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The map label for this gene is spoIIR

Identifier: 16080750

GI number: 16080750

Start: 3794676

End: 3795350

Strand: Reverse

Name: spoIIR

Synonym: BSU36970

Alternate gene names: 16080750

Gene position: 3795350-3794676 (Counterclockwise)

Preceding gene: 16080752

Following gene: 16080749

Centisome position: 90.03

GC content: 42.07

Gene sequence:

>675_bases
ATGAAAAAAACAGTAATCATTTGTATATATATCTTTCTTTTATTATCCGGAGCGCTCGTAGGGCTGGCAAAAGAAGAGAC
GGCACAAAAATCGGAAAATCAGCCGGTGGTCATACCTGATCAGGCGATTCGTTTGAGAATACTGGCAAACAGCGATAGTG
ATCAAGACCAGCAATTAAAACGTCATATAAGAGACGCGGTGAATAAAGAAATCACAACTTGGGTAAAGGATATTACTTCT
ATTGAAGAAGCGCGTCGCGTGATTCGTTCAAAGCTGCCTGAAATCAAAGCAATTGCAAAGGAAACAATGGAGAAAGAAGG
AGCGAATCAGTCGATATCCGTTGATTTTGACAAAATCTCGTTTCCGACAAAGCTTTACGGCAACATGGTATATCCCGCTG
GTGAGTATGAAGCGATTTTGATTACGCTTGGAAACGGAGACGGCGCCAACTGGTGGTGTGTGCTGTTCCCGCCCCTCTGC
TTTCTTGATTTTTCTAACGGGGAAGCCGTCAAAGAACAAGAAGATAAAGAAGCCTCAAAAAAGCAGACTGAAAAAGTGCT
TGAGGACGTAACCGCTAAAGCGGAAAAAGCCAAAAAAGAAGAGAACGAAGAAAAAGAAGACGGCACAGAAGTGAAATTCT
TTTTAGTCGAATGGATTTCCGACCTTTTTTCCTAA

Upstream 100 bases:

>100_bases
AACAGCTTGCTAGATTTTTTTCACCCTGCACGTTTATCCCAGGCTCTCCTTGTCCATAATAGGGCTAGAAACAAAGCACG
GAGAGGAACGGTGGGGACCG

Downstream 100 bases:

>100_bases
TCATCTGGTCTAAAAATAGATTTGCCTCATAGATTGGAAGAAAGAACGCAAAAACGGGGTGAACGGATGTTTTATCAACT
GCGGGTGGCAAGGGAAAAAG

Product: pro-sigma(E) endopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKKTVIICIYIFLLLSGALVGLAKEETAQKSENQPVVIPDQAIRLRILANSDSDQDQQLKRHIRDAVNKEITTWVKDITS
IEEARRVIRSKLPEIKAIAKETMEKEGANQSISVDFDKISFPTKLYGNMVYPAGEYEAILITLGNGDGANWWCVLFPPLC
FLDFSNGEAVKEQEDKEASKKQTEKVLEDVTAKAEKAKKEENEEKEDGTEVKFFLVEWISDLFS

Sequences:

>Translated_224_residues
MKKTVIICIYIFLLLSGALVGLAKEETAQKSENQPVVIPDQAIRLRILANSDSDQDQQLKRHIRDAVNKEITTWVKDITS
IEEARRVIRSKLPEIKAIAKETMEKEGANQSISVDFDKISFPTKLYGNMVYPAGEYEAILITLGNGDGANWWCVLFPPLC
FLDFSNGEAVKEQEDKEASKKQTEKVLEDVTAKAEKAKKEENEEKEDGTEVKFFLVEWISDLFS
>Mature_224_residues
MKKTVIICIYIFLLLSGALVGLAKEETAQKSENQPVVIPDQAIRLRILANSDSDQDQQLKRHIRDAVNKEITTWVKDITS
IEEARRVIRSKLPEIKAIAKETMEKEGANQSISVDFDKISFPTKLYGNMVYPAGEYEAILITLGNGDGANWWCVLFPPLC
FLDFSNGEAVKEQEDKEASKKQTEKVLEDVTAKAEKAKKEENEEKEDGTEVKFFLVEWISDLFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SP2R_BACSU (P39151)

Other databases:

- EMBL:   Z38002
- EMBL:   AL009126
- PIR:   I40474
- RefSeq:   NP_391578.1
- ProteinModelPortal:   P39151
- EnsemblBacteria:   EBBACT00000000718
- GeneID:   937017
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36970
- NMPDR:   fig|224308.1.peg.3704
- GenoList:   BSU36970
- GeneTree:   EBGT00050000000350
- HOGENOM:   HBG499243
- OMA:   SFPTKLY
- ProtClustDB:   CLSK888048
- BioCyc:   BSUB:BSU36970-MONOMER
- InterPro:   IPR014202
- TIGRFAMs:   TIGR02837

Pfam domain/function: PF09551 Spore_II_R

EC number: NA

Molecular weight: Translated: 25346; Mature: 25346

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVIICIYIFLLLSGALVGLAKEETAQKSENQPVVIPDQAIRLRILANSDSDQDQQLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCCHHHHHH
RHIRDAVNKEITTWVKDITSIEEARRVIRSKLPEIKAIAKETMEKEGANQSISVDFDKIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEHHHHC
FPTKLYGNMVYPAGEYEAILITLGNGDGANWWCVLFPPLCFLDFSNGEAVKEQEDKEASK
CCHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHH
KQTEKVLEDVTAKAEKAKKEENEEKEDGTEVKFFLVEWISDLFS
HHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTVIICIYIFLLLSGALVGLAKEETAQKSENQPVVIPDQAIRLRILANSDSDQDQQLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCCHHHHHH
RHIRDAVNKEITTWVKDITSIEEARRVIRSKLPEIKAIAKETMEKEGANQSISVDFDKIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEHHHHC
FPTKLYGNMVYPAGEYEAILITLGNGDGANWWCVLFPPLCFLDFSNGEAVKEQEDKEASK
CCHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHH
KQTEKVLEDVTAKAEKAKKEENEEKEDGTEVKFFLVEWISDLFS
HHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377