Click here to switch to the map view.

The map label for this gene is tuaF

Identifier: 16080609

GI number: 16080609

Start: 3651879

End: 3652559

Strand: Reverse

Name: tuaF

Synonym: BSU35560

Alternate gene names: 16080609

Gene position: 3652559-3651879 (Counterclockwise)

Preceding gene: 16080610

Following gene: 16080608

Centisome position: 86.64

GC content: 42.88

Gene sequence:

>681_bases
ATGAACGATATATTGATAAGAATAGCCCGTCGCATAAAAAAAAATATCATTTGGATCATAGCGGTGCCAATTATATTAGG
TGCGGCGGGGTATATCCTGCCGTCACAGATCGCTGATCAAAAGAGCTATACAGCTGAAGATACTTTGGCTGTGGGGAGCT
ATGATCATCCGGTTTATAACAGCACAGAAGAGATTCCGCTTCTATTAAAGAGCGACTCCTTTTTGAAGGAGGCGCTTCCT
GATGAAAAGGATGAAGATGTAGCAGAGATCAAAGAGAAGCTTACAATCAATACGGAATCCAAATCGTTACTGACTTTAAG
CTATAGTGACGAGGATAAGGATAGAACGGAATCTGTCTTAAACGCCATATCCTCCACCTTCCTCAAAAACGATCAAAAGC
TGTATGCAGAAAGAGAAGCCGTCATCCGCAGCAGCATAGACGCGCTTGAAGGCGAGTCGGTGAGCGAGGATTCCAAAGTG
GATAAAGAGAGATTTTTATATGAACTCAAAAACACACAGCTTAACCTGAAAGCGGCAAGTGTTACTGATTCCGAAACCGT
AAGTGAGACAGCAGGCGGCGGTATGTCTCCGAAAAAGAAAGCAGTTCTCGGCGTTATGATTGGCCTTACGATTGCCTTTA
TGTTCGTTGTCATTCCTGAATTTTTCAGAGAATCCTTTTAA

Upstream 100 bases:

>100_bases
ATGGCGCTCGTCATCGCCGCCGTGAATGTGTTAAGGCGATCCAGACAAATGCCTGAGCCGATGTACAGATAAACAGACTA
CAAAAAGCAGGGAGACTTAT

Downstream 100 bases:

>100_bases
AATCATACGATGGAGATGTGATCATGACCAATTGGAAACCTCTCGTATCTGTCATTACACCTTCCTATAATGCGCGTGAC
TATATTGAAGACACGGTTCA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNDILIRIARRIKKNIIWIIAVPIILGAAGYILPSQIADQKSYTAEDTLAVGSYDHPVYNSTEEIPLLLKSDSFLKEALP
DEKDEDVAEIKEKLTINTESKSLLTLSYSDEDKDRTESVLNAISSTFLKNDQKLYAEREAVIRSSIDALEGESVSEDSKV
DKERFLYELKNTQLNLKAASVTDSETVSETAGGGMSPKKKAVLGVMIGLTIAFMFVVIPEFFRESF

Sequences:

>Translated_226_residues
MNDILIRIARRIKKNIIWIIAVPIILGAAGYILPSQIADQKSYTAEDTLAVGSYDHPVYNSTEEIPLLLKSDSFLKEALP
DEKDEDVAEIKEKLTINTESKSLLTLSYSDEDKDRTESVLNAISSTFLKNDQKLYAEREAVIRSSIDALEGESVSEDSKV
DKERFLYELKNTQLNLKAASVTDSETVSETAGGGMSPKKKAVLGVMIGLTIAFMFVVIPEFFRESF
>Mature_226_residues
MNDILIRIARRIKKNIIWIIAVPIILGAAGYILPSQIADQKSYTAEDTLAVGSYDHPVYNSTEEIPLLLKSDSFLKEALP
DEKDEDVAEIKEKLTINTESKSLLTLSYSDEDKDRTESVLNAISSTFLKNDQKLYAEREAVIRSSIDALEGESVSEDSKV
DKERFLYELKNTQLNLKAASVTDSETVSETAGGGMSPKKKAVLGVMIGLTIAFMFVVIPEFFRESF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TUAF_BACSU (O32269)

Other databases:

- EMBL:   AF015609
- EMBL:   AL009126
- PIR:   H69727
- RefSeq:   NP_391436.1
- ProteinModelPortal:   O32269
- EnsemblBacteria:   EBBACT00000000317
- GeneID:   936768
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35560
- NMPDR:   fig|224308.1.peg.3562
- GenoList:   BSU35560
- GeneTree:   EBGT00050000001133
- HOGENOM:   HBG338362
- OMA:   KERFLYE
- ProtClustDB:   CLSK887965
- BioCyc:   BSUB:BSU35560-MONOMER
- InterPro:   IPR003856

Pfam domain/function: PF02706 Wzz

EC number: NA

Molecular weight: Translated: 25135; Mature: 25135

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x123fa680)-; HASH(0x40bf34b8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDILIRIARRIKKNIIWIIAVPIILGAAGYILPSQIADQKSYTAEDTLAVGSYDHPVYN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHCCCCCCCCHHEEECCCCCCCCC
STEEIPLLLKSDSFLKEALPDEKDEDVAEIKEKLTINTESKSLLTLSYSDEDKDRTESVL
CCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHH
NAISSTFLKNDQKLYAEREAVIRSSIDALEGESVSEDSKVDKERFLYELKNTQLNLKAAS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEC
VTDSETVSETAGGGMSPKKKAVLGVMIGLTIAFMFVVIPEFFRESF
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MNDILIRIARRIKKNIIWIIAVPIILGAAGYILPSQIADQKSYTAEDTLAVGSYDHPVYN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHCCCCCCCCHHEEECCCCCCCCC
STEEIPLLLKSDSFLKEALPDEKDEDVAEIKEKLTINTESKSLLTLSYSDEDKDRTESVL
CCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHH
NAISSTFLKNDQKLYAEREAVIRSSIDALEGESVSEDSKVDKERFLYELKNTQLNLKAAS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEC
VTDSETVSETAGGGMSPKKKAVLGVMIGLTIAFMFVVIPEFFRESF
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377