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The map label for this gene is ywjB

Identifier: 16080775

GI number: 16080775

Start: 3819220

End: 3819744

Strand: Reverse

Name: ywjB

Synonym: BSU37220

Alternate gene names: 16080775

Gene position: 3819744-3819220 (Counterclockwise)

Preceding gene: 16080776

Following gene: 16080771

Centisome position: 90.61

GC content: 43.43

Gene sequence:

>525_bases
ATGGAAAGAAAAACTGTGCTGTACATTGCTGTTTCATTGGACGGGATGATCGCAAAAGAAGATGGAAGCATCGATTGGCT
GGATGAATTTGAAGGTGAAGGTGACAACGGCTACAGTGATTTTTATCAGACTGTTGATACAGTCATTTTAGGGCGGAGCA
CATATGAGCACGTTAAAGTGCTAACACCGGTTTTCCCGTATCAGGATAAAACCTGCTATGTTTTTACAGGATCGCCCGAC
AGTTATCAAGATGAACATGTGACGTTTATCAATGAGGGAGCCAGAGCCTTCACTGCCCGTTTGAAACAGGAAAAAGGCTC
AAACATCTGGATAGCTGGCGGGGCAGAGCTTGTGAATGACTTTATGAAAGAAGATGCCATCGACGAATTCATCATCACTG
TTATTCCCGTCGTTTTAGGAAGCGGCATCCCGCTGTTTCACGAACTAACAAATGAAACAAAACTGCGGTTAAAAGGGACA
AAACAATTTGGACAAGCGGTTCAGCTCCATTATGTAAGAGCATAA

Upstream 100 bases:

>100_bases
AGAACAAGGCCGTCATCAAGACCTGATCGAAGCCGGAGGCCTATACAGCAGGCTGCATCAAGCGCAATTCGGGCAAATGG
TGCATCGATAGGAGGAGAAC

Downstream 100 bases:

>100_bases
GAAAAAGGATAGACAGATGTCTATCCTTTTTTGTATGTAAGTTAGAGCGCTTCTCTCTCAGCAGGCTCGATGAGATTTTG
GAATTTTTCAATGAGCTGTG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MERKTVLYIAVSLDGMIAKEDGSIDWLDEFEGEGDNGYSDFYQTVDTVILGRSTYEHVKVLTPVFPYQDKTCYVFTGSPD
SYQDEHVTFINEGARAFTARLKQEKGSNIWIAGGAELVNDFMKEDAIDEFIITVIPVVLGSGIPLFHELTNETKLRLKGT
KQFGQAVQLHYVRA

Sequences:

>Translated_174_residues
MERKTVLYIAVSLDGMIAKEDGSIDWLDEFEGEGDNGYSDFYQTVDTVILGRSTYEHVKVLTPVFPYQDKTCYVFTGSPD
SYQDEHVTFINEGARAFTARLKQEKGSNIWIAGGAELVNDFMKEDAIDEFIITVIPVVLGSGIPLFHELTNETKLRLKGT
KQFGQAVQLHYVRA
>Mature_174_residues
MERKTVLYIAVSLDGMIAKEDGSIDWLDEFEGEGDNGYSDFYQTVDTVILGRSTYEHVKVLTPVFPYQDKTCYVFTGSPD
SYQDEHVTFINEGARAFTARLKQEKGSNIWIAGGAELVNDFMKEDAIDEFIITVIPVVLGSGIPLFHELTNETKLRLKGT
KQFGQAVQLHYVRA

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWJB_BACSU (P45862)

Other databases:

- EMBL:   Z49782
- EMBL:   AL009126
- PIR:   S55416
- RefSeq:   NP_391603.1
- ProteinModelPortal:   P45862
- SMR:   P45862
- EnsemblBacteria:   EBBACT00000000670
- GeneID:   938455
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37220
- NMPDR:   fig|224308.1.peg.3729
- GenoList:   BSU37220
- GeneTree:   EBGT00050000002548
- HOGENOM:   HBG697409
- OMA:   DTIIMGK
- ProtClustDB:   CLSK2752543
- BioCyc:   BSUB:BSU37220-MONOMER
- InterPro:   IPR002734

Pfam domain/function: PF01872 RibD_C

EC number: NA

Molecular weight: Translated: 19582; Mature: 19582

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12d72638)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKTVLYIAVSLDGMIAKEDGSIDWLDEFEGEGDNGYSDFYQTVDTVILGRSTYEHVKV
CCCCEEEEEEEECCCEEEECCCCEECHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHE
LTPVFPYQDKTCYVFTGSPDSYQDEHVTFINEGARAFTARLKQEKGSNIWIAGGAELVND
ECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCHHHHHH
FMKEDAIDEFIITVIPVVLGSGIPLFHELTNETKLRLKGTKQFGQAVQLHYVRA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCHHHCCEEEEEEECH
>Mature Secondary Structure
MERKTVLYIAVSLDGMIAKEDGSIDWLDEFEGEGDNGYSDFYQTVDTVILGRSTYEHVKV
CCCCEEEEEEEECCCEEEECCCCEECHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHE
LTPVFPYQDKTCYVFTGSPDSYQDEHVTFINEGARAFTARLKQEKGSNIWIAGGAELVND
ECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCHHHHHH
FMKEDAIDEFIITVIPVVLGSGIPLFHELTNETKLRLKGTKQFGQAVQLHYVRA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCHHHCCEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377