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The map label for this gene is yvdP

Identifier: 16080505

GI number: 16080505

Start: 3542943

End: 3544286

Strand: Reverse

Name: yvdP

Synonym: BSU34520

Alternate gene names: 16080505

Gene position: 3544286-3542943 (Counterclockwise)

Preceding gene: 16080508

Following gene: 16080504

Centisome position: 84.08

GC content: 41.37

Gene sequence:

>1344_bases
ATGGGATCAACACAGTTGACAGGGCGTGTAATCTTCAAAGGAGACCCCGGCTATACAGAGGCTATTAAGAATTGGAACCC
TTATGTGGATGTCTATCCTCTTGTCTTTGTTTTTGCGCAAAATTCATACGATGTAAGTAATGCCATTAAATGGGCTCGTG
AGAATAAAGTGCCCTTACGTGTCAGAAGCGGTCGCCATGCTTTAGATAAGAACCTTTCAGTAGTAAGTGGAGGAATTGTT
ATTGATGTGAGTGACATGAATAAAGTTTTCTTAGATGAAGAAAACGCTATTGCAACCGTTCAAACTGGTATTCCCGTTGG
CCCGCTTGTAAAGGGATTAGCTCGAGACGGTTTTATGGCTCCGTTTGGAGATAGCCCAACAGTTGGAATCGGGGGAATTA
CGATGGGCGGCGGATTTGGTGTACTCTCACGATCGATTGGCCTTATAAGTGATAACCTTCTCGCGCTGAAAACGGTAGAT
GCAAAAGGAAGGATTATTCACGCAGATCAATCTCACAATGAGGATTTGCTATGGGCTTCTAGAGGCGGAGGAGGAGGTAA
CTTTGGATATAATACCCAATATACATTCAAAGTTCATCGTGCCCCTAAAACTGCAACCGTCTTCAATATTATCTGGCCGT
GGGAACAATTAGAAACGGTATTTAAAGCTTGGCAGAAATGGGCTCCGTTTGTAGATGAACGATTAGGATGCTACCTTGAA
ATTTACAGCAAAATAAATGGTTTGTGTCATGCAGAAGGAATTTTCCTCGGTTCGAAAACTGAATTGATTCGATTATTAAA
ACCTTTATTACATGCGGGAACTCCAACAGAAGCAGATATCAAAACATTATACTATCCAGATGCTATAGATTTCTTAGACC
CTGACGAACCCATCCCTGGCAGAAATGATCAGAGTGTTAAATTCTCCTCGGCATGGGGTCATGATTTTTGGTCTGACGAA
CCCATTTCAATCATGAGAAAATTTTTGGAAGATGCTACTGGAACAGAAGCCAATTTCTTTTTTATCAATTGGGGTGGTGC
TATAAGCAGAGTCCCTAAAGACGAAACTGCCTTTTTTTGGCGCCATCCATTATTTTATACGGAATGGACGGCTAGTTGGA
AAAATAAATCACAAGAAGATTCAAATCTTGCATCAGTTGAAAGAGTGCGTCAGCTGATGCAACCATATGTAGCAGGTTCA
TATGTTAATGTTCCAGATCAAAACATTGAAAACTTCGGAAAAGAATATTATGGCGCAAACTTTGCGCGGCTTCGAGAAAT
AAAGGCGAAATATGACCCCGAAAATGTATTTCGTTTTCCGCAAAGCATCCCGCCATCTCGTTAA

Upstream 100 bases:

>100_bases
CGTATTATATTTATAGTTCGTAGATCATTTGTCTATGCGATTATCCAGCTCCTGCATATTTTAGTATCTGAATCGAATTT
CTTTGGGAGTGAAATAATAT

Downstream 100 bases:

>100_bases
AGTTTATTAAAGACAGAATCAATGACTCATACTAAAAAGCACTTGAATGGTTTCCGGTATCTTGTCTGTCGGGGTGCGAA
TCCCTTCAGTGCGTCCAATC

Product: spore coat protein; oxidoreductase

Products: NA

Alternate protein names: Spore coat protein yvdP

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MGSTQLTGRVIFKGDPGYTEAIKNWNPYVDVYPLVFVFAQNSYDVSNAIKWARENKVPLRVRSGRHALDKNLSVVSGGIV
IDVSDMNKVFLDEENAIATVQTGIPVGPLVKGLARDGFMAPFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVD
AKGRIIHADQSHNEDLLWASRGGGGGNFGYNTQYTFKVHRAPKTATVFNIIWPWEQLETVFKAWQKWAPFVDERLGCYLE
IYSKINGLCHAEGIFLGSKTELIRLLKPLLHAGTPTEADIKTLYYPDAIDFLDPDEPIPGRNDQSVKFSSAWGHDFWSDE
PISIMRKFLEDATGTEANFFFINWGGAISRVPKDETAFFWRHPLFYTEWTASWKNKSQEDSNLASVERVRQLMQPYVAGS
YVNVPDQNIENFGKEYYGANFARLREIKAKYDPENVFRFPQSIPPSR

Sequences:

>Translated_447_residues
MGSTQLTGRVIFKGDPGYTEAIKNWNPYVDVYPLVFVFAQNSYDVSNAIKWARENKVPLRVRSGRHALDKNLSVVSGGIV
IDVSDMNKVFLDEENAIATVQTGIPVGPLVKGLARDGFMAPFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVD
AKGRIIHADQSHNEDLLWASRGGGGGNFGYNTQYTFKVHRAPKTATVFNIIWPWEQLETVFKAWQKWAPFVDERLGCYLE
IYSKINGLCHAEGIFLGSKTELIRLLKPLLHAGTPTEADIKTLYYPDAIDFLDPDEPIPGRNDQSVKFSSAWGHDFWSDE
PISIMRKFLEDATGTEANFFFINWGGAISRVPKDETAFFWRHPLFYTEWTASWKNKSQEDSNLASVERVRQLMQPYVAGS
YVNVPDQNIENFGKEYYGANFARLREIKAKYDPENVFRFPQSIPPSR
>Mature_446_residues
GSTQLTGRVIFKGDPGYTEAIKNWNPYVDVYPLVFVFAQNSYDVSNAIKWARENKVPLRVRSGRHALDKNLSVVSGGIVI
DVSDMNKVFLDEENAIATVQTGIPVGPLVKGLARDGFMAPFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVDA
KGRIIHADQSHNEDLLWASRGGGGGNFGYNTQYTFKVHRAPKTATVFNIIWPWEQLETVFKAWQKWAPFVDERLGCYLEI
YSKINGLCHAEGIFLGSKTELIRLLKPLLHAGTPTEADIKTLYYPDAIDFLDPDEPIPGRNDQSVKFSSAWGHDFWSDEP
ISIMRKFLEDATGTEANFFFINWGGAISRVPKDETAFFWRHPLFYTEWTASWKNKSQEDSNLASVERVRQLMQPYVAGSY
VNVPDQNIENFGKEYYGANFARLREIKAKYDPENVFRFPQSIPPSR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Spore wall, spore coat

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVDP_BACSU (O06997)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   G70034
- RefSeq:   NP_391332.1
- ProteinModelPortal:   O06997
- SMR:   O06997
- EnsemblBacteria:   EBBACT00000001000
- GeneID:   936442
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34520
- NMPDR:   fig|224308.1.peg.3458
- GenoList:   BSU34520
- GeneTree:   EBGT00050000001202
- HOGENOM:   HBG672185
- OMA:   TATVFNI
- ProtClustDB:   CLSK887925
- BioCyc:   BSUB:BSU34520-MONOMER
- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- Gene3D:   G3DSA:3.30.43.10
- Gene3D:   G3DSA:3.30.465.20

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4; SSF56176 FAD-binding_2

EC number: NA

Molecular weight: Translated: 50085; Mature: 49954

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS51387 FAD_PCMH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSTQLTGRVIFKGDPGYTEAIKNWNPYVDVYPLVFVFAQNSYDVSNAIKWARENKVPLR
CCCCCEEEEEEEECCCCHHHHHHCCCCCEEHEEEEEEEECCCCCHHHHHHHHHCCCCCEE
VRSGRHALDKNLSVVSGGIVIDVSDMNKVFLDEENAIATVQTGIPVGPLVKGLARDGFMA
ECCCCHHHHCCCEEEECCEEEEECCCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCC
PFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVDAKGRIIHADQSHNEDLLWAS
CCCCCCCEEECCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCEEEEE
RGGGGGNFGYNTQYTFKVHRAPKTATVFNIIWPWEQLETVFKAWQKWAPFVDERLGCYLE
CCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHH
IYSKINGLCHAEGIFLGSKTELIRLLKPLLHAGTPTEADIKTLYYPDAIDFLDPDEPIPG
HHHHHCCCEEECEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC
RNDQSVKFSSAWGHDFWSDEPISIMRKFLEDATGTEANFFFINWGGAISRVPKDETAFFW
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHCCCCCCCCEEEE
RHPLFYTEWTASWKNKSQEDSNLASVERVRQLMQPYVAGSYVNVPDQNIENFGKEYYGAN
ECCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCC
FARLREIKAKYDPENVFRFPQSIPPSR
HHHHHHHHHCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GSTQLTGRVIFKGDPGYTEAIKNWNPYVDVYPLVFVFAQNSYDVSNAIKWARENKVPLR
CCCCEEEEEEEECCCCHHHHHHCCCCCEEHEEEEEEEECCCCCHHHHHHHHHCCCCCEE
VRSGRHALDKNLSVVSGGIVIDVSDMNKVFLDEENAIATVQTGIPVGPLVKGLARDGFMA
ECCCCHHHHCCCEEEECCEEEEECCCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCC
PFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVDAKGRIIHADQSHNEDLLWAS
CCCCCCCEEECCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCEEEEE
RGGGGGNFGYNTQYTFKVHRAPKTATVFNIIWPWEQLETVFKAWQKWAPFVDERLGCYLE
CCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHH
IYSKINGLCHAEGIFLGSKTELIRLLKPLLHAGTPTEADIKTLYYPDAIDFLDPDEPIPG
HHHHHCCCEEECEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC
RNDQSVKFSSAWGHDFWSDEPISIMRKFLEDATGTEANFFFINWGGAISRVPKDETAFFW
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHCCCCCCCCEEEE
RHPLFYTEWTASWKNKSQEDSNLASVERVRQLMQPYVAGSYVNVPDQNIENFGKEYYGAN
ECCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCC
FARLREIKAKYDPENVFRFPQSIPPSR
HHHHHHHHHCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377