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The map label for this gene is epsH

Identifier: 16080483

GI number: 16080483

Start: 3521111

End: 3522145

Strand: Reverse

Name: epsH

Synonym: BSU34300

Alternate gene names: 16080483

Gene position: 3522145-3521111 (Counterclockwise)

Preceding gene: 16080484

Following gene: 16080482

Centisome position: 83.55

GC content: 47.44

Gene sequence:

>1035_bases
ATGGAAACACCTGCGGTTAGTCTGTTAGTCGCTGTTTATAACACAGAAACATATATCAGAACGTGTCTCGAATCACTGCG
GAACCAGACAATGGACAATATTGAAATCATCATTGTCAATGACGGTTCAGCTGACGCCAGCCCGGATATCGCAGAAGAAT
ACGCCAAAATGGACAACAGGTTCAAGGTGATTCATCAGGAAAACCAGGGACTCGGTGCGGTTCGGAATAAAGGCATTGAA
GCTGCACGCGGCGAATTTATCGCGTTTATCGATTCAGACGATTGGATTGAGCCTGATTATTGCGAGCAGATGCTCCGGAC
AGCAGGCGATGAAACTGATCTGGTCATTTGCAATTACGCCGCAGAGTTTGAGGACACTGGCAAAACCATGGACTCTGACA
TTGCCCAAACCTATCAGGATCAGCCGAAGGAGCACTATATCAAGGCGTTATTCGAAGGGAAGGTCAGAGGGTTTTCATGG
AACAAACTGTACAGAAGAAGCATGATTGAAGCCCATCGGCTGTCGTTTCCGCTCCGAGGCGAGCTGGAGCATGTCGAGGA
TCAGTTTTTCAGCTTCAGGGCTCATTTTTTCGCCCGCTCAGTATCCTACGTAAAAACGCCGCTCTATCATTATCGAATTC
ACCTTTCCTCCATTGTGCAGCGCTATCAGAAAAAATTGTTTGAATCAGGACTTGCGCTGTATGAGACGAATGCGGCGTTT
TTACAGGAGAACAACAAACTGGAGGAGTATCGCAAGGAGCTTGATACCTTTATCGTTCTTCACAGCAGCATCTGTATGCT
GAATGAATGGAAAACGAGCGGCAGCCGCCGGCTGTTTGAAAAGCTTAGAAATGTTGGCGTGATATGCGCGGACCCGGTGT
TTCAAGAAAGTCTTTCAAAAACGGGTACTGCTCCTTTTGACGCAAAACGGTCATGCCTGCTTCTGATGGCGAAATACAGA
ATGATTCCGTTCGTCGCTATGGCATCGGCTGTGTATCAGCGGGTGATCGAGTACAAAATGAGAAACAGAGGGTGA

Upstream 100 bases:

>100_bases
TTATTTTCTTTACAGTTATTTGCTTATGCCGGTCGATTCATCGGTTCTGCCTTACAGAACGATTTTTTCCCGGTAATTTA
TGCACGAGGAGCCGGTCATT

Downstream 100 bases:

>100_bases
GGACATGTCGTTACAATCGTTGAAAATCAATTTTGCAGAATGGCTGCTGCTAAAGGTCAAATACCCGTCCCAATATTGGC
TGGGAGCGGCAGATCAACCG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
METPAVSLLVAVYNTETYIRTCLESLRNQTMDNIEIIIVNDGSADASPDIAEEYAKMDNRFKVIHQENQGLGAVRNKGIE
AARGEFIAFIDSDDWIEPDYCEQMLRTAGDETDLVICNYAAEFEDTGKTMDSDIAQTYQDQPKEHYIKALFEGKVRGFSW
NKLYRRSMIEAHRLSFPLRGELEHVEDQFFSFRAHFFARSVSYVKTPLYHYRIHLSSIVQRYQKKLFESGLALYETNAAF
LQENNKLEEYRKELDTFIVLHSSICMLNEWKTSGSRRLFEKLRNVGVICADPVFQESLSKTGTAPFDAKRSCLLLMAKYR
MIPFVAMASAVYQRVIEYKMRNRG

Sequences:

>Translated_344_residues
METPAVSLLVAVYNTETYIRTCLESLRNQTMDNIEIIIVNDGSADASPDIAEEYAKMDNRFKVIHQENQGLGAVRNKGIE
AARGEFIAFIDSDDWIEPDYCEQMLRTAGDETDLVICNYAAEFEDTGKTMDSDIAQTYQDQPKEHYIKALFEGKVRGFSW
NKLYRRSMIEAHRLSFPLRGELEHVEDQFFSFRAHFFARSVSYVKTPLYHYRIHLSSIVQRYQKKLFESGLALYETNAAF
LQENNKLEEYRKELDTFIVLHSSICMLNEWKTSGSRRLFEKLRNVGVICADPVFQESLSKTGTAPFDAKRSCLLLMAKYR
MIPFVAMASAVYQRVIEYKMRNRG
>Mature_344_residues
METPAVSLLVAVYNTETYIRTCLESLRNQTMDNIEIIIVNDGSADASPDIAEEYAKMDNRFKVIHQENQGLGAVRNKGIE
AARGEFIAFIDSDDWIEPDYCEQMLRTAGDETDLVICNYAAEFEDTGKTMDSDIAQTYQDQPKEHYIKALFEGKVRGFSW
NKLYRRSMIEAHRLSFPLRGELEHVEDQFFSFRAHFFARSVSYVKTPLYHYRIHLSSIVQRYQKKLFESGLALYETNAAF
LQENNKLEEYRKELDTFIVLHSSICMLNEWKTSGSRRLFEKLRNVGVICADPVFQESLSKTGTAPFDAKRSCLLLMAKYR
MIPFVAMASAVYQRVIEYKMRNRG

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

Organism=Escherichia coli, GI1790044, Length=221, Percent_Identity=33.0316742081448, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EPSH_BACSU (P71057)

Other databases:

- EMBL:   Z71928
- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   G70036
- RefSeq:   NP_391310.1
- ProteinModelPortal:   P71057
- SMR:   P71057
- EnsemblBacteria:   EBBACT00000003907
- GeneID:   938630
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34300
- NMPDR:   fig|224308.1.peg.3436
- GenoList:   BSU34300
- GeneTree:   EBGT00050000000531
- HOGENOM:   HBG338335
- OMA:   SISHNIK
- PhylomeDB:   P71057
- ProtClustDB:   CLSK887910
- BioCyc:   BSUB:BSU34300-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39810; Mature: 39810

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPAVSLLVAVYNTETYIRTCLESLRNQTMDNIEIIIVNDGSADASPDIAEEYAKMDNR
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCC
FKVIHQENQGLGAVRNKGIEAARGEFIAFIDSDDWIEPDYCEQMLRTAGDETDLVICNYA
EEEEEECCCCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECH
AEFEDTGKTMDSDIAQTYQDQPKEHYIKALFEGKVRGFSWNKLYRRSMIEAHRLSFPLRG
HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ELEHVEDQFFSFRAHFFARSVSYVKTPLYHYRIHLSSIVQRYQKKLFESGLALYETNAAF
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHH
LQENNKLEEYRKELDTFIVLHSSICMLNEWKTSGSRRLFEKLRNVGVICADPVFQESLSK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCHHHHHHHHH
TGTAPFDAKRSCLLLMAKYRMIPFVAMASAVYQRVIEYKMRNRG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METPAVSLLVAVYNTETYIRTCLESLRNQTMDNIEIIIVNDGSADASPDIAEEYAKMDNR
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCC
FKVIHQENQGLGAVRNKGIEAARGEFIAFIDSDDWIEPDYCEQMLRTAGDETDLVICNYA
EEEEEECCCCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECH
AEFEDTGKTMDSDIAQTYQDQPKEHYIKALFEGKVRGFSWNKLYRRSMIEAHRLSFPLRG
HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ELEHVEDQFFSFRAHFFARSVSYVKTPLYHYRIHLSSIVQRYQKKLFESGLALYETNAAF
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHH
LQENNKLEEYRKELDTFIVLHSSICMLNEWKTSGSRRLFEKLRNVGVICADPVFQESLSK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCHHHHHHHHH
TGTAPFDAKRSCLLLMAKYRMIPFVAMASAVYQRVIEYKMRNRG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377