEEKKKKSIGFNIIKSDPTDGHGGFGVGALSLDNISPVFVDVEEKEAFVDIGAMHARSTV
CCCHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
EKGIKFLPNKEEVPNGKPYWLVWVTIDRKEEGPYYAGVTACEMTVDRSIRRGYKSLPEHV
HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH
NLMDKSMKRKIIVDKMDDSSKRVLGEFLKKHDQGLWDRSSDELKTSLLPENN
HHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377