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The map label for this gene is comFB

Identifier: 16080599

GI number: 16080599

Start: 3641811

End: 3642107

Strand: Reverse

Name: comFB

Synonym: BSU35460

Alternate gene names: 16080599

Gene position: 3642107-3641811 (Counterclockwise)

Preceding gene: 16080600

Following gene: 16080598

Centisome position: 86.4

GC content: 39.39

Gene sequence:

>297_bases
ATGCTTGTCAATTCAAAAGAAATCGTAATGAAAGAACTGCTCGACCGATATATGGACCAGCTTCATATGGCCTGTACTTG
CCAAGTATGCCAAAACGATGTATTGGCACTTTCTTTAAACAAAGTGAGTCCATCCTACGTTACTGATTTTAAAAAGATCG
CATATACGAAAGCTGAGCTGGTAGATAAACAAAAAAACACAGCAATGCTTGTCATTTTGGCTGAATCTGCTGCAGTAGTT
TCAGAGAGTCCAAGCGATTTATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGA

Upstream 100 bases:

>100_bases
AAATGAATGAATTGGCAGCAAAAGTTGAATGTACAGACTAGCCATTATTTGAAAACGTGGTACAGTATACTCATATAACC
GATGATGAGGAGCTGTAAAA

Downstream 100 bases:

>100_bases
TCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATGGAGAGCCCTTTTTTTACTAAAGCCTGATGAAAAGGTT
TGTTATTCTTGCAGAAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MLVNSKEIVMKELLDRYMDQLHMACTCQVCQNDVLALSLNKVSPSYVTDFKKIAYTKAELVDKQKNTAMLVILAESAAVV
SESPSDLCQTKQEEAFIN

Sequences:

>Translated_98_residues
MLVNSKEIVMKELLDRYMDQLHMACTCQVCQNDVLALSLNKVSPSYVTDFKKIAYTKAELVDKQKNTAMLVILAESAAVV
SESPSDLCQTKQEEAFIN
>Mature_98_residues
MLVNSKEIVMKELLDRYMDQLHMACTCQVCQNDVLALSLNKVSPSYVTDFKKIAYTKAELVDKQKNTAMLVILAESAAVV
SESPSDLCQTKQEEAFIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COMFB_BACSU (P39146)

Other databases:

- EMBL:   Z18629
- EMBL:   U56901
- EMBL:   AL009126
- PIR:   I40388
- RefSeq:   NP_391426.1
- EnsemblBacteria:   EBBACT00000002927
- GeneID:   936749
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35460
- NMPDR:   fig|224308.1.peg.3552
- GenoList:   BSU35460
- GeneTree:   EBGT00050000003006
- HOGENOM:   HBG338359
- OMA:   VDKQKNT
- ProtClustDB:   CLSK887959
- BioCyc:   BSUB:BSU35460-MONOMER
- InterPro:   IPR019657

Pfam domain/function: PF10719 ComFB

EC number: NA

Molecular weight: Translated: 10976; Mature: 10976

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVNSKEIVMKELLDRYMDQLHMACTCQVCQNDVLALSLNKVSPSYVTDFKKIAYTKAEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VDKQKNTAMLVILAESAAVVSESPSDLCQTKQEEAFIN
HHCCCCCEEEEEEECCCHHHCCCHHHHHHCCHHHCCCC
>Mature Secondary Structure
MLVNSKEIVMKELLDRYMDQLHMACTCQVCQNDVLALSLNKVSPSYVTDFKKIAYTKAEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VDKQKNTAMLVILAESAAVVSESPSDLCQTKQEEAFIN
HHCCCCCEEEEEEECCCHHHCCCHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377