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The map label for this gene is yvdQ

Identifier: 16080504

GI number: 16080504

Start: 3542179

End: 3542691

Strand: Reverse

Name: yvdQ

Synonym: BSU34510

Alternate gene names: 16080504

Gene position: 3542691-3542179 (Counterclockwise)

Preceding gene: 16080505

Following gene: 16080497

Centisome position: 84.04

GC content: 49.32

Gene sequence:

>513_bases
ATGGGTATTTTAAGCGGAAATCCGCAGGATGAACCGATGCATTACGGTGAGGTATTCGGCTTGTGGAGTTATGTGATGGC
GGGCAATAAAATGGTCGGCAATTACCAAATGCTATTGAATCATGTCGGTGATGACGACCTGAAGAAGCTGCTTCGTGAGT
CTATTGAGAAATGCCAAGATGAAATCAAACAGGTCAGCACGATCCTGAAAGAAAACGGGGTGGCGCTGCCGCCGGCTTCT
CCTGAACCGCCGACAGCAGATCTTAACGATATTCCGCCTGGTGCACGGTTTCTCGATCCGGATGTGGCGGCTTCCGCGGC
AGCAGAAAATGCTGCAGGTCTTGTGACATGCAGCAAAATGATGGGGCAATCGATTCGTGAGGATATTGCCATGATGTTTG
GGCAATTTCATATGTCGAAAGCGGCAACCGGCGCAAAATACTTAAGGCTGCTAAAAAACAAAGGCTGGCTCATCCCGCCG
CCGCTTCATCTTCAAAAACATCACGAAGCTTAA

Upstream 100 bases:

>100_bases
TTTTGTTTCATTTCATAAATCTTTTCCGCTGAAACATAAATGTTCCTCCGCTTGGGCACGTTATGAAATGTGCAATATTG
AATATGGGAGGAGAATGAGC

Downstream 100 bases:

>100_bases
TGGCAAAGGCATATACAGCTGTATATGCCTTGATTTTATGAAGATGACGTAAGACGCAGGCCGATGACGCCGGCTAGGAT
AAGGCAAAGTGAAATCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGILSGNPQDEPMHYGEVFGLWSYVMAGNKMVGNYQMLLNHVGDDDLKKLLRESIEKCQDEIKQVSTILKENGVALPPAS
PEPPTADLNDIPPGARFLDPDVAASAAAENAAGLVTCSKMMGQSIREDIAMMFGQFHMSKAATGAKYLRLLKNKGWLIPP
PLHLQKHHEA

Sequences:

>Translated_170_residues
MGILSGNPQDEPMHYGEVFGLWSYVMAGNKMVGNYQMLLNHVGDDDLKKLLRESIEKCQDEIKQVSTILKENGVALPPAS
PEPPTADLNDIPPGARFLDPDVAASAAAENAAGLVTCSKMMGQSIREDIAMMFGQFHMSKAATGAKYLRLLKNKGWLIPP
PLHLQKHHEA
>Mature_169_residues
GILSGNPQDEPMHYGEVFGLWSYVMAGNKMVGNYQMLLNHVGDDDLKKLLRESIEKCQDEIKQVSTILKENGVALPPASP
EPPTADLNDIPPGARFLDPDVAASAAAENAAGLVTCSKMMGQSIREDIAMMFGQFHMSKAATGAKYLRLLKNKGWLIPPP
LHLQKHHEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVDQ_BACSU (O06998)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   H70034
- RefSeq:   NP_391331.1
- ProteinModelPortal:   O06998
- SMR:   O06998
- EnsemblBacteria:   EBBACT00000001563
- GeneID:   936432
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34510
- NMPDR:   fig|224308.1.peg.3457
- GenoList:   BSU34510
- GeneTree:   EBGT00050000004475
- HOGENOM:   HBG534630
- OMA:   NDPEISA
- ProtClustDB:   CLSK695406
- BioCyc:   BSUB:BSU34510-MONOMER
- InterPro:   IPR021617
- InterPro:   IPR012347
- Gene3D:   G3DSA:1.20.1260.10

Pfam domain/function: PF11553 DUF3231

EC number: NA

Molecular weight: Translated: 18581; Mature: 18449

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILSGNPQDEPMHYGEVFGLWSYVMAGNKMVGNYQMLLNHVGDDDLKKLLRESIEKCQD
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EIKQVSTILKENGVALPPASPEPPTADLNDIPPGARFLDPDVAASAAAENAAGLVTCSKM
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
MGQSIREDIAMMFGQFHMSKAATGAKYLRLLKNKGWLIPPPLHLQKHHEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GILSGNPQDEPMHYGEVFGLWSYVMAGNKMVGNYQMLLNHVGDDDLKKLLRESIEKCQD
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EIKQVSTILKENGVALPPASPEPPTADLNDIPPGARFLDPDVAASAAAENAAGLVTCSKM
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
MGQSIREDIAMMFGQFHMSKAATGAKYLRLLKNKGWLIPPPLHLQKHHEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377