Click here to switch to the map view.

The map label for this gene is minJ

Identifier: 16080575

GI number: 16080575

Start: 3620346

End: 3621539

Strand: Reverse

Name: minJ

Synonym: BSU35220

Alternate gene names: 16080575

Gene position: 3621539-3620346 (Counterclockwise)

Preceding gene: 16080577

Following gene: 16080571

Centisome position: 85.91

GC content: 46.73

Gene sequence:

>1194_bases
GTGTCTGTTCAATGGGGAATTGAACTGTTAAAAAGCGCGGGCTTGTTCTTCTTACACCCGCTTTTCTGGTTTTTTATCAT
CATAACCTTGGCTTTCGGCTATGTAAGAATCAAACGGGAACGAAAAACCTTTCATACAAGAATAGCAGATATTTATGATG
ATCTGAAATTTACATATACAAAGGGACTGATTCCAGGTCTTCTTTTGTCAGTTATTTTAGGTGGACTCGGAATATCGATT
CCTCTCGGTTTACTTGCGATTATTGCCGTTATCACTGCAGCGGCAGCGTTCACTCTTCGCGCAAACTGGATGTCTGCTGC
ATATATCGTCAGTGTGAGTATGCTGATAGGTTTTGGACTGCAAATATATCAGGCGGAGCCCTTTCTGGAGAGATTTCCGC
AAGGATTTGCAGTTGTTTGGCCGGCTGTGGCTGTGTTTCTAGGTTTGCTGATTATCACTGAAGGAGCGGTTGCTTATCGT
TCTGCGCATGTGAGAACATCACCGGCACTTGTCGTAAGCAGCCGCGGTTTGCCGATCGGACAGCAGCTGGCAAACCGGGT
TTGGCTTTTGCCGCTGTTCCTTCTCGTGCCCGGTAATGGTTTAGAATCGCACCTTAGCTGGTGGCCCGTGTTTACGGTTC
CCGGCGGCTCATTCCATTTTCTATGGATTCCTTACTTTGTCGGATTTGGACAAAGGGTACAGGGATCGCTGCCTGAAACG
AGTATAAGGATCACAGCGAAACGCGTTTGTATTCTCGGTCTTGCCGTCGCAGTTCTCGGTGCAGCGAGCTTACTGTGGAC
GCCGCTTGCGGGTGCAGCGGTCTGTACCGCTTTGTTAGGGCGTATTTTTCTGTCCATAAAGCAAAGAGTGAATGATAACG
CGGCTCCGTTTTATTTCTCGAAAAGGGATCAGGGCTTAATGGTGCTTGGGATTATCCCCAATACGCCGGCTGAGGATCTG
GAATTGAAAATCGGGGAAATCATAACGAAAGTCAATGGCATACCGGTTAAGAACGTTTCTGATTTCTATGAAGCGCTTCA
GCATAACCGTGCATATGTAAAGCTTGAAATTATCGGTTTGAATGGAGAAATTCGTTTTGACCAGCGAGCTTCTTATGAAG
GAGAACATCATGAATTGGGCATCCTCTTCGTAAAGGATGACCGTGAAGACGAAGCAGTCGCTTCGGGATCATAA

Upstream 100 bases:

>100_bases
GTGGATGACGCAAGAGAGATAAACTCTCCTGAGGATATCCAAGCCATTTAATATTTGATAGAATATGAGTAACATGTTTG
GCTTGAGGCGGTGAGAGATA

Downstream 100 bases:

>100_bases
AAGGCAGCCCGGCACCGCAGGATGATGCGATGCCGGGCTGTTTTGTGTTACGCTGAGTTTTTTTCTATCCGTGCCGTTTC
ATCAGATTTGATGCCCAATG

Product: topological determinant of cell division

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSVQWGIELLKSAGLFFLHPLFWFFIIITLAFGYVRIKRERKTFHTRIADIYDDLKFTYTKGLIPGLLLSVILGGLGISI
PLGLLAIIAVITAAAAFTLRANWMSAAYIVSVSMLIGFGLQIYQAEPFLERFPQGFAVVWPAVAVFLGLLIITEGAVAYR
SAHVRTSPALVVSSRGLPIGQQLANRVWLLPLFLLVPGNGLESHLSWWPVFTVPGGSFHFLWIPYFVGFGQRVQGSLPET
SIRITAKRVCILGLAVAVLGAASLLWTPLAGAAVCTALLGRIFLSIKQRVNDNAAPFYFSKRDQGLMVLGIIPNTPAEDL
ELKIGEIITKVNGIPVKNVSDFYEALQHNRAYVKLEIIGLNGEIRFDQRASYEGEHHELGILFVKDDREDEAVASGS

Sequences:

>Translated_397_residues
MSVQWGIELLKSAGLFFLHPLFWFFIIITLAFGYVRIKRERKTFHTRIADIYDDLKFTYTKGLIPGLLLSVILGGLGISI
PLGLLAIIAVITAAAAFTLRANWMSAAYIVSVSMLIGFGLQIYQAEPFLERFPQGFAVVWPAVAVFLGLLIITEGAVAYR
SAHVRTSPALVVSSRGLPIGQQLANRVWLLPLFLLVPGNGLESHLSWWPVFTVPGGSFHFLWIPYFVGFGQRVQGSLPET
SIRITAKRVCILGLAVAVLGAASLLWTPLAGAAVCTALLGRIFLSIKQRVNDNAAPFYFSKRDQGLMVLGIIPNTPAEDL
ELKIGEIITKVNGIPVKNVSDFYEALQHNRAYVKLEIIGLNGEIRFDQRASYEGEHHELGILFVKDDREDEAVASGS
>Mature_396_residues
SVQWGIELLKSAGLFFLHPLFWFFIIITLAFGYVRIKRERKTFHTRIADIYDDLKFTYTKGLIPGLLLSVILGGLGISIP
LGLLAIIAVITAAAAFTLRANWMSAAYIVSVSMLIGFGLQIYQAEPFLERFPQGFAVVWPAVAVFLGLLIITEGAVAYRS
AHVRTSPALVVSSRGLPIGQQLANRVWLLPLFLLVPGNGLESHLSWWPVFTVPGGSFHFLWIPYFVGFGQRVQGSLPETS
IRITAKRVCILGLAVAVLGAASLLWTPLAGAAVCTALLGRIFLSIKQRVNDNAAPFYFSKRDQGLMVLGIIPNTPAEDLE
LKIGEIITKVNGIPVKNVSDFYEALQHNRAYVKLEIIGLNGEIRFDQRASYEGEHHELGILFVKDDREDEAVASGS

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SWRAB_BACSU (O34375)

Other databases:

- EMBL:   AF017113
- EMBL:   AL009126
- PIR:   F70042
- RefSeq:   NP_391402.1
- ProteinModelPortal:   O34375
- SMR:   O34375
- EnsemblBacteria:   EBBACT00000002841
- GeneID:   936668
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35220
- NMPDR:   fig|224308.1.peg.3528
- GenoList:   BSU35220
- GeneTree:   EBGT00050000002101
- HOGENOM:   HBG533565
- OMA:   LESHLSW
- ProtClustDB:   CLSK887948
- BioCyc:   BSUB:BSU35220-MONOMER
- InterPro:   IPR001478
- SMART:   SM00228

Pfam domain/function: SSF50156 PDZ

EC number: NA

Molecular weight: Translated: 43667; Mature: 43536

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1246b2a8)-; HASH(0x124ff618)-; HASH(0x12b7d378)-; HASH(0x40c30b8c)-; HASH(0x1150c4c4)-; HASH(0x129e706c)-; HASH(0x125cc398)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQWGIELLKSAGLFFLHPLFWFFIIITLAFGYVRIKRERKTFHTRIADIYDDLKFTYT
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH
KGLIPGLLLSVILGGLGISIPLGLLAIIAVITAAAAFTLRANWMSAAYIVSVSMLIGFGL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QIYQAEPFLERFPQGFAVVWPAVAVFLGLLIITEGAVAYRSAHVRTSPALVVSSRGLPIG
EEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCHH
QQLANRVWLLPLFLLVPGNGLESHLSWWPVFTVPGGSFHFLWIPYFVGFGQRVQGSLPET
HHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEECCCCEEEEEHHHHHCCCCHHCCCCCCC
SIRITAKRVCILGLAVAVLGAASLLWTPLAGAAVCTALLGRIFLSIKQRVNDNAAPFYFS
EEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
KRDQGLMVLGIIPNTPAEDLELKIGEIITKVNGIPVKNVSDFYEALQHNRAYVKLEIIGL
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEEEC
NGEIRFDQRASYEGEHHELGILFVKDDREDEAVASGS
CCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCH
>Mature Secondary Structure 
SVQWGIELLKSAGLFFLHPLFWFFIIITLAFGYVRIKRERKTFHTRIADIYDDLKFTYT
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH
KGLIPGLLLSVILGGLGISIPLGLLAIIAVITAAAAFTLRANWMSAAYIVSVSMLIGFGL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QIYQAEPFLERFPQGFAVVWPAVAVFLGLLIITEGAVAYRSAHVRTSPALVVSSRGLPIG
EEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCHH
QQLANRVWLLPLFLLVPGNGLESHLSWWPVFTVPGGSFHFLWIPYFVGFGQRVQGSLPET
HHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEECCCCEEEEEHHHHHCCCCHHCCCCCCC
SIRITAKRVCILGLAVAVLGAASLLWTPLAGAAVCTALLGRIFLSIKQRVNDNAAPFYFS
EEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
KRDQGLMVLGIIPNTPAEDLELKIGEIITKVNGIPVKNVSDFYEALQHNRAYVKLEIIGL
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEEEC
NGEIRFDQRASYEGEHHELGILFVKDDREDEAVASGS
CCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377