Click here to switch to the map view.

The map label for this gene is yvcJ

Identifier: 16080530

GI number: 16080530

Start: 3571501

End: 3572388

Strand: Reverse

Name: yvcJ

Synonym: BSU34770

Alternate gene names: 16080530

Gene position: 3572388-3571501 (Counterclockwise)

Preceding gene: 16080531

Following gene: 50812297

Centisome position: 84.74

GC content: 44.82

Gene sequence:

>888_bases
ATGAGTGTTAGTGAATCACATGATATTCAGCTTGTCATTATAACTGGAATGTCGGGAGCGGGGAAAACTGTCGCGATCCA
AAGCTTTGAAGATCTCGGCTATTTCTGCGTCGATAATCTTCCGCCTTCATTGCTTCCGAAGTTTTTAGAGCTGATGAAGG
AATCAAATTCGAAAATGAGCAAAGTTGCGCTCGTGATGGATTTGCGCGGCCGCGAATTTTTTGACCGGCTGATTGAAGCG
CTGGATGAAATGGCCGAAAATCCGTGGATCACACCGCGAATTTTATTCCTGGACGCGAAGGATTCCATTCTCGTCACAAG
ATATAAAGAAACGAGACGCTCGCATCCGCTGGCAGCGACTGGCCTGCCGCTTGAAGGCATCGCGCTAGAACGAGAGCTGC
TTGAGGAATTAAAAGGCCGCTCTCAAATCATTTACGATACGTCTGACATGAAGCCGCGTGATTTGCGTGAAAAAATCGTG
AAGCACTTTGCGACAAACCAAGGAGAGACATTTACCGTAAATGTGATGTCATTTGGTTTTAAATACGGTATTCCAATTGA
TGCAGATCTCGTCTTTGATGTCAGATTTTTGCCGAATCCGTACTATATCGAAAGCATGCGGCCGCTGACTGGCAAGGATA
AAGAGGTTTCCTCTTACGTCATGAAGTGGAATGAAACGCAAAAGTTCAATGAGAAATTAATTGATCTGCTGAGCTTTATG
CTTCCATCTTACAAAAGAGAAGGAAAAAGCCAGGTTGTCATTGCGATCGGCTGCACAGGGGGCCAGCACCGCTCTGTGAC
ATTAGCCGAGAATTTAGCTGATTATTTCAAAAAGGATTACTATACTCATGTTACTCACCGGGACATTGAAAAGAGAAGCC
GGAAATAA

Upstream 100 bases:

>100_bases
GCTGCACGGCACATTTACGTATACACCGGAATTTGAGCTGCTCAGTTATCGTTTAGACCCGCAGCACATCAAATAGAAAG
ACAAGTCAGGGGGGAGAAAG

Downstream 100 bases:

>100_bases
GATGGGACAAAAGCCGAAAATCGCAATCTTTGGCGGCGGTACAGGTCTTTCTGTATTGCTTCGGGGCCTAAAGCATAAAC
CCGTTGACATCACGGCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSVSESHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLELMKESNSKMSKVALVMDLRGREFFDRLIEA
LDEMAENPWITPRILFLDAKDSILVTRYKETRRSHPLAATGLPLEGIALERELLEELKGRSQIIYDTSDMKPRDLREKIV
KHFATNQGETFTVNVMSFGFKYGIPIDADLVFDVRFLPNPYYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFM
LPSYKREGKSQVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIEKRSRK

Sequences:

>Translated_295_residues
MSVSESHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLELMKESNSKMSKVALVMDLRGREFFDRLIEA
LDEMAENPWITPRILFLDAKDSILVTRYKETRRSHPLAATGLPLEGIALERELLEELKGRSQIIYDTSDMKPRDLREKIV
KHFATNQGETFTVNVMSFGFKYGIPIDADLVFDVRFLPNPYYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFM
LPSYKREGKSQVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIEKRSRK
>Mature_294_residues
SVSESHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLELMKESNSKMSKVALVMDLRGREFFDRLIEAL
DEMAENPWITPRILFLDAKDSILVTRYKETRRSHPLAATGLPLEGIALERELLEELKGRSQIIYDTSDMKPRDLREKIVK
HFATNQGETFTVNVMSFGFKYGIPIDADLVFDVRFLPNPYYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFML
PSYKREGKSQVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIEKRSRK

Specific function: Displays ATPase and GTPase activities [H]

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family [H]

Homologues:

Organism=Escherichia coli, GI1789598, Length=288, Percent_Identity=41.3194444444444, Blast_Score=221, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005337 [H]

Pfam domain/function: PF03668 ATP_bind_2 [H]

EC number: NA

Molecular weight: Translated: 33851; Mature: 33720

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSESHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLELMKESNSKMS
CCCCCCCCEEEEEEECCCCCCCEEEEECHHHCCEEEECCCCHHHHHHHHHHHHHCCCHHH
KVALVMDLRGREFFDRLIEALDEMAENPWITPRILFLDAKDSILVTRYKETRRSHPLAAT
HEEEEHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHCCCCCEEC
GLPLEGIALERELLEELKGRSQIIYDTSDMKPRDLREKIVKHFATNQGETFTVNVMSFGF
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECE
KYGIPIDADLVFDVRFLPNPYYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFM
EECCCCCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
LPSYKREGKSQVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIEKRSRK
HHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVSESHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLELMKESNSKMS
CCCCCCCEEEEEEECCCCCCCEEEEECHHHCCEEEECCCCHHHHHHHHHHHHHCCCHHH
KVALVMDLRGREFFDRLIEALDEMAENPWITPRILFLDAKDSILVTRYKETRRSHPLAAT
HEEEEHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHCCCCCEEC
GLPLEGIALERELLEELKGRSQIIYDTSDMKPRDLREKIVKHFATNQGETFTVNVMSFGF
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECE
KYGIPIDADLVFDVRFLPNPYYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFM
EECCCCCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
LPSYKREGKSQVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIEKRSRK
HHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA